Nucleotide Global Alignment
Description
- Query:
- TRCN0000466080
- Subject:
- XM_017313616.1
- Aligned Length:
- 3558
- Identities:
- 1334
- Gaps:
- 2055
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCAAGCTTCCCCCACCCCGTCTTCCACCCATGTGTGTCAACCCTGCCCCTGGAGGGACCATCACTCGAGGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAACGTTAACATTTCCAACATGGCAGCTTCTAGGGACCTATTAAAAGAGTTTCCGCAGCCTAAAAACCTTCTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACAGCGTGATTGGAAGAGCCCTTGGCATCTCACATGCAAAAGACAAGTTAGTCTATGTGCACACGAATGGACCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGAAAAAGAAAGTCACCCTGCACATAAAGTGGCCCAAGAGCGTGGAGGTGGAAGGCTATGGCAGCAAGAAGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGATGCTGAGCGTCAGGCTGCAGCAGCTGCCTGCCAACTCTTCAAGGGCTGGGGTCTGCTGGGACCACGGAATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCTGTTTGATGCAGCTAAATACCGAGTGCTAGCTGATCGTTTTGGGTCTCCAGCTGACAGCTGGTGGCGCCCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAACCCACCATGCCTCCAACTTCCTGGCGGCAGCTGAATCCTGAGAACATTCGGCCAGGGGGTCCTGCAGGACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCCCGATCCTTAGGCCGAGAGGAAGAGGAAGATGAGGAGGAAGAGCTAGAAGAGGGGACCATTGATGTGACAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGTTTCTGTCTATGACCCAGCAAGACTCCCACAACCCACTCAGGGACTCAAGGGGGGGCTCCTTTGAAATGACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATGATGACAGTGCTATCAGAGCTCTGACCCAGTTTCCACTTCCCAAGAACCTCCTGGCCAAAGTGATTCAGAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCAACCTCCTCCTCCACAGCTAAGAATCTCATGCAGTTCCATACTGTGGGTACCAAGACCAAGCTGGCTACAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCACTCTGCTCTGGCCCTGTCCCATGACCTTTGTTGCCAAAGGGCGACGCAAAGCTGAGGCTGAGAATAAGGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCAGCCTTGGCTTGCAAGAAACTGAAGAGCCTTGGCCTTGTGGACAGGAACAATGAGCCGCTTACCCATGCCAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTACAACCTGGCCTCCCTGCGTGAGTTGGGTGAGACCCAGCGCCGGCCATGTACCATCCAGGTGCCTGAGCCCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCCTTCGCAAGATAGAGGCCTTCCTGAGTCATTACCCGGTGGACAGCTCATGGATTTCCCCAGAACTCCGACTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGAGTGATGACATCTTGCCCTTAGGCAAGGACTCAGGGCCCTTGAGTGACCCTATCACAGGCAAGCCATACAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCCCCTGTCAGAAGCAGAGGAGGTGCGCTTAAGCCAGAGCCTGCTAGAGCTGTGGCGGAGGAGAGGGCCGATCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGCAGGAGGCCCCGCAGCTACCTGTAGACCCTCATCGGGACACTATCCTCAGTGCCATTGAACAACACCCAGTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTAGTCATCTCTGGGGACACAGGCTGTGGGAAGACCACACGTATCCCTCAGCTGCTATTGGAGCGCTATGTGAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGAGGGTCGAGGTGCCCGCTGCAATGTGATCATCACACAACCTCGCCGGATCTCAGCTGTGTCTGTGGCACAGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGTCAGCCATGAACTGGGCCCCTCCTTGCGCCGGAATGTGGGCTTCCAGGTACGCTTGGAAAGTAAGCCCCCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCCCGAGGTGGGGCGCTGCTCTTCTGCACTGTGGGTATCCTGCTTCGGAAGCTGCAGAGCAACCCCAGCCTGGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGGTGTGAGCCATGTCATTGTGGATGAGGTCCATGAGCGGGATGTGAACACAGACTTCCTGCTGATTCTGCTCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGGCCTGCAGCGGCTCAACCCAGCTCTTCGGCTGGTGCTCATGAGTGCTACAGGAGATAATGAGCGCTTTTCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGATACTTTGGGGGCTGCCCTGTTATCAAGGTACCTGGCTTCATGTATCCCGTCAAGGAACACTACCTGGAGGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CATCTTGGCCAAGCTGGGTAAACATCAGTACCCACACCGGCATCGGCACCATGAGTCGGAAGATGAATGTGCAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTGATTTGGACCTTGTGACTGACCTGGTTCTGCATATCGATGCCCGTGGGGAACCAGGTGGGATCCTGTGCTTT 1998
Query 1 ---------------------------------------------------------ATGCACGAGAGCAAGTA 17
|||||.||.||||||||
Sbjct 1999 CTACCTGGCTGGCAAGAAATCAAAGGAGTGCAACAACGGCTCCAGGAGGCCCTGGGCATGCATGAAAGCAAGTA 2072
Query 18 CCTCATCCTGCCAGTGCACTCCAACATCCCCATGATGGATCAGAAGGCCATATTCCAGCAGCCTCCAGTTGGGG 91
|||||||.|.||||||||||||||.||||||||||||||.|||||||||||||||||.|||||||||.||||||
Sbjct 2073 CCTCATCTTACCAGTGCACTCCAATATCCCCATGATGGACCAGAAGGCCATATTCCAACAGCCTCCACTTGGGG 2146
Query 92 TGCGCAAGATTGTCTTGGCCACCAACATTGCTGAGACTTCCATCACAATCAATGACATCGTGCATGTGGTGGAC 165
|.|||||||||||.||||||||||||||||||||.||.|||||||||.|.||.|||||.||.|||||.||||||
Sbjct 2147 TACGCAAGATTGTATTGGCCACCAACATTGCTGAAACCTCCATCACAGTTAACGACATTGTACATGTCGTGGAC 2220
Query 166 AGTGGGCTGCACAAGGAAGAACGCTATGACCTGAAGACCAAGGTGTCCTGCCTGGAGACAGTGTGGGTATCAAG 239
||.||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||.||.||
Sbjct 2221 AGCGGTCTGCACAAGGAGGAACGCTATGACCTGAAGACCAAGGTGTCCTGCCTGGAGACTGTGTGGGTGTCGAG 2294
Query 240 AGCCAATGTGATCCAGCGCCGGGGCCGGGCGGGCCGCTGCCAGTCCGGCTTTGCCTACCACTTGTTCCCTCGAA 313
|||.|||||.||.||||||||||||.||||.||||||||||||||.||.||||||||||||||||||||..|.|
Sbjct 2295 AGCAAATGTCATTCAGCGCCGGGGCAGGGCAGGCCGCTGCCAGTCAGGTTTTGCCTACCACTTGTTCCCGAGGA 2368
Query 314 GCCGGCTGGAGAAAATGGTCCCTTTCCAAGTGCCAGAGATCCTGCGCACACCTCTTGAGAACCTGGTGCTGCAA 387
|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GCCGGCTGGAGAAAATGGTTCCTTTCCAAGTGCCAGAGATCCTGCGCACACCTCTTGAGAACCTGGTGCTGCAA 2442
Query 388 GCGAAAATCCACATGCCTGAGAAGACGGCGGTGGAGTTCCTGTCCAAGGCTGTGGACAGTCCAAACATCAAGGC 461
||.||||||||.|||||||||||||||||.|||||||||||.||.||||||||||||||||||||.||||||||
Sbjct 2443 GCCAAAATCCATATGCCTGAGAAGACGGCAGTGGAGTTCCTCTCTAAGGCTGTGGACAGTCCAAATATCAAGGC 2516
Query 462 AGTGGACGAGGCTGTGATCTTGCTCCAGGAGATCGGGGTGCTGGACCAGCGGGAGTACCTGACTACCCTGGGGC 535
||||||.|||||.||||||.|||||||||||||.|||||||||||||||||||||||.|||||.|||.||||.|
Sbjct 2517 AGTGGATGAGGCCGTGATCCTGCTCCAGGAGATTGGGGTGCTGGACCAGCGGGAGTATCTGACCACCTTGGGAC 2590
Query 536 AGCGCCTGGCTCACATCTCCACCGACCCCCGGTTGGCCAAGGCCATTGTGTTGGCTGCCATCTTCCGTTGCCTG 609
||||||||||.||||||||.||.||||||||..|||||||||||||.|||||||||||||||||||||||||||
Sbjct 2591 AGCGCCTGGCCCACATCTCTACTGACCCCCGACTGGCCAAGGCCATAGTGTTGGCTGCCATCTTCCGTTGCCTG 2664
Query 610 CACCCACTACTGGTGGTCGTTTCCTGCCTCACCCGGGACCCCTTCAGCAGCAGCCTACAGAACCGGGCAGAGGT 683
||||||||.||||||||.|||||||||||.|||||||||||||||||||||||..|.||||||||||||||.||
Sbjct 2665 CACCCACTGCTGGTGGTTGTTTCCTGCCTTACCCGGGACCCCTTCAGCAGCAGTTTGCAGAACCGGGCAGAAGT 2738
Query 684 GGACAAGGTGAAAGCACTGTTGAGCCATGACAGCGGCAGTGACCACCTGGCCTTTGTGCGGGCTGTCGCCGGCT 757
.|||||||||||.|||.||.|||||||||||||.|||||||||||..|||||||.|||||||||||.||.||||
Sbjct 2739 AGACAAGGTGAAGGCATTGCTGAGCCATGACAGTGGCAGTGACCATTTGGCCTTCGTGCGGGCTGTGGCTGGCT 2812
Query 758 GGGAGGAGGTGCTGCGTTGGCAGGACCGCAGCTCCCGGGAGAATTACCTGGAGGAAAACCTGCTGTACGCACCC 831
||||||||||.|||||.|||||||||||.|.||||.||||.||.||||||||.||||||||.|||||.||.|||
Sbjct 2813 GGGAGGAGGTACTGCGCTGGCAGGACCGTACCTCCAGGGAAAACTACCTGGAAGAAAACCTTCTGTATGCCCCC 2886
Query 832 AGCCTGCGCTTCATCCACGGACTCATCAAGCAGTTCTCAGAGAACATTTATGAGGCCTTCCTGGTGGGGAAGCC 905
|||.||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct 2887 AGCTTGCGCTTCATCCACGGGCTCATCAAGCAGTTCTCAGAGAACATTTATGAGGCTTTCCTAGTGGGGAAGCC 2960
Query 906 CTCGGACTGCACCCTGGCCTCCGCCCAGTGCAACGAGTACAGTGAGGAGGAGGAGCTGGTGAAGGGCGTGCTGA 979
|||.||||||||.|||.||||.||.||||||||.||||||||.|||||.|||||||||||||||||.|||||||
Sbjct 2961 CTCTGACTGCACACTGCCCTCTGCTCAGTGCAATGAGTACAGCGAGGAAGAGGAGCTGGTGAAGGGTGTGCTGA 3034
Query 980 TGGCCGGCCTCTACCCCAACCTCATCCAGGTGAGGCAGGGCAAGGTCACCCGGCAGGGGAAGTTCAAGCCCAAC 1053
||||.|||||||||||||||||||||||||||||.||.||.|||||.||.|||||.||.||||||||.||||||
Sbjct 3035 TGGCTGGCCTCTACCCCAACCTCATCCAGGTGAGACAAGGTAAGGTTACTCGGCAAGGCAAGTTCAAACCCAAC 3108
Query 1054 AGCGTCACATATAGGACCAAATCAGGCAACATCCTGCTGCACAAGTCGACCATTAACAGGGAGGCCACACGGTT 1127
||.|||||.||.|||||||||||.|||||||||.|||||||.|||||.|||||||||||||||||.||.|||||
Sbjct 3109 AGTGTCACTTACAGGACCAAATCTGGCAACATCTTGCTGCATAAGTCAACCATTAACAGGGAGGCTACCCGGTT 3182
Query 1128 ACGGAGCCGATGGCTGACGTATTTCATGGCAGTCAAGTCCAATGGCAGCGTCTTCGTCCGGGACTCCTCTCAGG 1201
||||||||||||||||||.|||||||||||.||||||||||||||.||||||||.||.||.||.|||||.||||
Sbjct 3183 ACGGAGCCGATGGCTGACATATTTCATGGCCGTCAAGTCCAATGGTAGCGTCTTTGTTCGAGATTCCTCCCAGG 3256
Query 1202 TGCACCCGCTAGCTGTGCTGCTGCTGACCGACGGGGACGTGCACATCCGTGATGACGGGCGCCGGGCCACCATC 1275
|||||||.|||||||||.||||.||.||.||.|||||||||||||||||.|||||.|||||.||||||||||||
Sbjct 3257 TGCACCCACTAGCTGTGTTGCTCCTAACAGATGGGGACGTGCACATCCGAGATGATGGGCGTCGGGCCACCATC 3330
Query 1276 TCACTGAGCGACAGTGACCTGCTGCGGCTGGAGGGTGACTCGCGTACCGTGTGGCTGCTGAAGGAGCTGCGGCG 1349
|||.||||.|||||.||||||||.||||||||.|||||.||.||.||.|||.||.||||.|.||||.|.||.||
Sbjct 3331 TCATTGAGTGACAGCGACCTGCTTCGGCTGGAAGGTGATTCACGAACTGTGCGGTTGCTAAGGGAGTTTCGTCG 3404
Query 1350 GGCCCTGGGCCGCATGGTGGAGCGGAGCCTGCGCAGCGAGCTGGCTGCACTTCCCCCCAGCGTACAGGAGGAGC 1423
.|||||.||.||.|||||||||||||||||.|||||||||.|.|||||||||||.|..||.||.|||.|.||.|
Sbjct 3405 AGCCCTAGGACGGATGGTGGAGCGGAGCCTCCGCAGCGAGTTAGCTGCACTTCCTCTTAGTGTGCAGCAAGAAC 3478
Query 1424 ACGGGCAGCTGCTTGCGCTACTGGCAGAGCTGCTGCGAGGACCCTGTGGCAGCTTTGATGTGCGCAAGACAGCT 1497
||||||||||||||||.||.|||||||||.||||.||||||||.|||||||||||||||.||||||||||||||
Sbjct 3479 ACGGGCAGCTGCTTGCACTGCTGGCAGAGTTGCTTCGAGGACCTTGTGGCAGCTTTGATATGCGCAAGACAGCT 3552
Query 1498 GACGAC 1503
||.|||
Sbjct 3553 GATGAC 3558
