Nucleotide Global Alignment

Description

Query:
TRCN0000466010
Subject:
NR_147241.1
Aligned Length:
1658
Identities:
627
Gaps:
946

Alignment

Query    1  -----------------------ATGTCTGCTGAAGTCATCCA--TCAGGTTGAAGAAGCACTTGATA--CAG-  46
                                   .||||       |.||||||  .|.||||        |||..|||  ||| 
Sbjct    1  TTTACTCCTAACGCGTGGAACTTGTGTC-------GACATCCACCCCCGGTT--------ACTGCATACTCAGT  59

Query   47  ----------ATGAGAAGGAGATGCTGCTCTTTTTGTGCCGGGATGTTGC-----TATAGATGTGGTTC-CACC  104
                      || ||.||||.|                |.|.||..||||     .|..||.|.|  || ||.|
Sbjct   60  CACACAAGCCAT-AGCAGGAAA----------------CAGCGAGCTTGCAGCCTCACCGACGAG--TCTCAAC  114

Query  105  TAATGTCAGGGACCTTCTGGATATTTTACGGGAAAGAGGTAAGCTGTCTGTCGGGGACTTGGCTGAACTGCTCT  178
            |||   .||||| ||.|.|||          |..||.|||            |||||||.|||       ||| 
Sbjct  115  TAA---AAGGGA-CTCCCGGA----------GCTAGGGGT------------GGGGACTCGGC-------CTC-  154

Query  179  ACAGAGTGA-----GGCGATTTGAC-------------CTGCTCAAACGTATCTTGAAGATGGAC----AGAAA  230
            |||.|||||     |||.|||.|||             |.|||.|.||        ||.|.||||    .||..
Sbjct  155  ACACAGTGAGTGCCGGCTATTGGACTTTTGTCCAGTGACAGCTGAGAC--------AACAAGGACCACGGGAGG  220

Query  231  AGCTGT-GGAGA----------------------CCCA---------CCTGCT--CAGGAAC------------  258
            ||.||| |||||                      ||||         || |||  ||||  |            
Sbjct  221  AGGTGTAGGAGAGAAGCGCCGCGAACAGCGATCGCCCAGCACCAAGTCC-GCTTCCAGG--CTTTCGGTTTCTT  291

Query  259  --CCT-CACCTTG-------TTTC--------------------------------------------------  272
              ||| ||.||||       .|||                                                  
Sbjct  292  TGCCTCCATCTTGGGTGCGCCTTCCCGGCGTCTAGGGGAGCGAAGGCTGAGGTGGCAGCGGCAGGAGAGTCCGG  365

Query  273  --------GGACTATAGAGTGCTGATGGCAGAGATTGGTGAGGATTTGGATAAATCTGATGTGTCCTCATTAAT  338
                    ||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  366  CCGCGACAGGAC----GAGTGCTGATGGCAGAGATTGGTGAGGATTTGGATAAATCTGATGTGTCCTCATTAAT  435

Query  339  TTTCCTCATGAAGGATTACATGGGCCGAGGCAAGATAAGCAAGGAGAAGAGTTTCTTGGACCTTGTGGTTGAGT  412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  436  TTTCCTCATGAAGGATTACATGGGCCGAGGCAAGATAAGCAAGGAGAAGAGTTTCTTGGACCTTGTGGTTGAGT  509

Query  413  TGGAGAAACTAAATCTGGTTGCCCCAGATCAACTGGATTTATTAGAAAAATGCCTAAAGAACATCCACAGAATA  486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  510  TGGAGAAACTAAATCTGGTTGCCCCAGATCAACTGGATTTATTAGAAAAATGCCTAAAGAACATCCACAGAATA  583

Query  487  GACCTGAAGACAAAAATCCAGAAGTACAAGCAGTCTGTTCAAGGAGCAGGGACAAGTTACAGGAATGTTCTCCA  560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  584  GACCTGAAGACAAAAATCCAGAAGTACAAGCAGTCTGTTCAAGGAGCAGGGACAAGTTACAGGAATGTTCTCCA  657

Query  561  AGCAGCAATCCAAAAGAGTCTCAAGGATCCTTCAAATAACTTCAGGCTCCATAATGGGAGAAGTAAAGAACA--  632
            ||||||||||||||||||||||||||||||||||||||||||||||       |||          |.||||  
Sbjct  658  AGCAGCAATCCAAAAGAGTCTCAAGGATCCTTCAAATAACTTCAGG-------ATG----------ATAACACC  714

Query  633  --AAGACTTAAGGAACAGCTTGGCGCTCAACAAGAACCAGTGAA--------GAAA----TCCAT-TCAGGAAT  691
              |.|.|        ||  |||.| ||.|.|         ||||        ||||    ||||| |.|..|| 
Sbjct  715  CTATGCC--------CA--TTGTC-CTGATC---------TGAAAATTCTTGGAAATTGTTCCATGTGATTAA-  767

Query  692  CA--GAAGCTTTTTTGCCTCAGAGCATACCTGAAGAGAGATACAAGATGAAGAGCAAGCCCCTAGGAATCTGCC  763
            ||  |||      .||||||      |||.|                        ||.|       |.||||..
Sbjct  768  CATGGAA------CTGCCTC------TACTT------------------------AATC-------ATTCTGAA  798

Query  764  TGAT--AATCGATTGCATTGGC--AATG----AGACAGAGCTTCTTCGAGACACCTTCACTTCCCTG-GGCTAT  828
            ||||  ||||| ||.||||..|  ||||    |.|..|.|.||     ||       |.|||.|.|| .|||.|
Sbjct  799  TGATTAAATCG-TTTCATTTTCTAAATGTGTTATAATGTGTTT-----AG-------CCCTTTCTTGTTGCTGT  859

Query  829  GAAGTCCAGAAATTCTTGC--ATCT--------CAGTATGCATGGTATATCCCAGATTCTTGGCCAATTTGCCT  892
             |.||..||  ||.|||.|  ||||        .|.||...|||.||||    |.||       .|||.|.|.|
Sbjct  860  -ATGTTTAG--ATGCTTTCCAATCTTTTGTTACTACTAATAATGCTATA----AAAT-------AAATATCCTT  919

Query  893  GTATGCCCGAGCACCGAGACTACGACAGCTTTGTGTGTGTCCTGGTGAGCCGAGGAGGCTCCCAGAGTGTGTAT  966
            ||                      ||..|||||                                         
Sbjct  920  GT----------------------ACTTCTTTG-----------------------------------------  930

Query  967  GGTGTGGATCAGACTCACTCAGGGCTCCCCCTGCATCACATCAGGAGGATGTTCATGGGAGATTCATGCCCTTA  1040
                                                                                      
Sbjct  931  --------------------------------------------------------------------------  930

Query 1041  TCTAGCAGGGAAGCCAAAGATGTTTTTTATTCAGAACTATGTGGTGTCAGAGGGCCAGCTGGAGGACAGCAGCC  1114
                                                                                      
Sbjct  931  --------------------------------------------------------------------------  930

Query 1115  TCTTGGAGGTGGATGGGCCAGCGATGAAGAATGTGGAATTCAAGGCTCAGAAGCGAGGGCTGTGCACAGTTCAC  1188
                                                                                      
Sbjct  931  --------------------------------------------------------------------------  930

Query 1189  CGAGAAGCTGACTTCTTCTGGAGCCTGTGTACTGCGGACATGTCCCTGCTGGAGCAGTCTCACAGCTCACCATC  1262
                                                                                      
Sbjct  931  --------------------------------------------------------------------------  930

Query 1263  CCTGTACCTGCAGTGCCTCTCCCAGAAACTGAGACAAGAAAGAAAACGCCCACTCCTGGATCTTCACATTGAAC  1336
                                                                                      
Sbjct  931  --------------------------------------------------------------------------  930

Query 1337  TCAATGGCTACATGTATGATTGGAACAGCAGAGTTTCTGCCAAGGAGAAATATTATGTCTGGCTGCAGCACACT  1410
                                                                                      
Sbjct  931  --------------------------------------------------------------------------  930

Query 1411  CTGAGAAAGAAACTTATCCTCTCCTACACA  1440
                                          
Sbjct  931  ------------------------------  930

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