Nucleotide Global Alignment
Description
- Query:
- TRCN0000466280
- Subject:
- XM_006527005.3
- Aligned Length:
- 2007
- Identities:
- 1184
- Gaps:
- 657
Alignment
Query 1 ATGGCCATTGTGCAGACTCTGCCAGTGCCACTGGAGCCTGCTCCTGAAGCTGCCACTGCCCCACAAGCTCCAGT 74
||||||||||||||.||||||||||||||.||||||||.||.|.|||..|.|||||||||||..||.||||||.
Sbjct 1 ATGGCCATTGTGCACACTCTGCCAGTGCCTCTGGAGCCCGCACGTGAGACAGCCACTGCCCCCAAAACTCCAGC 74
Query 75 CATGGGTAGTGTGAGCAGCCTTATCTCAGGCCGGCCCTGTCCCGGGGGGCCAGCTCCTCCCCGCCACCACGGCC 148
.|||||.||.||||||||.||||||||||||||||||||.||||||||.||.|||||||..||.||.||.||..
Sbjct 75 AATGGGCAGCGTGAGCAGTCTTATCTCAGGCCGGCCCTGCCCCGGGGGACCTGCTCCTCAACGACATCATGGTG 148
Query 149 CTCCTGGGCCCACCTTCTTCCGCCAGCAGGATGGCCTGCTACGGGGTGGCTATGAGGCACAGGAGCCGCTGTGC 222
..||||||||||||||||||||||||||||||||.|||||||.|||||||||.|||||||||||.|||||.|||
Sbjct 149 TCCCTGGGCCCACCTTCTTCCGCCAGCAGGATGGGCTGCTACCGGGTGGCTACGAGGCACAGGAACCGCTCTGC 222
Query 223 CCAGCTGTGCCCCCTAGGAAGGCTGTCCCTGTCACCAGCTTCACCTACATCAATGAGGACTTCCGGACAGAGTC 296
||.||||||||.||.||||||||||||||.|.||..|||||.|||||..|||||||||||||||||||||||||
Sbjct 223 CCGGCTGTGCCACCGAGGAAGGCTGTCCCAGGCAATAGCTTTACCTATGTCAATGAGGACTTCCGGACAGAGTC 296
Query 297 ACCCCCCAGCCCAAGCAGTGATGTTGAGGATGCCCGAGAGCAGCGGGCACACAATGCCCACCTCCGCGGCCCAC 370
.||.||||||||.||||||||||||||.|||.||||.||.||.|.|||||||||||||||||||||.||.||.|
Sbjct 297 TCCTCCCAGCCCCAGCAGTGATGTTGAAGATCCCCGGGAACATCAGGCACACAATGCCCACCTCCGTGGGCCCC 370
Query 371 CACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAGAACATGGAGAAGATCCTGATCCGCCCAACAGCCTTC 444
|||||||||||||||||||||||||||||||||||||| ||.|||
Sbjct 371 CACCAAAGCTCATCCCTGTCTCTGGAAAGCTGGAGAAG------------------------------GCATTC 414
Query 445 AAGCCAGTGCTGCCCAAACCTCGAGGGGCTCCGTCCCTGCCTAGCTTCATGGGTCCTCGGGCCACCGGGCTGTC 518
||||
Sbjct 415 ------------------------GGGG---------------------------------------------- 418
Query 519 TGGGAGCCAGGGCAGCCTGACGCAGCTGTTTGGGGGCCCTGCCTCCTCCTCCTCCTCTTCCTCCTCCTCTTCAG 592
||.|||||| |||.|||.|
Sbjct 419 -------CACGGCAGC------------------GGCGCTGGC------------------------------- 436
Query 593 CTGCTGACAAACCCCTGGCATTTAGTGGCTGGGCCAGTGGCTGCCCATCAGGGACGCTATCCGACTCTGGCCGA 666
Sbjct 437 -------------------------------------------------------------------------- 436
Query 667 AACTCACTGTCCAGCCTGCCCACCTACAGCACCGGAGGTGCCGAGCCAACCACCAGCTCCCCAGGCGGGCACCT 740
|||.|||
Sbjct 437 -----------------------------CACGGGA-------------------------------------- 443
Query 741 GCCTTCCCATGGCTCTGGGCGAGGGGCACTGCCTGGGCCAGCCCGAGGGGTCCCTACTGGGCCCTCCCACTCAG 814
||||||| ||||
Sbjct 444 ------------------GCGAGGG-------------------GAGG-------------------------- 454
Query 815 ACAGTGGCCGGTCCTCCTCCAGCAAGAGCACAGGCTCCCTAGGGGGCCGTTTGGCTGGGGGGCTTTTGGGCAGT 888
Sbjct 455 -------------------------------------------------------------------------- 454
Query 889 GGTACTCGGGCCTCCCCTGACAGCAGCTCCTGTGGGGAGCGCTCACCACCACCCCCGCCTCCACCTCCTTCGGA 962
Sbjct 455 -------------------------------------------------------------------------- 454
Query 963 TGAGGCCCTGCTGCACTGTGTCCTGGAAGGAAAGCTCCGAGACCGGGAGGCAGAGCTTCAGCAGCTGCGGGACA 1036
|||||| ||||
Sbjct 455 --------------ACTGTG--------------------------------------CAGC------------ 464
Query 1037 GTCTGGACGAGAATGAGGCTACCATGTGCCAGGCATACGAGGAGCGGCAGCGGCACTGGCAGCGAGAGCGTGAG 1110
|||||| ||||| ||
Sbjct 465 ----------------------------CCAGGC------------GCAGC---------------------AG 477
Query 1111 GCCCTGCGAGAGGACTGTGCGGCCCAGGCACAGCGGGCACAGCGGGCCCAACAGCTGCTGCAGCTGCAGGTGTT 1184
||| .|.|||||.|..|||||||||||||||||||||||||||||||||||
Sbjct 478 GCC------------------------ACGCAGCGCGTCCAGCGGGCCCAACAGCTGCTGCAGCTGCAGGTGTT 527
Query 1185 CCAGCTGCAGCAGGAGAAGCGGCAATTGCAGGATGACTTCGCACAGCTGCTGCAGGAGCGCGAACAGCTGGAGC 1258
||||||||||||.||||||||.||.||||||||||||||.||.||||||||.||||||||.|||||||||||||
Sbjct 528 CCAGCTGCAGCAAGAGAAGCGCCAGTTGCAGGATGACTTTGCCCAGCTGCTACAGGAGCGGGAACAGCTGGAGC 601
Query 1259 GGCGCTGCGCCACCTTGGAGCGGGAGCAGCGGGAGCTCGGGCCGAGGCTTGAGGAGACCAAGTGGGAGGTGTGC 1332
|.|||||.|||||.||.||.||||||||||||||.||||||||..||||.|||||||||||.|||||||||||.
Sbjct 602 GCCGCTGTGCCACTTTTGAACGGGAGCAGCGGGAACTCGGGCCACGGCTGGAGGAGACCAAATGGGAGGTGTGT 675
Query 1333 CAGAAATCAGGCGAGATCTCCCTGCTGAAGCAGCAGCTGAAAGAGTCTCAGGCAGAGCTGGTGCAGAAGGGCAG 1406
|||||||||||.|||||||||||||||||||||||.|||||.||.|||||||||||||||||.|||||||||||
Sbjct 676 CAGAAATCAGGTGAGATCTCCCTGCTGAAGCAGCAACTGAAGGAATCTCAGGCAGAGCTGGTCCAGAAGGGCAG 749
Query 1407 CGAGCTGGTGGCTCTGCGGGTGGCGCTGCGGGAGGCCCGTGCTACGCTGCGGGTCAGTGAGGGCCGTGCGCGGG 1480
.|||||||||||.|||||||||||.||.||.||||||||.||.||..||||||||||||||||||||||..|||
Sbjct 750 TGAGCTGGTGGCGCTGCGGGTGGCCCTCCGTGAGGCCCGGGCCACCTTGCGGGTCAGTGAGGGCCGTGCCAGGG 823
Query 1481 GTCTACAGGAGGCCGCCCGAGCTCGGGAGCTGGAGCTGGAAGCCTGTTCCCAGGAGCTGCAGCGACACCGCCAG 1554
|.||.||||||||.||||||||||||||||.|||||||||.|||||.||.||||||||.|||||..||||||||
Sbjct 824 GCCTGCAGGAGGCAGCCCGAGCTCGGGAGCAGGAGCTGGAGGCCTGCTCGCAGGAGCTTCAGCGGTACCGCCAG 897
Query 1555 GAAGCTGAGCAGCTGCGGGAGAAAGCTGGGCAGTTGGATGCTGAGGCGGCCGGACTCCGGGAGCCCCCTGTGCC 1628
||.|||||||.|||.||||||||.||.|||||.||||||||.||.||..|.|||||||||||.||||||||.||
Sbjct 898 GAGGCTGAGCGGCTCCGGGAGAAGGCCGGGCATTTGGATGCCGAAGCATCGGGACTCCGGGATCCCCCTGTACC 971
Query 1629 ACCTGCCACCGCTGACCCATTCCTCCTGGCGGAGAGTGATGAGGCCAAAGTGCAGCGGGCAGCAGCCGGGGTTG 1702
.|||||||||.|.|||||.|||||||||||.|||||||||||||||||.||||||||||||||.||.||||..|
Sbjct 972 CCCTGCCACCACCGACCCGTTCCTCCTGGCAGAGAGTGATGAGGCCAAGGTGCAGCGGGCAGCGGCTGGGGCAG 1045
Query 1703 GGGGCAGCTTGCGGGCCCAGGTGGAGCGATTGCGGGTGGAGCTGCAGCGGGAGCGGCGGCGGGGTGAGGAGCAG 1776
||||.|||.|||||||.||||||||.||..||||....||.|||||||||||||.||||||.||.||.|||||.
Sbjct 1046 GGGGTAGCCTGCGGGCTCAGGTGGAACGGCTGCGCCAAGAACTGCAGCGGGAGCAGCGGCGAGGGGACGAGCAA 1119
Query 1777 CGGGACAGCTTTGAGGGGGAGCGGCTGGCCTGGCAGGCAGAGAAGGAGCAGGTGATCCGCTACCAGAAGCAGCT 1850
|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1120 CGGGACAGCTTTGAGGGGGAGCGGCTGGCCTGGCAGGCAGAGAAGGAACAGGTGATCCGCTACCAGAAGCAGCT 1193
Query 1851 GCAGCACAACTACATCCAGATGTACCGGCGCAACCGGCAGCTAGAGCAGGAGCTGCAGCAGCTCAGCCTGGAGC 1924
||||||||||||.|||||||||||||||||.|||||||||||.||||||||.||||||||.||.||||||||||
Sbjct 1194 GCAGCACAACTATATCCAGATGTACCGGCGTAACCGGCAGCTGGAGCAGGAACTGCAGCAACTGAGCCTGGAGC 1267
Query 1925 TGGAGGCCCGGGAGCTCGCTGACCTGGGCCTGGCCGAGCAGGCCCCCTGCATCTGCCTGGAGGAGATCACTGCT 1998
||||||||||.|||||.||.||..||||||||||.|||..||||||.||||||||.|||||||||||||||||.
Sbjct 1268 TGGAGGCCCGCGAGCTTGCGGATTTGGGCCTGGCGGAGTCGGCCCCTTGCATCTGTCTGGAGGAGATCACTGCC 1341
Query 1999 ACTGAGATC 2007
|||||||||
Sbjct 1342 ACTGAGATC 1350