Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15496
Subject:
XM_006501778.1
Aligned Length:
1311
Identities:
852
Gaps:
405

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTGTTAGTGTCACACCAATTCGGGACACAAAATGGCTAACACTGGAAGTATGTAGAGAGTTTCAAAGGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GACTTGCTCACGACCAGACACGGAATGTAAATTTGCACATCCTTCGAAAAGCTGCCAAGTTGAAAATGGACGAG  148

Query    1  -----------------------ATGGGCCGTTGCTCCAGGGAGAACTGCAAATATCTTCATCCACCCCCACAT  51
                                   |..||.|||||||||||.||||||||||||||||||||||||||||||||.
Sbjct  149  TAATCGCCTGCTTTGATTCACTGAAAGGTCGTTGCTCCAGAGAGAACTGCAAATATCTTCATCCACCCCCACAC  222

Query   52  TTAAAAACGCAGTTGGAGATAAATGGACGCAATAACTTGATTCAGCAGAAGAACATGGCCATGTTGGCCCAGCA  125
            ||||||||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||||||.||||||||||
Sbjct  223  TTAAAAACACAGTTAGAGATAAATGGGCGGAATAACTTGATTCAGCAGAAGAACATGGCCATGCTGGCCCAGCA  296

Query  126  AATGCAACTAGCCAATGCCATGATGCCTGGTGCCCCATTACAACCCGT--------------------------  173
            ||||||..|||||||||||||||||||.||||||||.||.||.|||||                          
Sbjct  297  AATGCAGTTAGCCAATGCCATGATGCCCGGTGCCCCGTTGCAGCCCGTGAACATAATGCAACAATCATTCCAAA  370

Query  174  --------------------------------------------------------------------------  173
                                                                                      
Sbjct  371  AAAGAGGGGGGGATTGCATTTCGAGGTGGGAGGGATCCCCATATTACACCGGCAGTGATACCATTTATCAATAC  444

Query  174  -----------GCCAATGTTTTCAGTTGCACCAAGCTTAGCCACCAATGCATCAGCAGCCGCCTTTAATCCCTA  236
                       |||||||||||||||||||||||||||||||||||.||||||||||   ||||||||.||.||
Sbjct  445  TGTACAGTCGAGCCAATGTTTTCAGTTGCACCAAGCTTAGCCACCAGTGCATCAGCA---GCCTTTAACCCTTA  515

Query  237  TCTGGGACCTGTTTCTCCAAGCCTGGTCCCGGCAGAGATCTTGCCGACTGCACCAATGTTGGTTACAGGGAATC  310
            .|||||.||||||||.|||||||||||.||.||||||||||||||||||||||||||||||||.||.|||||||
Sbjct  516  CCTGGGGCCTGTTTCCCCAAGCCTGGTTCCAGCAGAGATCTTGCCGACTGCACCAATGTTGGTCACGGGGAATC  589

Query  311  CGGGTGTCCCTGTACCTGCAGCTGCTGCAGCTGCTGCACAGAAATTAATGCGAACAGACAGACTTGAGGTATGT  384
            |.||.||.||.||.||.||||||||.|||||||||||||||||.||||||||.|||||||||||.|||||.|||
Sbjct  590  CTGGAGTTCCAGTGCCAGCAGCTGCCGCAGCTGCTGCACAGAAGTTAATGCGGACAGACAGACTGGAGGTGTGT  663

Query  385  CGAGAGTACCAACGTGGCAATTGCAACCGAGGAGAAAATGATTGTCGGTTTGCTCATCCTGCTGACAGCACAAT  458
            |||||||||||.|||||||||||||||.|||||||||||||.||||||||||||||||||||||||||||||||
Sbjct  664  CGAGAGTACCAGCGTGGCAATTGCAACAGAGGAGAAAATGACTGTCGGTTTGCTCATCCTGCTGACAGCACAAT  737

Query  459  GATTGACACCAATGACAACACAGTCACTGTGTGTATGGATTACATCAAAGGGAGATGCTCTCGGGAAAAGTGCA  532
            ||||||.|||||||||||||||||||||||.||.||||||||||||||.|||||||||||||||||||||||||
Sbjct  738  GATTGATACCAATGACAACACAGTCACTGTCTGCATGGATTACATCAAGGGGAGATGCTCTCGGGAAAAGTGCA  811

Query  533  AATACTTTCATCCCCCTGCACATTTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCT  606
            |||||||.|||||.||.|||||..|||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct  812  AATACTTCCATCCTCCCGCACACCTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCA  885

Query  607  GCACAGGCTGCAGCCACCGCAGCTGCCATGACTCAGTCGGCTGTCAAATCACTGAAGCGACCCCTCGAGGCAAC  680
            ||||||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  886  GCACAGGCTGCAGCTACTGCAGCTGCCATGACTCAGTCGGCTGTCAAATCACTGAAGCGACCCCTCGAGGCAAC  959

Query  681  CTTTGACCTGGGAATTCCTCAAGCTGTACTTCCCCCATTACCAAAGAGGCCTGCTCTTGAAAAAACCAACGGTG  754
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct  960  CTTTGACCTGGGAATTCCTCAAGCTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTTGAAAAAACCAACGGTG  1033

Query  755  CCACCGCAGTCTTTAACACTGGTATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAACAGCATACA  828
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 1034  CCACCGCAGTCTTTAACACTGGTATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACA  1107

Query  829  GCATTTCTCCCACCAGGCTCAATATTGTGCATGACACCCGCTACAAGTGTTGTTCCCATGGTGCACGGTGCTAC  902
            |||||||||||||||||||||||||||||||||||||||||||||||||||                       
Sbjct 1108  GCATTTCTCCCACCAGGCTCAATATTGTGCATGACACCCGCTACAAGTGTT-----------------------  1158

Query  903  GCCAGCCACTGTGTCCGCAGCAACAACATCTGCCACAAGTGTTCCCTTCGCTGCAACAGCCACAGCCAACCAGA  976
                                                                                    ||
Sbjct 1159  ------------------------------------------------------------------------GA  1160

Query  977  TACCCATAATATCTGCCGAACATCTGACTAGCCACAAGTATGTTACCCAGATG  1029
            ||||||||||||||||||||||||||||                         
Sbjct 1161  TACCCATAATATCTGCCGAACATCTGAC-------------------------  1188

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