Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_14339
Subject:
NM_001289952.1
Aligned Length:
2238
Identities:
170
Gaps:
2059

Alignment

Query    1  ATGGC-TCTCCTCAGGGTCTATTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  73
            ||||| |.|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCTTTTTCTCAGGGTCTATTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74

Query   74  GGACCCTGCTCAGAGGACTCTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCT--------  139
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct   75  GGACCCTGCTCAGAGGACTCTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATATCT  148

Query  140  -------------------GGAGTTGT-------------------CAGGGGAGTG-TCCAT----TGACA--G  168
                               ||||||.|                   |||.|.|||| |||||    .||||  |
Sbjct  149  CTTCCAAATGCACGATGAAGGAGTTCTTGTCAACAGCGCAAGGCAACAGAGAAGTGTTCCATGCAGGGACATTG  222

Query  169  C----ACCTG-----CCTCC------------------------------------------------------  179
            |    ||.||     |.||.                                                      
Sbjct  223  CAAATACATGAAAGTCATCACAATGGAGATTTTTGCTACCAGGATGTTGATAAAGATATTCATGACTATGAATT  296

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  297  TCAATGGCAAGAAGATGAAAGAAATGGCCATGAAGCACCCATGACAAAAATCAAAAAGTTGACAGGTATTACAG  370

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  371  AACGATATGATCAAAGTCATGCTAGAAACAAGCCTATTAAAGATCAGCTTGGATCAAGCTTTCATTCGCATCTG  444

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  445  CCTGAAATGCACATATTTCAGACCGAAGAGAAAATTGATAATCAAGTTGTGAAGTCTGTCCACGATGCTTCCTT  518

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  519  GGTTTCAACAGCCCAAAGAATTTCTTGTAGGCCCAAAACCCATATATCTAATAACCATGGGAATAATTTCTGGA  592

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  593  ATTCTTCATTACTCACACAAAAACAGGAAGTACACATGAGAGAAAAATCTTTCCAATGTAATGAGAGTGGCAAA  666

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  667  GCCTTTAATTACAGCTCACTCTTAAGGAAACATCAGATAATCCATTTAGCAGACAAATATAAATGTGATGTATG  740

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  741  TGGCAAGCTCTTTAATCAGAAGCGAAACCTAGCATGCCATCGTAGATGTCACACTGGTGAGAATCCTTACAAGT  814

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  815  GTAATGAGTGTGGCAAGACCTTCAGTCAGACGTCATCCCTTACATGCCATCGTAGACTTCATACTGGAGAGAAA  888

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  889  CCTTACAAATGTGAAGAATGTGACAAAGCTTTCCATTTCAAATCAATACTTGAAAGACATAGGATAATTCATAC  962

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct  963  TGAAGAGAAACCATATAAGTGTAATGAGTGTGGCAAGACCTTTAGGCAGAAGTCAATCCTTACACGCCATCATC  1036

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1037  GACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTTAGTCACAAGTCATCCCTTACA  1110

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1111  TGCCATCATAGACTTCATACTGGAGAGAAACCCTACAAATGTAATGAGTGTGGCAAGACCTTTAGTCACAAGTC  1184

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1185  ATCCCTTACATGCCATCGTAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGCTTACA  1258

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1259  GTTTCAGATCAAATTTTGAAATACATCGGAAAATTCATACTGAAGACAATGCTTACAAGTGTAATGAGTGTGGA  1332

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1333  AAGACCTTTAGCCGGACATCATCCCTTACATGCCATCGTAGACGTCATACTGGAGAGCAACCTTACAAATGTGA  1406

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1407  AGAATGTGACAAAGCTTTCCGTTTCAAATCAAACCTTGAAAGACATAGGAGAATTCATACTGGAGAGAAACCAT  1480

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1481  ACAAGTGTAATGAGTGTGGCAAGACCTTTAGTCGGAAGTCATACCTCACATGCCATCATAGACTTCATACTGGA  1554

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1555  GAGAAAGCTTACAAGTGTAATGAGTGCGGCAAGACCTTTAGTTGGAAGTCATCCCTTACCTGCCATCGTAGACT  1628

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1629  TCATTCTGGAGAGAAACCTTACAAGTGTAAGGAGTGTGGCAAGACCTTCAATCAGCAGTTAACCCTTAAACGCC  1702

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1703  ATCGTAGACTTCATAGTGGAGAGAACCCTTACAAATGTGAAGATAGTGACAAAGCTTACAGTTTCAAATCAAAC  1776

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1777  CTTGAAATACATCAGAAAATTCATACTGAAGAGAATCCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCG  1850

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1851  GACGTCATCCCTTACATGCCATCGTAGACTTCATACCGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAG  1924

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1925  CTTTCCGTGTGAAATCAAACCTTGAAGGACATAGGAGAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAG  1998

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 1999  TGTGGCAAGACCTTTAGTCGGAAGTCATATTTTATATGCCATCATAGACTTCATACTGGAGAGAAACCTTATAA  2072

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2073  GTGTAATGAGTGTGGCAAGAACTTTAGTCAGAAGTCATCCCTTATATGCCACCATAGACTTCATACTGGAGAGA  2146

Query  180  --------------------------------------------------------------------------  179
                                                                                      
Sbjct 2147  AACCTTACAAGTGTAATGAGTGTGGCAAGACCTTTAGTCAGAAGTCAAACCTTACATGCCATCGTAGACTTCAT  2220

Query  180  ------------------  179
                              
Sbjct 2221  ACTGGAGAAAAACAAGTG  2238

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