Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_15888
Subject:
XM_017316158.1
Aligned Length:
4986
Identities:
854
Gaps:
4068

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGTTCCAAGAGAAGAAGAGCCACCTCTCCTTCCAGCAGTGTCAGTGGAGACTTTGATGACGGGCACCATTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGTGCCTACACCAGGCCCAAGCAGGAAAAGGAGAAGACTGTCCAATCTTCCAACTGTAGATCCTATTGCTGTGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCATGAACTCTATAACACCATCCGAGACTATAAGGATGAACAGGGCAGACTCCTCTGTGAGCTGTTCATTAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTCCAAAGCGGAGAAATCAACCAGACTATTATGAAGTGGTTTCTCAGCCCATTGACTTGATGAAAATCCAACA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAAACTTAAAATGGAAGAGTATGATGATGTTAATCTACTGACTGCTGACTTCCAGCTGCTTTTTAACAATGCAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGGCCTACTATAAGCCAGATTCCCCTGAGTATAAAGCTGCTTGTAAACTCTGGGATTTGTACCTTCGAACAAGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AATGAGTTTGTTCAGAAAGGAGAAGCAGACGATGAAGATGATGACGAAGATGGGCAAGACAATCAAGGCACACT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGCTGACGGCTCTTCTCCAGGTTATCTGAAGGAGATCCTGGAGCAGCTTCTTGAAGCCATAGTTGTAGCCACAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATCCATCAGGACGGCTCATCAGTGAACTTTTTCAGAAACTGCCTTCCAAAGTGCAATATCCAGACTATTATGCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ATAATTAAGGAACCTATAGATCTCAAGACCATTGCTCAGAGGATACAGAATGGAAGCTACAAAAGTATACACGC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AATGGCCAAAGATATAGATCTTCTAGCAAAAAATGCCAAAACATACAATGAGCCTGGGTCTCAAGTATTCAAGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATGCCAATTCGATTAAAAAAATATTTTATATGAAAAAGGCAGAAATTGAACATCATGAAATGACTAAATCAAGT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CTTCGAATAAGTAATAAAAGAGCAGTCCAAGGGGGTCGCTTGTCAGCAATTACCATGGCACTTCAGTATGGATC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGAGAGTGAAGAGGACGCTGCTTTAGCTGCTGCACGCTATGAAGAAGGGGAATCTGAAGCAGAGAGCATCACTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCTTCATGGACGTTTCCAACCCCTTTCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGCAG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CTCATAGCTGAACCTTTCTTCCATTTGCCTTCAAAGAAAAAATACCCAGATTATTATCAGCAAATTAAAATGCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CATATCACTTCAACAGATCAGAACAAAGCTAAAGAACCAAGAATATGAAACTTTAGATCATTTGGAGTGTGATC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGAATTTAATGTTTGAAAATGCCAAACGTTATAACGTTCCCAATTCAGCCATCTATAAGCGAGTTCTAAAACTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CAGCAAGTCATGCAGGCAAAGAAGAAGGAGCTTGCGAGGAGAGATGACATTGAGGACGGAGACAGCATGATCTC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CTCAGCCACTTCTGACACTGGTAGTGCCAAAAGGAAAAGTAAAAAGAACATAAGAAAACAGCGAATGAAAATTT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TATTCAATGTTGTTCTTGAAGCTCGAGAGCCAGGTTCAGGCAGAAGACTTTGCGATCTATTTATGGTTAAGCCA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCCAAGAAGGACTATCCTGATTATTATAAAATCATCTTAGAGCCAATGGACCTGAAAATAATTGAGCATAACAT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CCGAAATGACAAATATGCAGGTGAAGAAGGAATGATGGAAGACATGAAACTCATGTTCCGCAATGCCAGGCACT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ACAATGAGGAGGGCTCCCAGGTATACAATGATGCCCATATCCTGGAGAAGTTACTCAAAGATAAAAGGAAAGAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CTGGGCCCTCTGCCTGATGATGATGACATGGCTTCTCCCAAACTTAAATTGAGTAGGAAGAGTGGTGTTTCTCC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TAAGAAATCAAAGTACATGACTCCAATGCAGCAGAAACTGAATGAAGTGTATGAAGCTGTAAAGAACTATACTG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  ATAAGAGGGGTCGCCGCCTTAGTGCTATATTTCTAAGACTCCCCTCTAGATCAGAGCTGCCTGACTACTACCTG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ACCATTAAAAAGCCCATGGACATGGAAAAAATTCGAAGTCACATGATGGCAAACAAGTACCAAGACATAGATTC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TATGGTAGAGGACTTTGTCATGATGTTTAATAATGCCTGTACCTACAATGAACCAGAGTCTTTGATCTACAAAG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ATGCCCTTGTACTGCATAAAGTCCTCCTTGAGACTCGGAGAGACCTGGAGGGAGATGAGGATTCTCATGTCCCT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AATGTGACGTTGCTGATTCAAGAGCTCATCCATAACCTTTTTGTGTCAGTCATGAGTCATCAGGATGACGAAGG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GAGGTGTTACAGCGACTCCTTAGCAGAAATTCCTGCTGTGGATCCCAACTCTCCCAATAAACCTCCCCTTACAT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TTGACATTATCAGGAAAAATGTTGAAAGTAATCGGTATCGGCGACTTGATTTATTTCAGGAGCATATGTTTGAA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GTATTGGAACGGGCAAGAAGGATGAACCGGACAGATTCCGAAATATATGAGGATGCTGTAGAACTTCAGCAGTT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TTTTATTAGAATTCGTGATGAACTCTGCAAAAATGGAGAGATCCTTCTTTCTCCAGCACTCAGCTATACCACAA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AACACTTGCATAACGATGTGGAAAAAGAAAAAAAGGAAAAATTGCCTAAAGAAATAGAGGAAGATAAACTAAAA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CGCGAAGAAGAAAAAAGAGAAGCTGAAAAAAGTGAAGATTCCTCAGGTACTACAGGCCTCTCAGGCTTACATCG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TACATACAGCCAGGACTGCAGCTTTAAGAACAGCATGTATCATGTCGGAGATTATGTCTATGTTGAACCTGCGG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AGGCCAATCTACAACCACATATAGTGTGTATTGAGAGACTGTGGGAGGATTCAGCTGGTGAAAAATGGTTGTAC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GGCTGTTGGTTTTATCGGCCAAATGAAACATTCCATTTGGCTACACGAAAATTTCTAGAAAAAGAAGTTTTTAA  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GAGTGACTACTACAATAAAGTACCTGTTAGTAAAATTCTAGGCAAATGTGTAGTCATGTTTGTCAAGGAATACT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  TTAAATTATGTCCAGAAAACTTTCGCGATGAGGATGTTTTTGTCTGTGAATCGAGGTATTCTGCCAAAACCAAA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  TCTTTTAAGAAAATTAAACTGTGGACCATGCCCATCAGTTCAGTTAGATTTGTCCCTCGGGATGTGCCTTTGCC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TGTGGTCCGAGTGGCCTCTGTGTTTGCAAATGCAGATAAAGGGGATGATGAGAAGAATACAGACAACTCAGATG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  ACAATAGAGCTGAAGACAATTTTAACTTGGAAAAGGAAAAAGAAGATGTTCCTGTGGAGATGTCCAATGGTGAG  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CCAGGTTGCCACTACTTTGAGCAGCTTCGGTACAATGACATGTGGCTGAAGGTTGGTGATTGTGTCTTCATCAA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  ATCCCACGGCTTGGTGCGCCCTCGTGTGGGCAGAATTGAGAAAGTATGGGTCCGAGATGGAGCTGCATATTTTT  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  ATGGCCCTATCTTCATTCATCCAGAAGAAACAGAACATGAGCCCACAAAAATGTTCTACAAAAAAGAAGTGTTT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CTGAGTAATCTGGAAGAGACCTGCCCTATGAGTTGTATTCTGGGGAAATGTGCAGTGCTGTCATTCAAGGACTT  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  CCTCTCCTGCAGGCCAACTGAAATACCAGAAAATGACATTCTGCTTTGTGAGAGCCGCTATAATGAGAGTGACA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  AGCAGATGAAGAAGTTCAAGGGTTTGAAGAGGTTTTCACTCTCTGCTAAAGTTGTAGATGATGAAATCTACTAC  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  TTCAGAAAACCAATCATTCCTCAGAAGGAACCCTCACCTTTGTTAGAAAAGAAGATACAATTGCTAGAAGCTAA  3848

Query    1  ----------------------------------------ATGGGAGAAGAAGATAGTGAGGTCATTGAACCTC  34
                                                    |||||||||||.||||||||.|||||||||.|||
Sbjct 3849  ATTTGCAGAGTTAGAAGGAGGAGATGATGATATTGAGGAGATGGGAGAAGAGGATAGTGAAGTCATTGAAGCTC  3922

Query   35  CTTCTCTACCTCAGCTTCAGACCCCCCTGGCCAGTGAGCTGGACCTCATGCCCTACACACCCCC----------  98
            |.|||||||||||.||.|||||.||||||||||.||||.||||||||||||||||.||||||||          
Sbjct 3923  CATCTCTACCTCAACTGCAGACACCCCTGGCCAATGAGTTGGACCTCATGCCCTATACACCCCCACAGCTTTCT  3996

Query   99  -----ACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAGGCTCCAAACGGAAAATCAACATGAG  167
                 |||||||||||||||||||||||||||||||||||||||||||.|.||.|||||.||||||||||||||
Sbjct 3997  GTCTTACAGTCTACCCCAAAGTCTGCCAAAGGCAGTGCAAAGAAGGAAAGTTCTAAACGAAAAATCAACATGAG  4070

Query  168  TGGCTACATCCTGTTCAGCAGTGAGATGAGGGCTGTGATTAAGGCCCAACACCCAGACTACTCTTTCGGGGAGC  241
            |||||||||..|||||||||||||.|||||.|||||||||||.|||||.|||||||||||||||||.|||||||
Sbjct 4071  TGGCTACATTTTGTTCAGCAGTGAAATGAGAGCTGTGATTAAAGCCCAGCACCCAGACTACTCTTTTGGGGAGC  4144

Query  242  TCAGCCGCCTGGTGGGGACAGAATGGAGAAATCTTGAGACAGCCAAGAAAGCAGAATATGA-------------  302
            |||||.|.|||||||||||||||||||||||.|||||.|||||||||||||||||||||||             
Sbjct 4145  TCAGCAGACTGGTGGGGACAGAATGGAGAAACCTTGAAACAGCCAAGAAAGCAGAATATGAAGAGCGGGCAGCT  4218

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4219  AAAGTTGCTGAGCAGCAGGAGAGAGAGCGAGCAGCACAGCAACAGCAGCCGAGTGCTTCTCCCCGAGCAGGCAC  4292

Query  303  --------------------------------------------------------------------------  302
                                                                                      
Sbjct 4293  CCCTGTGGGGGCTCTCATGGGGGTGGTGCCACCACCAACACCAATGGGGATGCTCAATCAGCAGTTGACACCTG  4366

Query  303  ----AGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATG  372
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4367  TTGCAGGCATGATGGGTGGCTATCCGCCAGGCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATG  4440

Query  373  GGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCCCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCGGG  446
            ||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||
Sbjct 4441  GGCAGCATGCAGCCACTTCACCCTGGGGGGCCTCCACCTCACCATCTTCCGCCAGGTGTGCCTGGCCTCCCAGG  4514

Query  447  CATCCCACCACCGGGTGTGATGAACCAAGGAGTGGCCCCTATGGTAGGGACTCCAGCACCAGGTGGAAGTCCAT  520
            ||||||||||||||||||||||||.||||||||.|||||.||||||||||||||||||||||||||||||||.|
Sbjct 4515  CATCCCACCACCGGGTGTGATGAATCAAGGAGTAGCCCCCATGGTAGGGACTCCAGCACCAGGTGGAAGTCCGT  4588

Query  521  ATGGACAACAGGTGGGAGTTTTGGGGCCTCCAGGGCAGCAGGCACCACCTCCATATCCCGGCCCACATCCAGCT  594
            |||||||||||||.|||||||||||.||||||||||||||||||||||||||||||||.||.||.|||||||||
Sbjct 4589  ATGGACAACAGGTAGGAGTTTTGGGACCTCCAGGGCAGCAGGCACCACCTCCATATCCTGGTCCTCATCCAGCT  4662

Query  595  GGACCCCCTGTCATACAGCAGCCAACAACACCCATGTTTGTAGCTCCCCCACCAAAGACCCAGCGGCTTCTTCA  668
            ||.||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||..|||||||.||
Sbjct 4663  GGCCCCCCTGTCATACAGCAGCCAACAACGCCCATGTTTGTGGCTCCCCCACCAAAGACCCAAAGGCTTCTCCA  4736

Query  669  CTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCGGAGTCCAACAGCATTAGCAAGTGGGATCAGACAC  742
            |||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||.||.||..
Sbjct 4737  CTCAGAGGCCTACCTGAAATACATTGAAGGACTCAGTGCTGAATCCAACAGCATTAGCAAGTGGGACCAAACTT  4810

Query  743  TGGCAGCTCGAAGACGCGACGTCCATTTGTCGAAAGAACAGGAGAGCCGCCTACCCTCTCACTGGCTGAAAAGC  816
            ||||||||||||||||.||.|||||||||||.|||||||||||||||||||||||.|||||||||||.|||||.
Sbjct 4811  TGGCAGCTCGAAGACGGGATGTCCATTTGTCCAAAGAACAGGAGAGCCGCCTACCTTCTCACTGGCTCAAAAGT  4884

Query  817  AAAGGGGCCCACACCACCATGGCAGATGCCCTCTGGCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACAT  890
            ||||||||.||||||||||||||||||||||||||||||||.||.|||||.|||||.||.|||||.||||||||
Sbjct 4885  AAAGGGGCACACACCACCATGGCAGATGCCCTCTGGCGCCTACGGGATTTAATGCTTCGAGACACTCTCAACAT  4958

Query  891  TCGCCAAGCATACAACCTAGAAAATGTT  918
            .||.||.|||||||||||||||||||||
Sbjct 4959  CCGACAGGCATACAACCTAGAAAATGTT  4986

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