Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15888
Subject:
XM_017006731.1
Aligned Length:
5193
Identities:
918
Gaps:
4275

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGACTGGCTTTTCGAGGCGCTGGTTGTGCTCTGAAGAAGTTGGATTCCATGGGTTCCAAGAGAAGAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACACCAGGCCCAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTCTATAATACC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATCCGAGACTATAAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCGAAGAAATCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTAAAAATGGAAGAGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTTTTTAACAATGCAAAGTCCTATTATAAGCCAGAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGTTCAGAAAGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGAAAAGTACTTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTTCTCCACATTACCAGTCTTCTCCAGCTTACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAGAAACTGCCTTCTAAAGTGCAATATCCAGATTA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTATGCAATAATTAAGGAGCCTATAGATCTCAAGACCATTGCCCAGAGGATACAGAATGGAAGCTACAAAAGTA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTCATGCAATGGCCAAAGATATAGATCTCCTCGCAAAAAATGCCAAAACTTATAATGAGCCTGGCTCTCAAGTA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTCAAGGATGCAAATTCAATTAAAAAAATATTTTATATGAAAAAGGCTGAAATTGAACATCATGAAATGGCTAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTCAAGTCTTCGAATGAGGACTCCATCCAACTTGGCTGCAGCCAGACTGACAGGTCCTTCACACAGTAAAGGCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCCTTGGTGAAGAGAGAAATCCCACTAGCAAGTATTACCGTAATAAAAGAGCAGTACAAGGAGGTCGTTTATCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GCAATTACAATGGCACTTCAATATGGCTCAGAAAGTGAAGAAGATGCTGCTTTAGCTGCTGCACGCTATGAAGA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGGAGAGTCAGAAGCAGAAAGCATCACTTCCTTTATGGATGTTTCAAATCCTTTTTATCAGCTTTATGACACAG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TTAGGAGTTGTCGGAATAACCAAGGGCAGCTAATAGCTGAACCTTTTTACCATTTGCCTTCAAAGAAAAAATAC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CCTGATTATTACCAGCAAATTAAAATGCCCATATCACTACAACAGATCCGAACAAAACTGAAGAATCAAGAATA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGAAACTTTAGATCATTTGGAGTGTGATCTGAATTTAATGTTTGAAAATGCCAAACGCTATAATGTGCCCAATT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CAGCCATCTACAAGCGAGTTCTAAAATTGCAGCAAGTTATGCAGGCAAAGAAGAAAGAGCTTGCCAGGAGAGAC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GATATCGAGGACGGAGACAGCATGATCTCTTCAGCCACCTCTGATACTGGTAGTGCCAAAAGAAAAAGGAACAC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TCATGACAGTGAGATGTTGGGTCTCAGGAGGCTATCCAGTAAAAAGAACATAAGAAAGCAGCGAATGAAAATCT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TATTCAATGTTGTTCTTGAAGCTCGAGAGCCAGGTTCAGGCAGAAGACTTTGTGACCTATTTATGGTTAAACCA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TCCAAAAAGGACTATCCTGATTATTATAAAATCATCTTGGAGCCAATGGACTTGAAAATAATTGAGCATAACAT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCGCAATGACAAATATGCTGGTGAAGAGGGAATGATAGAAGACATGAAGCTGATGTTCCGGAATGCCAGGCACT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ATAATGAGGAGGGCTCCCAGGTTTATAATGATGCACATATCCTGGAGAAGTTACTCAAGGAGAAAAGGAAAGAG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CTGGGCCCACTGCCTGATGATGATGACATGGCTTCTCCCAAACTCAAGCTGAGTAGGAAGAGTGGCATTTCTCC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TAAAAAATCAAAATACATGACTCCAATGCAGCAGAAACTAAATGAGGTCTATGAAGCTGTAAAGAACTATACTG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ATAAGAGGGGTCGCCGCCTCAGTGCCATATTTCTGAGGCTTCCCTCTAGATCTGAGTTGCCTGACTACTATCTG  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ACTATTAAAAAGCCCATGGACATGGAAAAAATTCGAAGTCACATGATGGCCAACAAGTACCAAGATATTGACTC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TATGGTTGAGGACTTTGTCATGATGTTTAATAATGCCTGTACATACAATGAGCCGGAGTCTTTGATCTACAAAG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  ATGCTCTTGTTCTACACAAAGTCCTGCTTGAAACACGCAGAGACCTGGAGGGAGATGAGGACTCTCATGTCCCA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  AATGTGACTTTGCTGATTCAAGAGCTTATCCACAATCTTTTTGTGTCAGTCATGAGTCATCAGGATGATGAGGG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AAGATGCTACAGCGATTCTTTAGCAGAAATTCCTGCTGTGGATCCCAACTTTCCTAACAAACCACCCCTTACAT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TTGACATAATTAGGAAGAATGTTGAAAATAATCGCTACCGTCGGCTTGATTTATTTCAAGAGCATATGTTTGAA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GTATTGGAACGAGCAAGAAGGATGAATCGGACAGATTCAGAAATATATGAAGATGCAGTAGAACTTCAGCAGTT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TTTTATTAAAATTCGTGATGAACTCTGCAAAAATGGAGAGATTCTTCTTTCACCGGCACTCAGCTATACCACAA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AACATTTGCATAATGATGTGGAGAAAGAGAGAAAGGAAAAATTGCCAAAAGAAATAGAGGAAGATAAACTAAAA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  CGAGAAGAAGAAAAAAGAGAAGCTGAAAAGAGTGAAGATTCCTCTGGTGCTGCAGGCCTCTCAGGCTTACATCG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CACATACAGCCAGGACTGTAGCTTTAAAAACAGCATGTACCATGTTGGAGATTACGTCTATGTGGAACCTGCAG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  AGGCCAACCTACAACCACATATCGTCTGTATTGAAAGACTGTGGGAGGATTCAGCTGGTGAAAAATGGTTGTAT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GGCTGTTGGTTTTACCGACCAAATGAAACATTCCACCTGGCTACACGAAAATTTCTAGAAAAAGAAGTTTTTAA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GAGTGACTATTACAACAAAGTTCCAGTTAGTAAAATTCTAGGCAAGTGTGTGGTCATGTTTGTCAAGGAATACT  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TTAAGTTATGCCCAGAAAACTTCCGAGATGAGGATGTTTTTGTCTGTGAATCACGGTATTCTGCCAAAACCAAA  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  TCTTTTAAGAAAATTAAACTGTGGACCATGCCCATCAGCTCAGTCAGGTTTGTCCCTCGGGATGTGCCTCTGCC  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TGTGGTTCGCGTGGCCTCTGTATTTGCAAATGCAGATAAAGGTGATGATGAGAAGAATACAGACAACTCAGAGG  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  ACAGTCGAGCTGAAGACAATTTTAACTTGGAAAAGGAAAAAGAAGATGTCCCTGTGGAAATGTCCAATGGTGAA  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CCAGGTTGCCACTACTTTGAGCAGCTCCATTACAATGACATGTGGCTGAAGGTTGGCGACTGTGTCTTCATCAA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GTCCCATGGCCTGGTGCGTCCTCGTGTGGGCAGAATTGAAAAAGTATGGGTTCGAGATGGAGCTGCATATTTTT  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  ATGGCCCCATCTTCATTCACCCAGAAGAAACAGAGCATGAGCCCACAAAAATGTTCTACAAAAAAGAAGTATTT  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  CTGAGTAATCTGGAAGAAACCTGCCCCATGACATGTATTCTCGGAAAGTGTGCTGTGTTGTCATTCAAGGACTT  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  CCTCTCCTGCAGGCCAACTGAAATACCAGAAAATGACATTCTGCTTTGTGAGAGCCGCTACAATGAGAGCGACA  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  AGCAGATGAAGAAATTCAAAGGATTGAAGAGGTTTTCACTCTCTGCTAAAGTGGTAGATGATGAAATTTACTAC  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  TTCAGAAAACCAATTGTTCCTCAGAAGGAGCCATCACCTTTGCTGGAAAAGAAGATCCAGTTGCTAGAAGCTAA  4070

Query    1  ----------------------------------------ATGGGAGAAGAAGATAGTGAGGTCATTGAACCTC  34
                                                    ||||||||||||||||||||||||||||||||||
Sbjct 4071  ATTTGCCGAGTTAGAAGGTGGAGATGATGATATTGAAGAGATGGGAGAAGAAGATAGTGAGGTCATTGAACCTC  4144

Query   35  CTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCCACAGTCTACC  108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145  CTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCCACAGTCTACC  4218

Query  109  CCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTACATCCTGTT  182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4219  CCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTACATCCTGTT  4292

Query  183  CAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGG  256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4293  CAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCGCCTGGTGG  4366

Query  257  GGACAGAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGA----------------------------  302
            ||||||||||||||||||||||||||||||||||||||||||||||                            
Sbjct 4367  GGACAGAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGAAGAGCGGGCAGCTAAAGTTGCTGAGCAG  4440

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4441  CAGGAGAGAGAGCGAGCAGCACAGCAACAGCAGCCGAGTGCTTCTCCCCGAGCAGGCACCCCTGTGGGGGCTCT  4514

Query  303  ---------------------------------------------------------------AGGCATGATGG  313
                                                                           |||||||||||
Sbjct 4515  CATGGGGGTGGTGCCACCACCAACACCAATGGGGATGCTCAATCAGCAGTTGACACCTGTTGCAGGCATGATGG  4588

Query  314  GTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCA  387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589  GTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCATGCAGCCA  4662

Query  388  CTTCACCCTGGGGGGCCTCCACCCCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGG  461
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4663  CTTCACCCTGGGGGGCCTCCACCCCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCACCACCGGG  4736

Query  462  TGTGATGAACCAAGGAGTGGCCCCTATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGG  535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4737  TGTGATGAACCAAGGAGTGGCCCCTATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACAACAGGTGG  4810

Query  536  GAGTTTTGGGGCCTCCAGGGCAGCAGGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATA  609
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4811  GAGTTTTGGGGCCTCCAGGGCAGCAGGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCCCTGTCATA  4884

Query  610  CAGCAGCCAACAACACCCATGTTTGTAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCT  683
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4885  CAGCAGCCAACAACACCCATGTTTGTAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAGGCCTACCT  4958

Query  684  GAAATACATTGAAGGACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGAC  757
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4959  GAAATACATTGAAGGACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGCTCGAAGAC  5032

Query  758  GCGACGTCCATTTGTCGAAAGAACAGGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACC  831
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5033  GCGACGTCCATTTGTCGAAAGAACAGGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGGCCCACACC  5106

Query  832  ACCATGGCAGATGCCCTCTGGCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAA  905
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5107  ACCATGGCAGATGCCCTCTGGCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCATACAA  5180

Query  906  CCTAGAAAATGTT  918
            |||||||||||||
Sbjct 5181  CCTAGAAAATGTT  5193

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