Nucleotide Global Alignment
Description
- Query:
- TRCN0000465299
- Subject:
- XR_381536.2
- Aligned Length:
- 2405
- Identities:
- 1222
- Gaps:
- 1051
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGCGCGCACGCGCTAAATGCCCAAGCGAAGAAGTCACGCAGGCTTCTTCTGGCCTTTAGAAATCCGGCTTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAGCTGCGACACCTCCCCAAGGCTTCCGCCCGTGCCCAAGATGGCGTCCAGGCGTCCTAATTAACTTCCACCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCTTGGCGAAGTCTGACGTCGCGGCTGGCAGTGGGTGGAGCTCTTAACAAACTGCAAATGTAGGGTCCTCTGA 222
Query 1 -------------ATGGACTGGAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAAAA 61
||||||||||||||.||.|||||.|||||..|||||.||||||||||...||||||.|..|
Sbjct 223 GCGGGAGTCAACCATGGACTGGAAAGACGTGCTTCGCCGGCGGTTAGCGTCGCCCAACACGGATCCAAAGAGGA 296
Query 62 AAAAAAGTGAACAAGAATTAAAAGATGAAGAAATGGATTTATTTACAAAATATTACTCCGAATGGAAAGGAGGT 135
|||||||.||||||||||||||||||||||||||||||||||||||.|||||.|||||.||.||||||||||||
Sbjct 297 AAAAAAGCGAACAAGAATTAAAAGATGAAGAAATGGATTTATTTACCAAATACTACTCAGAGTGGAAAGGAGGT 370
Query 136 AGAAAAAACACAAATGAATTCTATAAGACCATTCCCCGGTTTTATTATAGGCTGCCTGCTGAAGATGAAGTCTT 209
||||||||||||||.||.||||||||||||||.||||||||||||||.|||.||||.|||||||||||||||||
Sbjct 371 AGAAAAAACACAAACGAGTTCTATAAGACCATACCCCGGTTTTATTACAGGTTGCCAGCTGAAGATGAAGTCTT 444
Query 210 ACTACAGAAATTAAGAGAGGAATCAAGAGCTGTCTTTCTACAAAGAAAAAGCAGAGAACTGTTAGATAATGAAG 283
|||||||||||||.||||||||||.|||||||||||||||||.||.||||||||||||||.||||||||.||||
Sbjct 445 ACTACAGAAATTACGAGAGGAATCTAGAGCTGTCTTTCTACAGAGGAAAAGCAGAGAACTCTTAGATAACGAAG 518
Query 284 AATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGATCAAT 357
|.||.|||||||||||||||||||||||.||||||||||.||||||||||||||||||||||||.|||||||||
Sbjct 519 AGTTGCAGAACTTATGGTTTTTGCTGGATAAACACCAGATACCACCTATGATTGGAGAGGAAGCAATGATCAAT 592
Query 358 TACGAAAACTTTTTGAAGGTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTGC 431
||.|||||.|||||||||||||||||||||||||||.|||||||||||||||||||.||.||||||||||||||
Sbjct 593 TATGAAAATTTTTTGAAGGTTGGTGAAAAGGCTGGACCAAAGTGCAAGCAATTTTTTACTGCAAAAGTCTTTGC 666
Query 432 TAAACTCCTTCATACAGATTCATATGGAAGAATTTCCATCATGCAGTTCTTTAATTATGTCATGAGAAAAGTTT 505
.|||||||||||||||||||||||||||.|||||||||||||||||||||||||.||.||||||.|||||||||
Sbjct 667 CAAACTCCTTCATACAGATTCATATGGACGAATTTCCATCATGCAGTTCTTTAACTACGTCATGCGAAAAGTTT 740
Query 506 GGCTTCATCAAACAAGAATAGGACTCAGTTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTA 579
||||.|||||.|||||||||||||||||||||||||||||.|||||.||.||.||||||||||||||.||..|.
Sbjct 741 GGCTGCATCAGACAAGAATAGGACTCAGTTTATATGATGTTGCTGGCCAAGGATACCTTCGGGAATCAGACCTG 814
Query 580 GAAAACTACATATTGGAACTTATCCCTACGTTGCCACAATTAGATGGTCTGGAAAAATCTTTCTACTCCTTTTA 653
||.||||||||..||||.||.|||||.|||.|||||||..|.||.||.|||||.||.||.|||||||||||.||
Sbjct 815 GAGAACTACATCCTGGAGCTGATCCCGACGCTGCCACAGCTGGACGGGCTGGAGAAGTCCTTCTACTCCTTCTA 888
Query 654 TGTTTGTACAGCAGTTAGGAAGTTCTTCTTCTTTTTAGATCCTTTAAGAACAGGAAAGATAAAAATTCAAGATA 727
|||.||.||.|||||.|||||||||||||||||.||.||.|||.||||||||||.|||||.|||||||||||||
Sbjct 889 TGTCTGCACTGCAGTCAGGAAGTTCTTCTTCTTCTTGGACCCTCTAAGAACAGGGAAGATCAAAATTCAAGATA 962
Query 728 TTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAACTGTCCAAGGAGAGTCAAGAAACA 801
||||.||||||||.||.||||||||||||.||||||||||.|||||||||.|||||||.||.||||||||||||
Sbjct 963 TTTTGGCATGCAGTTTTCTAGATGATTTACTGGAGCTAAGAGATGAGGAATTGTCCAAAGAAAGTCAAGAAACA 1036
Query 802 AATTGGTTTTCTGCTCCTTCTGCCCTAAGAGTTTATGGCCAGTACTTGAATCTTGATAAAGATCACAATGGCAT 875
||||||||||||||||||||||||||.||.||.||| |||.||||||||||||||||||||.||||||||
Sbjct 1037 AATTGGTTTTCTGCTCCTTCTGCCCTGAGGGTCTAT-----GTATTTGAATCTTGATAAAGATCATAATGGCAT 1105
Query 876 GCTCAGTAAAGAAGAACTCTCACGCTATGGAACAGCTACCATGACCAATGTCTTCTTAGACCGTGTTTTCCAGG 949
|||.||||||||.||.|||||.||.||.||||||||.||||||||||||||||||||||||||.||||||||||
Sbjct 1106 GCTAAGTAAAGAGGAGCTCTCCCGTTACGGAACAGCAACCATGACCAATGTCTTCTTAGACCGAGTTTTCCAGG 1179
Query 950 AGTGTCTCACTTATGATGGAGAAATGGACTATAAGACCTACTTGGACTTTGTCCTTGCATTAGAAAACAGAAAG 1023
|||||||||||||.|||||||||||||||||||||||||||.||||||||||.|||||.|||||||||||||||
Sbjct 1180 AGTGTCTCACTTACGATGGAGAAATGGACTATAAGACCTACCTGGACTTTGTTCTTGCCTTAGAAAACAGAAAG 1253
Query 1024 GAACCTGCAGCTCTACAATATATTTTCAAACTGCTTGATATTGAGAACAAAGGATACCTGAATGTCTTTTCACT 1097
||.|||||||||||.||.||.||||||||||||||.||.|||||||||||.||||||||||||||||||||.||
Sbjct 1254 GAGCCTGCAGCTCTGCAGTACATTTTCAAACTGCTGGACATTGAGAACAAGGGATACCTGAATGTCTTTTCCCT 1327
Query 1098 TAATTATTTCTTTAGGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTCATTTCAAGATGTCA 1171
||||||||||||||||||||||||.|||||||||||||||||||||||.||||||||.||||||||||||||||
Sbjct 1328 TAATTATTTCTTTAGGGCCATACAAGAACTAATGAAAATCCATGGACAGGATCCTGTGTCATTTCAAGATGTCA 1401
Query 1172 AGGATGAAATCTTTGACATGGTAAAACCAAAGGATCCTTTGAAAATCTCTCTTCAGGATTTAATCAACAGTAAT 1245
||||||||||||||||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 1402 AGGATGAAATCTTTGACATGGTCAAACCAAAGGATCCTTTGAAAATCTCACTTCAGGATTTAATCAACAGTAAT 1475
Query 1246 CAAGGAGACACAGTAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGT 1319
||||||||||||||.||.|||||||||||.|||.|.||||||||||||||.||||||||||||||.||.|||||
Sbjct 1476 CAAGGAGACACAGTCACTACCATTCTAATTGATCTCAATGGCTTCTGGACCTACGAGAACAGAGAAGCCCTTGT 1549
Query 1320 TGCAAATGACAGTGAAAACTCTGCAGACCTNGATGATACA---------------------------------- 1359
|||||||||||..||.|||||||||||.||.|||||.|||
Sbjct 1550 TGCAAATGACAACGAGAACTCTGCAGATCTTGATGACACATGATCTCTGCAAAATAGACTTCTTCATAAAGATG 1623
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1624 CTTGAATGCTGCATGCAACACTGTTGAAGCAGAATCCTTAGAAACGTTCTAAATAAAACTCATCACATGCCTGT 1697
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1698 ACAACACAGCAAATATCTTGCTTACTAGAGTGTTGGTTGCAGTCAGAACAATTTGAAAGTAATAGGACCAACTA 1771
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1772 TTGGTTTTTTATTAAGTGGTAAAGTAAGTCCTAGTTCTGTCTAACTCAGAAATGGAAAGTAAGATTTGCTGTAG 1845
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1846 TTAGCCGTGGAGTTTATTCATGTGGAATTACAATATTTGTTCTTCAAGAAGATTGGGGACAGGAGACTTCCCAT 1919
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1920 CAGAGTAGCACCATTGCATTTCTGATTCAAAGCTTTAGGTGTGGCTTTGGTTGTTTTGAGACATGGTCTCACTA 1993
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1994 TGTAGCCCTGACTGGCCTGGAACTTGCTATGTGGACCAAGTTGGCCTTTAACCTTGAACTCTTAAGAGAGACAC 2067
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2068 CTGCCTCTGCCTCCCAGGTGCTGAGGTTAAAGGTGAGTGCCTCTGTGCCTATCGTTTTTGGGGTTTTTGTTGTT 2141
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2142 GTTTTTGTATTTCTTGTGTGTGCACACCAGAGCACACATGGAGGTCAGTAGACATTGTTGTGATTCTTGCCTTT 2215
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2216 CCCCACGTGGGTTCTGGAGATCAGATTCAGGTTCTCGGCTTCCCAGCAAGCGCTTGTACCCAGCATCCTCTTGC 2289
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 2290 CTTCCCAAGATTTTTTTGTTTTGTTTTTTTTGTTTTTTTAAATATAGTGTTTTCAAAGAAAGTATTCAAACAAA 2363
Query 1360 ------------------------------------- 1359
Sbjct 2364 CTATTTTGTTTTATTAAACTCATCAGATTGAATGAGA 2400
