Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_14905
- Subject:
- NR_146512.2
- Aligned Length:
- 2780
- Identities:
- 1223
- Gaps:
- 1552
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTAGCACCGCCTCTTCCGCGTTCTCGGAGGAGCGATCTGCAGGTTTCCATGTCAGAGGCCGATGGAGAACTGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GATTGCCACCTACGCACAAAGGCCATTGAGACACTTCGTGTAGCTGGAAGACACCAACTTCCTGACAGGAGCTT 148
Query 1 ----------------------------ATGGTATCTTCTCAAAAGTTGGAAAAACCTATAGAGATGGGCAGTA 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TATTTCATTTGGGATTTCAAGTTTACAGATGGTATCTTCTCAAAAGTTGGAAAAACCTATAGAGATGGGCAGTA 222
Query 47 GCGAACCCCTTCCCATCGCAGATGGTGACAGGAGGAGGAAGAAGAAGCGGAGGGGCCGGGCCACTGACTCCTTG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCGAACCCCTTCCCATCGCAGATGGTGACAGGAGGAGGAAGAAGAAGCGGAGGGGCCGGGCCACTGACTCCTTG 296
Query 121 CCAGGAAAGTTTGAAGATATGTACAAGCTGACCTCTGAATTGCTTGGAGAGGGAGCCTATGCCAAAGTTCAAGG 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCAGGAAAGTTTGAAGATATGTACAAGCTGACCTCTGAATTGCTTGGAGAGGGAGCCTATGCCAAAGTTCAAGG 370
Query 195 TGCCGTGAGCCTACAGAATGGCAAAGAGTATGCCGTCAAAATCATCGAGAAACAAGCAGGGCACAGTCGGAGTA 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGCCGTGAGCCTACAGAATGGCAAAGAGTATGCCGTCAAAATCATCGAGAAACAAGCAGGGCACAGTCGGAGTA 444
Query 269 GGGTGTTTCGAGAGGTGGAGACGCTGTATCAGTGTCAGGGAAACAAGAACATTTTGGAGCTGATTGAGTTCTTT 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGGTGTTTCGAGAGGTGGAGACGCTGTATCAGTGTCAGGGAAACAAGAACATTTTGGAGCTGATTGAGTTCTTT 518
Query 343 GAAGATGACACAAGGTTTTACTTGGTCTTTGAGAAATTGCAAGGAGGTTCCATCTTAGCCCACATCCAGAAGCA 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAAGATGACACAAGGTTTTACTTGGTCTTTGAGAAATTGCAAGGAGGTTCCATCTTAGCCCACATCCAGAAGCA 592
Query 417 AAAGCACTTCAATGAGCGAGAAGCCAGCCGAGTGGTGCGGGACGTTGCTGCTGCCCTTGACTTCCTGCATACCA 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAAGCACTTCAATGAGCGAGAAGCCAGCCGAGTGGTGCGGGACGTTGCTGCTGCCCTTGACTTCCTGCATACCA 666
Query 491 AAGACAAAGTCTCTCTCTGTCACCTAGGCTGGAGTGCTATGGCGCCATCAGGGCTCACTGCAGCCCCAACCTCC 564
|||.||
Sbjct 667 AAGGCA-------------------------------------------------------------------- 672
Query 565 CTGGGCTCCAGTGATCCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACANGCATTTGCTCATNGTGATNTGA 638
||||||||.|||||.|||
Sbjct 673 --------------------------------------------------------TTGCTCATCGTGATCTGA 690
Query 639 AACCAAGNAAAATATATTGTGTGAATCTCCAGGAAAAGGTGTCTCCAGTGAAAAATCTGTGACTTTGACTTGGG 712
||||| .||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct 691 AACCA--GAAAATATATTGTGTGAATCTCCA-GAAAAGGTGTCTCCAGTG-AAAATCTGTGACTTTGACTTGGG 760
Query 713 CAGTGGGATGAAACTGAACAACTCCTTGTACCCCCATAACCACACCAGAGCTGACCACCCCATGTGGCTCTGCA 786
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 761 CAGTGGGATGAAACTGAACAACTCC-TGTACCCCCATAACCACACCAGAGCTGACCACCCCATGTGGCTCTGCA 833
Query 787 GAATACATGGCCCCTGAAGGTAGTNGAGGTCTTCACGGACCAGGCCACATTCTACGACAAGCGCTGTGACCTGT 860
|||||||||||||||| |||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 834 GAATACATGGCCCCTG-AGGTAGTGGAGGTCTTCACGGACCAGGCCACATTCTACGACAAGCGCTGTGACCTGT 906
Query 861 GGAGCCTGGGCGTGGTCCTCTACATCATGCTGAGTGGCTACCCACCCTTCGTGGGTCACTGCGGGGCCGACTGT 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 GGAGCCTGGGCGTGGTCCTCTACATCATGCTGAGTGGCTACCCACCCTTCGTGGGTCACTGCGGGGCCGACTGT 980
Query 935 GGCTGGGACCGGGGCGAGGTCTGCAGGGTGTGCC-------------------------------AGAACAAGC 977
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct 981 GGCTGGGACCGGGGCGAGGTCTGCAGGGTGTGCCAGTGTGGCCTCAGGAGGAATCTTTTGTACCTAGAACAAGC 1054
Query 978 TGTTTGAAAGCATCCAGGAAGGCAAGTATGAGTTTCCTGACAAGGACTGGGCACACATCTCCAGTGAAGCCAAA 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1055 TGTTTGAAAGCATCCAGGAAGGCAAGTATGAGTTTCCTGACAAGGACTGGGCACACATCTCCAGTGAAGCCAAA 1128
Query 1052 GACCTCATCTCCAAGCTCCTGGTGCGAGATGCAAAGCAGAGACTTAGCGCCGCCCAAGTTCTGCAGCACCCATG 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1129 GACCTCATCTCCAAGCTCCTGGTGCGAGATGCAAAGCAGAGACTTAGCGCCGCCCAAGTTCTGCAGCACCCATG 1202
Query 1126 GGTGCAGGGGCAAGCTCCAGAAAAGGGACTCCCCACGCCGCAAGTCCTCCAGAGGAACAGCAGCACAATGGACC 1199
||||||||| |||||||||||||||||||||
Sbjct 1203 GGTGCAGGG--------------------------------------------GGAACAGCAGCACAATGGACC 1232
Query 1200 TGACGCTCTTCGCAGCTGAGGCCATCGCCCTTAACCGCCAGCTATCTCAGCACGAAGAGAACGAACTAGCAGAG 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1233 TGACGCTCTTCGCAGCTGAGGCCATCGCCCTTAACCGCCAGCTATCTCAGCACGAAGAGAACGAACTAGCAGAG 1306
Query 1274 GAGCCAGAGGCACTAGCTGATGGCCTCTGCTCCATGAAGCTTTCCCCTCCCTGCAAGTCACGCCTGGCCCGGAG 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1307 GAGCCAGAGGCACTAGCTGATGGCCTCTGCTCCATGAAGCTTTCCCCTCCCTGCAAGTCACGCCTGGCCCGGAG 1380
Query 1348 ACGGGCCCTGGCCCAGGCAGGCCGTGGTGAAGACAGGAGCCCGCCCACAGCACTC------------------- 1402
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381 ACGGGCCCTGGCCCAGGCAGGCCGTGGTGAAGACAGGAGCCCGCCCACAGCACTCTGAAATGCTCCAGTCACAC 1454
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1455 CTTATAGGCCCTAGGCCTGGCCAGGCATTGTCCCCTGGAAACCTGTGTGGCTAAAGTCTGCTGAGCAGGCAGCA 1528
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1529 GCCTCTGCTCTGTGGCTCCATTCAGGCTTTTTCATCTACGAAGGCCCTGAGGTTCCCATCAACCCCCATTTCCC 1602
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1603 TAGGGTCCTGGAGGAAAAAGCTTTTTCCAAAGGGGTTGTCTTTGAAAAGGAAAGCAATCACTTCTCACTTTGCA 1676
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1677 TAATTGCCTGCAGCAGGAACATCTCTTCACTGGGCTCCACCTGCTCACCCGCCTGCAGATCTGGGATCCAGCCT 1750
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1751 GCTCTCACCGCTGTAGCTGTGGCGGCTGGGGCTGCAGCCTGCAGGGAGAAGCAAGAAGCATCAGTTGACAGAGG 1824
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1825 CTGCCGACACGTGCCTCTTCCCTCTCTTCTCTGTCACCCTCCTCTGGCGGTCCTTCCACCTTCCTCTGTCCTCC 1898
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1899 GGATGTCCTCTTTGCCCGTCTTCTCCCTTGGCTGAGCAAAGCCATCCCCTCAATTCAGGGAAGGGCAAGGAGCC 1972
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 1973 TTCCTCATTCAGGAAATCAAATCAGTCTTCCGGTCTGCAGCACGGAAAAGCACATAATCTTTCTTTGCTGTGAC 2046
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 2047 TGAAATGTATCCCTCGTTTATCATCCCCTTTGTTTGTGATTGCTGCTAAAGTCAGTAGTATCGTTTTTTTAAAA 2120
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 2121 AAAAAGTTTGGTGTTTTTAACCATGCTGTTCCAGCAAAGATGATACCTTAAACTCCCACTGCAAGCCCATGAAC 2194
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 2195 TTCCCAGAGAGTGGAACGGCTTGCTCTTCTTTCTAGAATGTCCATGCACTTGGGTTTTAATCAGCAGTTCCCTA 2268
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 2269 TTATTCTGATTTTAAGCTGTTCCTGTGATGAACTTAGAGACAGCATCGGTGTCTGCTGCTGTGTCCCCAGGTCT 2342
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 2343 TGTGTGGGTGGCACAGATCTGGGCAGTTAGATAGTGCTCTGTGCCTAAGGTGAAGCCACACTAGGGTGAAGCCT 2416
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 2417 CACTTCCCTGTTTGAGCAATGCAGTGCCTGCTGCCCGTGTGCATGAAGGTACAGCCATTCAGATAAGTGGAACT 2490
Query 1403 -------------------------------------------------------------------------- 1402
Sbjct 2491 ATTGAGTTACATAAAGAAAATAGATTTGCATTTGTCAGGCAGACGTTTATACAACACCACGGTGCTTTTATACA 2564
Query 1403 ------------------------------------------ 1402
Sbjct 2565 TTGTGCTTATTTTAATAAAACTGAAATTCTATGTGTGGCCTA 2606
