Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15496
Subject:
NM_020007.4
Aligned Length:
1200
Identities:
918
Gaps:
228

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTGTTAGTGTCACACCAATTCGGGACACAAAATGGCTAACACTGGAAGTATGTAGAGAGTTTCAAAGGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GACTTGCTCACGACCAGACACGGAATGTAAATTTGCACATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACGAG  148

Query    1  -----------------------ATGGGCCGTTGCTCCAGGGAGAACTGCAAATATCTTCATCCACCCCCACAT  51
                                   |..||.|||||||||||.||||||||||||||||||||||||||||||||.
Sbjct  149  TAATCGCCTGCTTTGATTCACTGAAAGGTCGTTGCTCCAGAGAGAACTGCAAATATCTTCATCCACCCCCACAC  222

Query   52  TTAAAAACGCAGTTGGAGATAAATGGACGCAATAACTTGATTCAGCAGAAGAACATGGCCATGTTGGCCCAGCA  125
            ||||||||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||||||.||||||||||
Sbjct  223  TTAAAAACACAGTTAGAGATAAATGGGCGGAATAACTTGATTCAGCAGAAGAACATGGCCATGCTGGCCCAGCA  296

Query  126  AATGCAACTAGCCAATGCCATGATGCCTGGTGCCCCATTACAACCCGTGCCAATGTTTTCAGTTGCACCAAGCT  199
            ||||||..|||||||||||||||||||.||||||||.||.||.|||||||||||||||||||||||||||||||
Sbjct  297  AATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGCCAATGTTTTCAGTTGCACCAAGCT  370

Query  200  TAGCCACCAATGCATCAGCAGCCGCCTTTAATCCCTATCTGGGACCTGTTTCTCCAAGCCTGGTCCCGGCAGAG  273
            |||||||||.||||||||||   ||||||||.||.||.|||||.||||||||.|||||||||||.||.||||||
Sbjct  371  TAGCCACCAGTGCATCAGCA---GCCTTTAACCCTTACCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCAGAG  441

Query  274  ATCTTGCCGACTGCACCAATGTTGGTTACAGGGAATCCGGGTGTCCCTGTACCTGCAGCTGCTGCAGCTGCTGC  347
            ||||||||||||||||||||||||||.||.||||||||.||.||.||.||.||.||||||||.|||||||||||
Sbjct  442  ATCTTGCCGACTGCACCAATGTTGGTCACGGGGAATCCTGGAGTTCCAGTGCCAGCAGCTGCCGCAGCTGCTGC  515

Query  348  ACAGAAATTAATGCGAACAGACAGACTTGAGGTATGTCGAGAGTACCAACGTGGCAATTGCAACCGAGGAGAAA  421
            ||||||.||||||||.|||||||||||.|||||.||||||||||||||.|||||||||||||||.|||||||||
Sbjct  516  ACAGAAGTTAATGCGGACAGACAGACTGGAGGTGTGTCGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGAAA  589

Query  422  ATGATTGTCGGTTTGCTCATCCTGCTGACAGCACAATGATTGACACCAATGACAACACAGTCACTGTGTGTATG  495
            ||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||.|||
Sbjct  590  ATGACTGTCGGTTTGCTCATCCTGCTGACAGCACAATGATTGATACCAATGACAACACAGTCACTGTCTGCATG  663

Query  496  GATTACATCAAAGGGAGATGCTCTCGGGAAAAGTGCAAATACTTTCATCCCCCTGCACATTTGCAAGCCAAGAT  569
            |||||||||||.||||||||||||||||||||||||||||||||.|||||.||.|||||..|||||||||||||
Sbjct  664  GATTACATCAAGGGGAGATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTCCCGCACACCTGCAAGCCAAGAT  737

Query  570  CAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCTGCACAGGCTGCAGCCACCGCAGCTGCCATGACTCAGT  643
            ||||||||||||||||||||||||||||||||||||.||||||||||||||.||.||||||||||         
Sbjct  738  CAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACTGCAGCTGCCA---------  802

Query  644  CGGCTGTCAAATCACTGAAGCGACCCCTCGAGGCAACCTTTGACCTGGGAATTCCTCAAGCTGTACTTCCCCCA  717
                                                         |||||||||||||||||||||||||||||
Sbjct  803  ---------------------------------------------TGGGAATTCCTCAAGCTGTACTTCCCCCA  831

Query  718  TTACCAAAGAGGCCTGCTCTTGAAAAAACCAACGGTGCCACCGCAGTCTTTAACACTGGTATTTTCCAATACCA  791
            ||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  832  TTGCCAAAGAGGCCTGCTCTTGAAAAAACCAACGGTGCCACCGCAGTCTTTAACACTGGTATTTTCCAATACCA  905

Query  792  ACAGGCTCTAGCCAACATGCAGTTACAACAGCATACAGCATTTCTCCCACCAGGCTCAATATTGTGCATGACAC  865
            |||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  906  ACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGGCTCAATATTGTGCATGACAC  979

Query  866  CCGCTACAAGTGTTGTTCCCATGGTGCACGGTGCTACGCCAGCCACTGTGTCCGCAGCAACAACATCTGCCACA  939
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  980  CCGCTACAAGTGTTGTTCCCATGGTGCACGGTGCTACGCCAGCCACTGTGTCCGCAGCAACAACATCTGCCACA  1053

Query  940  AGTGTTCCCTTCGCTGCAACAGCCACAGCCAACCAGATACCCATAATATCTGCCGAACATCTGACTAGCCACAA  1013
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1054  AGTGTTCCCTTCGCTGCAACAGCCACAGCCAACCAGATACCCATAATATCTGCCGAACATCTGACTAGCCACAA  1127

Query 1014  GTATGTTACCCAGATG  1029
            ||||||||||||||||
Sbjct 1128  GTATGTTACCCAGATG  1143

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