Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15496
Subject:
XM_006501787.3
Aligned Length:
1140
Identities:
876
Gaps:
219

Alignment

Query    1  ATGGGCCGTTGCTCCAGGGAGAACTGCAAATATCTTCATCCACCCCCACATTTAAAAACGCAGTTGGAGATAAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGGACGCAATAACTTGATTCAGCAGAAGAACATGGCCATGTTGGCCCAGCAAATGCAACTAGCCAATGCCATGA  148
                                           |||||||||.||||||||||||||||..|||||||||||||||
Sbjct    1  -------------------------------ATGGCCATGCTGGCCCAGCAAATGCAGTTAGCCAATGCCATGA  43

Query  149  TGCCTGGTGCCCCATTACAACCCGT-------------------------------------------------  173
            ||||.||||||||.||.||.|||||                                                 
Sbjct   44  TGCCCGGTGCCCCGTTGCAGCCCGTGAACATAATGCAACAATCATTCCAAAAAAGAGGGGGGGATTGCATTTCG  117

Query  174  --------------------------------------------------------------GCCAATGTTTTC  185
                                                                          ||||||||||||
Sbjct  118  AGGTGGGAGGGATCCCCATATTACACCGGCAGTGATACCATTTATCAATACTGTACAGTCGAGCCAATGTTTTC  191

Query  186  AGTTGCACCAAGCTTAGCCACCAATGCATCAGCAGCCGCCTTTAATCCCTATCTGGGACCTGTTTCTCCAAGCC  259
            |||||||||||||||||||||||.||||||||||   ||||||||.||.||.|||||.||||||||.|||||||
Sbjct  192  AGTTGCACCAAGCTTAGCCACCAGTGCATCAGCA---GCCTTTAACCCTTACCTGGGGCCTGTTTCCCCAAGCC  262

Query  260  TGGTCCCGGCAGAGATCTTGCCGACTGCACCAATGTTGGTTACAGGGAATCCGGGTGTCCCTGTACCTGCAGCT  333
            ||||.||.||||||||||||||||||||||||||||||||.||.||||||||.||.||.||.||.||.||||||
Sbjct  263  TGGTTCCAGCAGAGATCTTGCCGACTGCACCAATGTTGGTCACGGGGAATCCTGGAGTTCCAGTGCCAGCAGCT  336

Query  334  GCTGCAGCTGCTGCACAGAAATTAATGCGAACAGACAGACTTGAGGTATGTCGAGAGTACCAACGTGGCAATTG  407
            ||.|||||||||||||||||.||||||||.|||||||||||.|||||.||||||||||||||.|||||||||||
Sbjct  337  GCCGCAGCTGCTGCACAGAAGTTAATGCGGACAGACAGACTGGAGGTGTGTCGAGAGTACCAGCGTGGCAATTG  410

Query  408  CAACCGAGGAGAAAATGATTGTCGGTTTGCTCATCCTGCTGACAGCACAATGATTGACACCAATGACAACACAG  481
            ||||.|||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  411  CAACAGAGGAGAAAATGACTGTCGGTTTGCTCATCCTGCTGACAGCACAATGATTGATACCAATGACAACACAG  484

Query  482  TCACTGTGTGTATGGATTACATCAAAGGGAGATGCTCTCGGGAAAAGTGCAAATACTTTCATCCCCCTGCACAT  555
            |||||||.||.||||||||||||||.||||||||||||||||||||||||||||||||.|||||.||.|||||.
Sbjct  485  TCACTGTCTGCATGGATTACATCAAGGGGAGATGCTCTCGGGAAAAGTGCAAATACTTCCATCCTCCCGCACAC  558

Query  556  TTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCTGCACAGGCTGCAGCCACCGCAGC  629
            .|||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||.|||||
Sbjct  559  CTGCAAGCCAAGATCAAGGCTGCCCAATACCAGGTCAACCAGGCTGCAGCAGCACAGGCTGCAGCTACTGCAGC  632

Query  630  TGCCATGACTCAGTCGGCTGTCAAATCACTGAAGCGACCCCTCGAGGCAACCTTTGACCTGGGAATTCCTCAAG  703
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  633  TGCCATGACTCAGTCGGCTGTCAAATCACTGAAGCGACCCCTCGAGGCAACCTTTGACCTGGGAATTCCTCAAG  706

Query  704  CTGTACTTCCCCCATTACCAAAGAGGCCTGCTCTTGAAAAAACCAACGGTGCCACCGCAGTCTTTAACACTGGT  777
            ||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  707  CTGTACTTCCCCCATTGCCAAAGAGGCCTGCTCTTGAAAAAACCAACGGTGCCACCGCAGTCTTTAACACTGGT  780

Query  778  ATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAACAGCATACAGCATTTCTCCCACCAGGCTCAAT  851
            |||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct  781  ATTTTCCAATACCAACAGGCTCTAGCCAACATGCAGTTACAGCAGCATACAGCATTTCTCCCACCAGGCTCAAT  854

Query  852  ATTGTGCATGACACCCGCTACAAGTGTTGTTCCCATGGTGCACGGTGCTACGCCAGCCACTGTGTCCGCAGCAA  925
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  855  ATTGTGCATGACACCCGCTACAAGTGTTGTTCCCATGGTGCACGGTGCTACGCCAGCCACTGTGTCCGCAGCAA  928

Query  926  CAACATCTGCCACAAGTGTTCCCTTCGCTGCAACAGCCACAGCCAACCAGATACCCATAATATCTGCCGAACAT  999
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  929  CAACATCTGCCACAAGTGTTCCCTTCGCTGCAACAGCCACAGCCAACCAGATACCCATAATATCTGCCGAACAT  1002

Query 1000  CTGACTAGCCACAAGTATGTTACCCAGATG  1029
            ||||||||||||||||||||||||||||||
Sbjct 1003  CTGACTAGCCACAAGTATGTTACCCAGATG  1032

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