Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15682
Subject:
XR_922004.1
Aligned Length:
3154
Identities:
216
Gaps:
2938

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TCTTCCTGCCAGGCGGCCCTTCTCCCCTCCCCTCTCAGTTCCCTCCGCCCTCCTCGGGCTCCAGCGGTGGCGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCGAACGGGACCGGCCCGGCTTCAGAGCGCGAGGTGGAGGGTGGAACGCGGGCGCCTGAAGGAGTTGTTGTCTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGCAGCGCCCGCGGAGACGTGAAGAGGTGGTTGTGGGAAGAGAAGTTTGCAGAACTGAAATGGAGGTCAGAGCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCATTACAGAAGGTTAGTGGATCATCTGATTCTGTGGCTACAATGAACAGTGAAGAATTTGTTTTGGTTCCTCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTATGCAGATGATAATTCTACAAAACATGAAGAAAAACCTCAACTGAAGATAGTTTCTAATGGTGATGAACAAT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGAAAAAGCCATGGAAGAGATTTTGAGAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATTGTCAAAGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCCAGTGAGATTTCAGACCATTCGTTTGGAGATATTCCAGCCAGCCAAACAAATAAGCCATCTCTTCAGTTAAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTTGGATCCGTCTAACACAGAAATTTCTACACCCAGACCATCTTCTCCAGGTGGACTACCTGAAGAAGATAGTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTTTATTTAATAAACTGACCTACTTAGGATGTATGAAGGTTTCTTCCCCACGTAATGAAGTAGAGGCTTTACGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCAATGGCAACCATGAAATCTTCCAGTCAATACCCCTTTCCTGTTACCCTGTATGTACCAAATGTTCCAGAAGG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTCTGTGAGAATTATAGACCAATCCAGCAATGTGGAGATAGCATCTTTTCCAATCTATAAGGTGTTATTCTGTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CACGTGGACATGACGGAACAACAGAGAGCAATTGCTTTGCATTTACAGAGAGTTCCCATGGTTCGGAAGAATTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CAGATACATGTTTTCTCCTGTGAAATTAAAGAGGCAGTAAGCAGAATTTTGTACAGTTTCTGTACAGCATTCAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ACGTTCTTCCAGACAAGTGTCTGATGTTAAAGACTCAGTTATTCCTACCCCCGACAGTGATGTGTTTACCTTCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTGTCTCCTTGGAGGTAAAAGAAGACGATGGAAAAGGAAACTTTAGCCCTGTGCCTAAGGATAGAGATAAATTT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TATTTCAAATTAAAGCAAGGAATAGAGAAGAAGGTTGTGATTACAGTGCAGCAACTTTCTAACAAAGAATTAGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TATTGAAAGATGTTTTGGAATGTTATTAAGCCCAGGTCGAAACGTGAAGAACAGTGACATGCATTTACTGGATA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGGAATCCATGGGAAAGAGCTATGATGGGAGAGCTTATGTCATCACTGGCATGTGGAACCCCAATGCACCAGTA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTTCTGGCACTTAACGAGGAAACCCCAAAAGATAAGCAAGTATACATGACTGTGGCAGTGGATATGGTAGTCAC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGAGGTGGTGGAGCCTGTTCGCTTTCTCCTGGAGACAGTAGTCCGTGTGTACCCTGCAAATGAGCGATTTTGGT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ATTTCAGCAGAAAGACTTTCACAGAGACTTTCTTCATGAGATTGAAACAGTCTGAGGGAAAAGGCCATACCAAT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GCTGGAGATGCAATATATGAGGTGGTGAGTCTACAGCGAGAGTCTGACAAGGAGGAACCAGTCACTCCTACTAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGGAGGGGGTCCAATGTCACCCCAGGATGATGAAGCAGAAGAGGAGAGTGATAATGAACTCTCAAGTGGAACAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GTGATGTGTCTAAGGATTGTCCTGAGAAGATCCTGTATTCTTGGGGAGAGTTGCTAGGAAAATGGCACAGTAAC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CTTGGTGCACGACCGAAAGGGCTGTCTACTCTGGTGAAGAGTGGTGTCCCTGAAGCATTGAGGGCAGAGGTATG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GCAGTTATTGGCAGGCTGCCATGACAACCAGGCAATGCTGGATAGATACCGAATTCTTATCACAAAGGACTCAG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CCCAGGAGAGTGTTATTACTCGAGATATTCATCGTACATTTCCCGCACATGATTACTTTAAAGATACTGGAGGA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GATGGTCAAGAATCGCTCTATAAGATCTGCAAGGCCTACTCTGTGTATGATGAAGACATTGGGTACTGTCAAGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GCAGTCTTTTCTTGCTGCTGTATTACTGCTGCATATGCCAGAGGAACAAGCATTCTGTGTTTTGGTGAAAATCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TGTACGACTATGGTTTGAGAGACCTCTACAGAAACAACTTCGAAGATCTTCATTGCAAATTCTACCAGTTGGAG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AGACTAATGCAGGAACAGCTACCGGACCTGCATAGCCATTTTTCTGATCTGAACCTGGAAGCTCATATGTATGC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  ATCCCAGTGGTTTCTCACTCTTTTTACTGCCAAGTTCCCACTCTGCATGGTGTTCCACATCATTGACTTACTGC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TTTGTGAGGGTTTGAACATAATCTTTCATGTAGCTTTGGCTCTCCTAAAGACCTCAAAGGAAGACCTTCTGCAG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GCTGATTTTGAAGGTGCTTTAAAGTTCTTTAGAGTTCAGCTTCCAAAGAGATACAGGGCAGAGGAAAATGCAAG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AAGACTGATGGAGCAGGCTTGCAATATTAAAGTGGGTGTGTACACTGGCACTGAGCTGCAGTAGGATTTTTCCT  2590

Query    1  ------------------------------------------------------------ATGATGGAAGAAAT  14
                                                                        ||||||||||||||
Sbjct 2591  TGGATAGTCTGGTCTGGAGCTGGGACAGCAGCTGCTGCTGTGGAAAGGCCAGCTGGCAAGATGATGGAAGAAAT  2664

Query   15  CTCCATTATGGTAGCCTATGACGCCCATGTTTTCAGCCAGCTGCACGATGAAGACTTCCTCACTAGTCTGGTGG  88
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665  CTCCATTATGGTAGCCTATGACGCCCATGTTTTCAGCCAGCTGCACGATGAAGACTTCCTCACTAGTCTGGTGG  2738

Query   89  CCATCAGCAAGCCCAGGTCTATGGTACCAACCAAGAAGCTGAAGAAATATGAGAAAGAATATCAGACAATGCGA  162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739  CCATCAGCAAGCCCAGGTCTATGGTACCAACCAAGAAGCTGAAGAAATATGAGAAAGAATATCAGACAATGCGA  2812

Query  163  GAGAGTCAGCTGCAACAGGAAGACCCAATGGATAGATACAAGTTTGTATATTTG--------------------  216
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||                    
Sbjct 2813  GAGAGTCAGCTGCAACAGGAAGACCCAATGGATAGATACAAGTTTGTATATTTGTAGGTAACTCCAGCTGTTGC  2886

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2887  ATTTATACTGGGAATCTTCATAAGAAGCTGAGAGAAAGAGAGGGGAAAAAGAAAGTGGCTTTCTACTTTCAAAA  2960

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 2961  ATGAAACAAAAAGGAAAAATGGCAAAGTACTGTTTTAGCTGTGCATGTCATATCCACAAAGACTTTTAGCAGGT  3034

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct 3035  GAACTGTTCCAAGACTGACACAAGGATGTTTCAAACTTGCCTCTGTCTGTAGAAAATGTTAAAAATACCAACTC  3108

Query  217  ----------------------------------------------  216
                                                          
Sbjct 3109  ACTTGGAAGGAAAAATAAAAATCACAAAGGTATATTGAGCACAGTA  3154

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