Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15888
Subject:
XM_017006743.2
Aligned Length:
5127
Identities:
918
Gaps:
4209

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGAGACTGGCTTTTCGAGGCGCTGGTTGTGCTCTGGTAAAGCTGAAGAAGTTGGATTCCATGGGTTCCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGAAGAAGAGCTACCTCCCCTTCCAGCAGTGTCAGCGGGGACTTTGATGATGGGCACCATTCTGTGTCAACAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGGCCCAAGCAGGAAAAGGAGGAGACTTTCCAATCTTCCAACTGTAGATCCTATTGCCGTGTGCCATGAACTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TATAATACCATCCGAGACTATAAGGATGAACAGGGCAGACTTCTCTGTGAGCTCTTCATTAGGGCACCAAAGCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACAGAAACTAAAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGAAGAGTATGATGATGTTAATTTGCTGACTGCTGACTTCCAGCTTCTTTTTAACAATGCAAAGTCCTATTAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAGCCAGATTCTCCTGAATATAAAGCCGCTTGCAAACTCTGGGATTTGTACCTTCGAACAAGAAATGAGTTTGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCAGAAAGGAGAAGCAGATGACGAAGATGATGATGAAGATGGGCAAGACAATCAGGGCACAGTGACTGAAGGAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAGTACTTTTTTCTCCACATTACCAGTCTTCTCCAGCTTACTTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ATAGTTGTAGCTACAAATCCATCAGGACGTCTCATTAGCGAACTTTTTCAGAAACTGCCTTCTAAAGTGCAATA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCCAGATTATTATGCAATAATTAAGGAGCCTATAGATCTCAAGACCATTGCCCAGAGGATACAGAATGGAAGCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACAAAAGTATTCATGCAATGGCCAAAGATATAGATCTCCTCGCAAAAAATGCCAAAACTTATAATGAGCCTGGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCTCAAGTATTCAAGGATGCAAATTCAATTAAAAAAATATTTTATATGAAAAAGGCTGAAATTGAACATCATGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AATGGCTAAGTCAAGTCTTCGAATGAGGACTCCATCCAACTTGGCTGCAGCCAGACTGACAGGTCCTTCACACA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTAAAGGCAGCCTTGGTGAAGAGAGAAATCCCACTAGCAAGTATTACCGTAATAAAAGAGCAGTACAAGGAGGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CGTTTATCAGCAATTACAATGGCACTTCAATATGGCTCAGAAAGTGAAGAAGATGCTGCTTTAGCTGCTGCACG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTATGAAGAGGGAGAGTCAGAAGCAGAAAGCATCACTTCCTTTATGGATGTTTCAAATCCTTTTTATCAGCTTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ATGACACAGTTAGGAGTTGTCGGAATAACCAAGGGCAGCTAATAGCTGAACCTTTTTACCATTTGCCTTCAAAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AAAAAATACCCTGATTATTACCAGCAAATTAAAATGCCCATATCACTACAACAGATCCGAACAAAACTGAAGAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCAAGAATATGAAACTTTAGATCATTTGGAGTGTGATCTGAATTTAATGTTTGAAAATGCCAAACGCTATAATG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGCCCAATTCAGCCATCTACAAGCGAGTTCTAAAATTGCAGCAAGTTATGCAGGCAAAGAAGAAAGAGCTTGCC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGGAGAGACGATATCGAGGACGGAGACAGCATGATCTCTTCAGCCACCTCTGATACTGGTAGTGCCAAAAGAAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AAGGAACACTCATGACAGTGAGATGTTGGGTCTCAGGAGGCTATCCAGTAAAAAGAACATAAGAAAGCAGCGAA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGAAAATCTTATTCAATGTTGTTCTTGAAGCTCGAGAGCCAGGTTCAGGCAGAAGACTTTGTGACCTATTTATG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GTTAAACCATCCAAAAAGGACTATCCTGATTATTATAAAATCATCTTGGAGCCAATGGACTTGAAAATAATTGA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GCATAACATCCGCAATGACAAATATGCTGGTGAAGAGGGAATGATAGAAGACATGAAGCTGATGTTCCGGAATG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CCAGGCACTATAATGAGGAGGGCTCCCAGGTTTATAATGATGCACATATCCTGGAGAAGTTACTCAAGGAGAAA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  AGGAAAGAGCTGGGCCCACTGCCTGATGATGATGACATGGCTTCTCCCAAACTCAAGCTGAGTAGGAAGAGTGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CATTTCTCCTAAAAAATCAAAATACATGACTCCAATGCAGCAGAAACTAAATGAGGTCTATGAAGCTGTAAAGA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ACTATACTGATAAGAGGGGTCGCCGCCTCAGTGCCATATTTCTGAGGCTTCCCTCTAGATCTGAGTTGCCTGAC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TACTATCTGACTATTAAAAAGCCCATGGACATGGAAAAAATTCGAAGTCACATGATGGCCAACAAGTACCAAGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TATTGACTCTATGGTTGAGGACTTTGTCATGATGTTTAATAATGCCTGTACATACAATGAGCCGGAGTCTTTGA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TCTACAAAGATGCTCTTGTTCTACACAAAGTCCTGCTTGAAACACGCAGAGACCTGGAGGGAGATGAGGACTCT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CATGTCCCAAATGTGACTTTGCTGATTCAAGAGCTTATCCACAATCTTTTTGTGTCAGTCATGAGTCATCAGGA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TGATGAGGGAAGATGCTACAGCGATTCTTTAGCAGAAATTCCTGCTGTGGATCCCAACTTTCCTAACAAACCAC  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CCCTTACATTTGACATAATTAGGAAGAATGTTGAAAATAATCGCTACCGTCGGCTTGATTTATTTCAAGAGCAT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  ATGTTTGAAGTATTGGAACGAGCAAGAAGGATGAATCGGACAGATTCAGAAATATATGAAGATGCAGTAGAACT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TCAGCAGTTTTTTATTAAAATTCGTGATGAACTCTGCAAAAATGGAGAGATTCTTCTTTCACCGGCACTCAGCT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ATACCACAAAACATTTGCATAATGATGTGGAGAAAGAGAGAAAGGAAAAATTGCCAAAAGAAATAGAGGAAGAT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AAACTAAAACGAGAAGAAGAAAAAAGAGAAGCTGAAAAGAGTGAAGATTCCTCTGGTGCTGCAGGCCTCTCAGG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CTTACATCGCACATACAGCCAGGACTGTAGCTTTAAAAACAGCATGTACCATGTTGGAGATTACGTCTATGTGG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  AACCTGCAGAGGCCAACCTACAACCACATATCGTCTGTATTGAAAGACTGTGGGAGGATTCAGCTGAAAAAGAA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GTTTTTAAGAGTGACTATTACAACAAAGTTCCAGTTAGTAAAATTCTAGGCAAGTGTGTGGTCATGTTTGTCAA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GGAATACTTTAAGTTATGCCCAGAAAACTTCCGAGATGAGGATGTTTTTGTCTGTGAATCACGGTATTCTGCCA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  AAACCAAATCTTTTAAGAAAATTAAACTGTGGACCATGCCCATCAGCTCAGTCAGGTTTGTCCCTCGGGATGTG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CCTCTGCCTGTGGTTCGCGTGGCCTCTGTATTTGCAAATGCAGATAAAGGTGATGATGAGAAGAATACAGACAA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CTCAGAGGACAGTCGAGCTGAAGACAATTTTAACTTGGAAAAGGAAAAAGAAGATGTCCCTGTGGAAATGTCCA  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  ATGGTGAACCAGGTTGCCACTACTTTGAGCAGCTCCATTACAATGACATGTGGCTGAAGGTTGGCGACTGTGTC  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  TTCATCAAGTCCCATGGCCTGGTGCGTCCTCGTGTGGGCAGAATTGAAAAAGTATGGGTTCGAGATGGAGCTGC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  ATATTTTTATGGCCCCATCTTCATTCACCCAGAAGAAACAGAGCATGAGCCCACAAAAATGTTCTACAAAAAAG  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  AAGTATTTCTGAGTAATCTGGAAGAAACCTGCCCCATGACATGTATTCTCGGAAAGTGTGCTGTGTTGTCATTC  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  AAGGACTTCCTCTCCTGCAGGCCAACTGAAATACCAGAAAATGACATTCTGCTTTGTGAGAGCCGCTACAATGA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  GAGCGACAAGCAGATGAAGAAATTCAAAGGATTGAAGAGGTTTTCACTCTCTGCTAAAGTGGTAGATGATGAAA  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  TTTACTACTTCAGAAAACCAATTGTTCCTCAGAAGGAGCCATCACCTTTGCTGGAAAAGAAGATCCAGTTGCTA  3996

Query    1  ------------------------------------------------ATGGGAGAAGAAGATAGTGAGGTCAT  26
                                                            ||||||||||||||||||||||||||
Sbjct 3997  GAAGCTAAATTTGCCGAGTTAGAAGGTGGAGATGATGATATTGAAGAGATGGGAGAAGAAGATAGTGAGGTCAT  4070

Query   27  TGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCCAC  100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071  TGAACCTCCTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCCAC  4144

Query  101  AGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTAC  174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145  AGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAGTGGCTAC  4218

Query  175  ATCCTGTTCAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCG  248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4219  ATCCTGTTCAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGCTCAGCCG  4292

Query  249  CCTGGTGGGGACAGAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGA--------------------  302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||                    
Sbjct 4293  CCTGGTGGGGACAGAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGAAGAGCGGGCAGCTAAAGTTG  4366

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4367  CTGAGCAGCAGGAGAGAGAGCGAGCAGCACAGCAACAGCAGCCGAGTGCTTCTCCCCGAGCAGGCACCCCTGTG  4440

Query  303  -----------------------------------------------------------------------AGG  305
                                                                                   |||
Sbjct 4441  GGGGCTCTCATGGGGGTGGTGCCACCACCAACACCAATGGGGATGCTCAATCAGCAGTTGACACCTGTTGCAGG  4514

Query  306  CATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCA  379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4515  CATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGCA  4588

Query  380  TGCAGCCACTTCACCCTGGGGGGCCTCCACCCCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCA  453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589  TGCAGCCACTTCACCCTGGGGGGCCTCCACCCCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGGCATCCCA  4662

Query  454  CCACCGGGTGTGATGAACCAAGGAGTGGCCCCTATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACA  527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4663  CCACCGGGTGTGATGAACCAAGGAGTGGCCCCTATGGTAGGGACTCCAGCACCAGGTGGAAGTCCATATGGACA  4736

Query  528  ACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCAGGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCC  601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4737  ACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCAGGCACCACCTCCATATCCCGGCCCACATCCAGCTGGACCCC  4810

Query  602  CTGTCATACAGCAGCCAACAACACCCATGTTTGTAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAG  675
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4811  CTGTCATACAGCAGCCAACAACACCCATGTTTGTAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCACTCAGAG  4884

Query  676  GCCTACCTGAAATACATTGAAGGACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGC  749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4885  GCCTACCTGAAATACATTGAAGGACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGGGATCAGACACTGGCAGC  4958

Query  750  TCGAAGACGCGACGTCCATTTGTCGAAAGAACAGGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGG  823
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4959  TCGAAGACGCGACGTCCATTTGTCGAAAGAACAGGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGCAAAGGGG  5032

Query  824  CCCACACCACCATGGCAGATGCCCTCTGGCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAA  897
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5033  CCCACACCACCATGGCAGATGCCCTCTGGCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAA  5106

Query  898  GCATACAACCTAGAAAATGTT  918
            |||||||||||||||||||||
Sbjct 5107  GCATACAACCTAGAAAATGTT  5127

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