Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15682
Subject:
XM_005245681.2
Aligned Length:
3072
Identities:
164
Gaps:
2886

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAGGTCAGAGCTTCATTACAGAAGATAGTTTCTAATGGTGATGAACAATTGGAAAAAGCCATGGAAGAGAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTTGAGAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATTGTCAAAGTTCCAGTGAGATTTCAGACCATT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGTTTGGAGATATTCCAGCCAGCCAAACAAATAAGCCATCTCTTCAGTTAATTTTGGATCCGTCTAACACAGAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATTTCTACACCCAGACCATCTTCTCCAGGTGGACTACCTGAAGAAGATAGTGTTTTATTTAATAAACTGACCTA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTTAGGATGTATGAAGGTTTCTTCCCCACGTAATGAAGTAGAGGCTTTACGGGCAATGGCAACCATGAAATCTT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCAGTCAATACCCCTTTCCTGTTACCCTGTATGTACCAAATGTTCCAGAAGGTTCTGTGAGAATTATAGACCAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCCAGCAATGTGGAGATAGCATCTTTTCCAATCTATAAGGTGTTATTCTGTGCACGTGGACATGACGGAACAAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGAGAGCAATTGCTTTGCATTTACAGAGAGTTCCCATGGTTCGGAAGAATTTCAGATACATGTTTTCTCCTGTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAATTAAAGAGGCAGTAAGCAGAATTTTGTACAGTTTCTGTACAGCATTCAAACGTTCTTCCAGACAAGTGTCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GATGTTAAAGACTCAGTTATTCCTACCCCCGACAGTGATGTGTTTACCTTCAGTGTCTCCTTGGAGGTAAAAGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGACGATGGAAAAGGAAACTTTAGCCCTGTGCCTAAGGATAGAGATAAATTTTATTTCAAATTAAAGCAAGGAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TAGAGAAGAAGGTTGTGATTACAGTGCAGCAACTTTCTAACAAAGAATTAGCTATTGAAAGATGTTTTGGAATG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTATTAAGCCCAGGTCGAAACGTGAAGAACAGTGACATGCATTTACTGGATATGGAATCCATGGGAAAGAGCTA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TGATGGGAGAGCTTATGTCATCACTGGCATGTGGAACCCCAATGCACCAGTATTTCTGGCACTTAACGAGGAAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCCCAAAAGATAAGCAAGTATACATGACTGTGGCAGTGGATATGGTAGTCACAGAGGTGGTGGAGCCTGTTCGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTTCTCCTGGAGACAGTAGTCCGTGTGTACCCTGCAAATGAGCGATTTTGGTATTTCAGCAGAAAGACTTTCAC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGAGACTTTCTTCATGAGATTGAAACAGTCTGAGGGAAAAGGCCATACCAATGCTGGAGATGCAATATATGAGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGGTGAGTCTACAGCGAGAGTCTGACAAGGAGGAACCAGTCACTCCTACTAGTGGAGGGGGTCCAATGTCACCC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CAGGATGATGAAGCAGAAGAGGAGAGTGATAATGAACTCTCAAGTGGAACAGGTGATGTGTCTAAGGATTGTCC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGAGAAGATCCTGTATTCTTGGGGAGAGTTGCTAGGAAAATGGCACAGTAACCTTGGTGCACGACCGAAAGGGC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGTCTACTCTGGTGAAGAGTGGTGTCCCTGAAGCATTGAGGGCAGAGGTATGGCAGTTATTGGCAGGCTGCCAT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GACAACCAGGCAATGCTGGATAGATACCGAATTCTTATCACAAAGGACTCAGCCCAGGAGAGTGTTATTACTCG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AGATATTCATCGTACATTTCCCGCACATGATTACTTTAAAGATACTGGAGGAGATGGTCAAGAATCGCTCTATA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGATCTGCAAGGCCTACTCTGTGTATGATGAAGACATTGGGTACTGTCAAGGGCAGTCTTTTCTTGCTGCTGTA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TTACTGCTGCATATGCCAGAGGAACAAGCATTCTGTGTTTTGGTGAAAATCATGTACGACTATGGTTTGAGAGA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCTCTACAGAAACAACTTCGAAGATCTTCATTGCAAATTCTACCAGTTGGAGAGACTAATGCAGGAACAGCTAC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CGGACCTGCATAGCCATTTTTCTGATCTGAACCTGGAAGCTCATATGTATGCATCCCAGTGGTTTCTCACTCTT  1998

Query    1  -------------------------------------------------------ATGA----TGGAAGA-AAT  14
                                                                   .|||    |.|||.| |||
Sbjct 1999  TTTACTGCCAAGTTCCCACTCTGCATGGTGTTCCACATCATTGACTTACTGCTTTGTGAGGGTTTGAACATAAT  2072

Query   15  C-TCCATTATGGTAGCCT-----------ATGAC----------------------GCCCATGTT---------  45
            | |.|||    |||||.|           |.|||                      ||..||.||         
Sbjct 2073  CTTTCAT----GTAGCTTTGGCTCTCCTAAAGACCTCAAAGGAAGACCTTCTGCAGGCTGATTTTGAAGGTGCT  2142

Query   46  ----------------TTCAGC-------CAGCTGCACG----------ATG-AAGACTTCCTCACTAGTCTGG  85
                            ||||||       .||.|.||.|          ||| ||||          ||.|||.
Sbjct 2143  TTAAAGTTCTTTAGAGTTCAGCTTCCAAAGAGATACAGGGCAGAGGAAAATGCAAGA----------AGACTGA  2206

Query   86  TGGCCATCAGCAAGC---CCAGGTCTATGGTACCAACCAAGAAGCTGAAGAAATATGAGAAAGAATATCAGACA  156
            |||     ||||.||   |.|..| ||..|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2207  TGG-----AGCAGGCTTGCAATAT-TAAAGTACCAACCAAGAAGCTGAAGAAATATGAGAAAGAATATCAGACA  2274

Query  157  ATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATGGATAGATACAAGTTTGTATATTTG--------------  216
            ||||||||||||||||||||||||||||||||||||||||||||||||          .|              
Sbjct 2275  ATGCGAGAGAGTCAGCTGCAACAGGAAGACCCAATGGATAGATACAAG----------AGGGAGAACCGAAGAT  2338

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2339  TACAGGAGGCCAGCATGAGGTTGGAACAAGAGAATGATGACCTTGCCCATGAACTAGTAACAAGCAAAATTGCT  2412

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2413  CTACGGAATGACTTGGATCAGGCAGAAGACAAGGCAGATGTGTTGAATAAAGAGCTCCTTTTGACCAAACAGAG  2486

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2487  GCTGGTGGAGACTGAAGAGGAGAAGAGGAAGCAAGAGGAAGAGACTGCCCAGCTAAAAGAAGTCTTCAGGAAAC  2560

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2561  AGCTAGAGAAGGCAGAATATGAAATAAAGAAGACTACAGCTATCATTGCTGAGTATAAACAGATCTGTTCGCAG  2634

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2635  TTGAGTACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAGGAGCTGGAAGTGGTAAAGGGTAAGATGATGGC  2708

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2709  ATGCAAACACTGCAGTGACATTTTCAGCAAGGAGGGTGCTTTGAAACTAGCAGCCACAGGCAGAGAGGACCAGG  2782

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2783  GAATTGAAACAGATGATGAGAAGGACTCACTTAAGAAGCAGCTGAGAGAGATGGAACTGGAACTGGCACAAACC  2856

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2857  AAACTGCAGTTGGTGGAGGCCAAGTGTAAAATTCAGGAACTTGAACATCAGAGAGGAGCCCTTATGAATGAAAT  2930

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2931  CCAAGCTGCGAAAAACTCTTGGTTTAGCAAAACCCTGAACTCTATCAAAACGGCCACGGGCACCCAGCCATTGC  3004

Query  217  --------------------------------------  216
                                                  
Sbjct 3005  AGCCAGCACCGGTCACCCAGCCACCCAAGGAGAGCACA  3042

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