Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15256
Subject:
NM_001099694.2
Aligned Length:
1770
Identities:
1087
Gaps:
675

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTTACATGAGGAAGCAGCTCAGAAGAGGAAAGGAAAGGAGCCAGGCATGGCTCTTCCTCAGGGACGCTTGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTTCAGGGATGTGGCTATAGAATTCTCATTGGCAGAGTGGAAATTCCTGAACCCTGCGCAGAGGGCTTTGTACA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGAAGTGATGTTGGAGAACTACAGGAACCTGGAGGCTGTGGATATCTCTTCCAAACGCATGATGAAGGAGGTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTGTCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGGATGTTGCAAAGACATGAAAGTTATCACACTGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGATTTTTGCTTCCAGGAAATTGAAAAAGATATTCATGACTTTGAGTTTCAGTCACAAAAAGATGAAAGAAATG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCCATGAAGCATCCATGCCAAAAATCAAAGAGTTGATGGGTAGCACAGACCGACATGATCAAAGGCATGCTGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AACAAGCCTATTAAAGATCAGCTTGGATTAAGCTTTCATTTGCATCTTCCTGAACTCCACATATTTCAGCCCGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGAGAAAATTGCTAATCAAGTGGAGAAGTCTGTCAACGATGCTTCCTCAATTTCAACATCCCAAAGAATTTCTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTAGGCCTGAAACACATACTCCTAATAACTATGGGAATAATTTTTTCCATTCATCATTACTCACACAAAAACAG  666

Query    1  ---------ATGAGAGAAAAATCTTTCCAATGTAATGAGACTGGCAAAGCCTTTAATTGTAGCTCATTTGTAAG  65
                     ||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct  667  GAAGTACACATGAGAGAAAAATCTTTCCAATGTAATGAGACTGGCGAAGCCTTTAATTGTAGCTCATTTGTAAG  740

Query   66  GAAACATCAGATAATCCATTTAGGAGAAAAACAATATAAATTTGATATATGTGGCAAAGTCTTTAATGAGAAGC  139
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GAAACATCAGATAATCCATTTAGGAGAAAAACAATATAAATTTGATATATGTGGCAAAGTCTTTAATGAGAAGC  814

Query  140  GATACCTTGCACGCCATCGTAGATGTCACACTAGTGAGAAACCTTACAAGTGTAATGAATGTGGAAAGTCCTTC  213
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GATACCTTGCACGCCATCGTAGATGTCACACTAGTGAGAAACCTTACAAGTGTAATGAATGTGGAAAGTCCTTC  888

Query  214  AGTTACAAGTCATCCCTGACATGCCATCGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAATGTGG  287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGTTACAAGTCATCCCTGACATGCCATCGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAATGTGG  962

Query  288  AAAGTCCTTCAGTTACAAGTCATCCCTTACATGCCATCATAGGTGTCACACTGGTGAGAAACCTTACAAGTGTA  361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AAAGTCCTTCAGTTACAAGTCATCCCTTACATGCCATCATAGGTGTCACACTGGTGAGAAACCTTACAAGTGTA  1036

Query  362  ATGAATGTGGAAAGTCCTTCAGTTACAAGTCATCCCTTAGATGCCATCGTAGACTTCATACTGGAATAAAACCT  435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ATGAATGTGGAAAGTCCTTCAGTTACAAGTCATCCCTTAGATGCCATCGTAGACTTCATACTGGAATAAAACCT  1110

Query  436  TACAAGTGTAATGAGTGTGGCAAGATGTTTGGTCAAAATTCAACCCTTGTAATTCATAAGGCAATTCATACTGG  509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TACAAGTGTAATGAGTGTGGCAAGATGTTTGGTCAAAATTCAACCCTTGTAATTCATAAGGCAATTCATACTGG  1184

Query  510  AGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGCTTTTAATCAACAATCACACCTTTCACGTCATCATAGAC  583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGCTTTTAATCAACAATCACACCTTTCACGTCATCATAGAC  1258

Query  584  TTCATACTGGAGAGAAACCTTACAAGTGTAATGACTGTGGTAAGGCTTTTATTCATCAGTCAAGCCTTGCATGT  657
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1259  TTCATACTGGAGAGAAACCTTACAAGTGTAATGACTGTGGTAAGGCTTTTATTCATCAGTCAAGCCTTGCACGT  1332

Query  658  CATCATTGNCTTCATACTGGAGAGAAATCTTACAAATGTGAAGAATGTGACAGGGTTTTCAGTCAGAAATCAAA  731
            ||||||.|.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 1333  CATCATAGACTTCATACTGGAGAGAAATCTTACAAATGTGAAGAATGTGACAGAGTTTTCAGTCAGAAATCAAA  1406

Query  732  CCTTGAGAGACACAAGATAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTCACAAGACCTTCAGTC  805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CCTTGAGAGACACAAGATAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTCACAAGACCTTCAGTC  1480

Query  806  ACAGGTCATCTCTTCCATGCCATCGTAGACTTCATAGTGGTGAGAAACCTTACAAGTGTAATGAATGTGGGAAG  879
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  ACAGGTCATCTCTTCCATGCCATCGTAGACTTCATAGTGGTGAGAAACCTTACAAGTGTAATGAATGTGGGAAG  1554

Query  880  ACTTTTAATGTACAGTCACACCTTTCACGTCATCATAGACTTCATACTGGAGAGAAACCTTACAAATGTAAGGT  953
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  ACTTTTAATGTACAGTCACACCTTTCACGTCATCATAGACTTCATACTGGAGAGAAACCTTACAAATGTAAGGT  1628

Query  954  TTGTGACAAGGCTTTCATGTGCCATTCTTATCTGGCAAACCATACTAGAATTCATAGCGGAGAGAAACCTTACA  1027
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TTGTGACAAGGCTTTCATGTGCCATTCTTATCTGGCAAACCATACTAGAATTCATAGCGGAGAGAAACCTTACA  1702

Query 1028  AGTGTAATGAGTGTGGTAAGGCTCACAATCACTTGTTTTATTCATCAGTCAAGCCTTGCATGTCATCA  1095
            |||||||||||||||||||||||||||||||||||.||.||||||||.||||||||||||||||||||
Sbjct 1703  AGTGTAATGAGTGTGGTAAGGCTCACAATCACTTGATTGATTCATCAATCAAGCCTTGCATGTCATCA  1770

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