Nucleotide Global Alignment

Description

Query:
TRCN0000466442
Subject:
XM_011521095.1
Aligned Length:
4689
Identities:
833
Gaps:
3849

Alignment

Query    1  ATGGCGCCAGCGAAAGCCACGAACGTGGTGCGGCTGCTACTAGGCTCCACAGCGCTGTGGCTTTCGCAGCTCGG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGCCAGCGAAAGCCACGAACGTGGTGCGGCTGCTACTAGGCTCCACAGCGCTGTGGCTTTCGCAGCTCGG  74

Query   75  CTCCGGGACGGTCGCCGCGTCCAAGTCGGTGACTGCCCACTTGGCCGCGAAGTGGCCCGAGACCCCGCTGCTGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTCCGGGACGGTCGCCGCGTCCAAGTCGGTGACTGCCCACTTGGCCGCGAAGTGGCCCGAGACCCCGCTGCTGC  148

Query  149  TGGAGGCAAGTGAATTTATGGCAGAAGAAAGTAATGAAAAATTTTGGCAGTTTTTGGAAACTGTGCAAGAATTA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGAGGCAAGTGAATTTATGGCAGAAGAAAGTAATGAAAAATTTTGGCAGTTTTTGGAAACTGTGCAAGAATTA  222

Query  223  GCAATTTATAAGCAAACAGAATCAGATTATTCTTATTACAACTTAATCCTGAAGAAAGCTGGACAGTTTCTAGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCAATTTATAAGCAAACAGAATCAGATTATTCTTATTACAACTTAATCCTGAAGAAAGCTGGACAGTTTCTAGA  296

Query  297  CAATTTACACATCAACCTTTTAAAGTTTGCTTTCTCTATAAGGGCATACTCCCGAGCTATTCAGATGTTTCAGC  370
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct  297  CAATTTACACATCAACCTTTTAAAGTTTGCTTTCTCTATAAGGGCATACTCCCCAGCTATTCAGATGTTTCAGC  370

Query  371  AGATTGCAGCTGATGAGCCACCACCAGATGGTTGTAATGCATTTGTGGTTATTCATAAGAAGCACACCTGTAAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGATTGCAGCTGATGAGCCACCACCAGATGGTTGTAATGCATTTGTGGTTATTCATAAGAAGCACACCTGTAAA  444

Query  445  ATTAATGAGATTAAAAAGCTGCTGAAGAAAGCTGCTTCAAGGACTAGACCTTATCTATTTAAAGGAGATCACAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ATTAATGAGATTAAAAAGCTGCTGAAGAAAGCTGCTTCAAGGACTAGACCTTATCTATTTAAAGGAGATCACAA  518

Query  519  ATTTCCTACAAACAAAGAGAACTTACCAGTGGTGATTCTCTATGCCGAAATGGGTACTAGAACATTTAGTGCAT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ATTTCCTACAAACAAAGAGAACTTACCAGTGGTGATTCTCTATGCCGAAATGGGTACTAGAACATTTAGTGCAT  592

Query  593  TTCACAAAGTATTGTCTGAAAAAGCTCAAAATGAGGAAATTCTGTATGTTCTTCGCCATTATATTCAGAAACCA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTCACAAAGTATTGTCTGAAAAAGCTCAAAATGAGGAAATTCTGTATGTTCTTCGCCATTATATTCAGAAACCA  666

Query  667  AGCTCACGGAAAATGTACTTATCTGGGTATGGTGTGGAGCTAGCAATTAAGAGTACAGAATACAAAGCACTGGA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGCTCACGGAAAATGTACTTATCTGGGTATGGTGTGGAGCTAGCAATTAAGAGTACAGAATACAAAGCACTGGA  740

Query  741  TGATACCCAAGTTAAAACTGTGACTAATACTACTGTAGAGGATGAGACTGAAACAAATGAAGTTCAAGGATTTC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGATACCCAAGTTAAAACTGTGACTAATACTACTGTAGAGGATGAGACTGAAACAAATGAAGTTCAAGGATTTC  814

Query  815  TCTTTGGGAAACTAAAGCTTGTCTAT------------------------------------------------  840
            ||||||||||||||||.....|.|||                                                
Sbjct  815  TCTTTGGGAAACTAAAAGAAATATATTCAGATCTTAGAGATAATCTGACAGCATTCCAAAAATACCTGATTGAG  888

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct  889  AGTAACAAACAAATGATGCCTTTGAAAGTCTGGGAACTACAAGATCTTAGTTTTCAAGCAGCTTCTCAAATAAT  962

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct  963  GTCCGCTCCAGTTTATGATTCCATTAAATTAATGAAAGACATTTCACAGAACTTCCCCATAAAAGCCAGATCTC  1036

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1037  TAACCAGAATTGCTGTAAATCAACATATGAGAGAAGAAATAAAGGAAAATCAAAAGGATCTTCAAGTTAGATTT  1110

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1111  AAAATTCAGCCAGGCGATGCTCGTCTATTTATAAATGGCCTTCGTGTTGATATGGATGTTTATGACGCTTTTAG  1184

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1185  TATTTTGGATATGCTGAAATTAGAAGGAAAAATGATGAATGGCCTTCGCAATCTTGGGATCAATGGGGAAGATA  1258

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1259  TGAGCAAATTTTTAAAATTAAATTCACACATTTGGGAATATACTTATGTATTAGATATTCGACATTCTTCTATA  1332

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1333  ATGTGGATTAATGACTTAGAAAATGATGATTTGTATATTACATGGCCTACAAGTTGCCAGAAACTTCTGAAGCC  1406

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1407  AGTATTTCCTGGAAGTGTACCTTCCATAAGGCGCAATTTTCATAATTTGGTTCTGTTTATTGATCCGGCCCAAG  1480

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1481  AATATACCTTGGATTTTATAAAACTTGCTGATGTTTTCTATTCTCACGAAGTTCCTCTTAGAATTGGTTTTGTG  1554

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1555  TTCATTCTTAATACAGATGATGAAGTTGATGGAGCAAATGATGCTGGAGTTGCTCTCTGGCGAGCTTTCAACTA  1628

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1629  TATTGCAGAAGAATTTGATATATCAGAAGCATTTATTTCTATAGTACACATGTACCAAAAAGTGAAGAAGGATC  1702

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1703  AAAATATACTCACTGTGGACAATGTGAAGAGTGTTCTCCAAAATACATTTCCTCATGCTAATATTTGGGATATT  1776

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1777  TTGGGAATTCATTCTAAATATGATGAAGAAAGAAAGGCTGGAGCAAGCTTTTATAAGATGACTGGCCTGGGTCC  1850

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1851  TTTGCCTCAAGCTCTTTATAATGGTGAACCCTTTAAACATGAAGAGATGAATATTAAAGAACTAAAAATGGCTG  1924

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1925  TTCTTCAAAGAATGATGGATGCATCTGTATATTTACAAAGAGAAGTTTTTTTGGGCACATTAAATGATCGCACG  1998

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1999  AATGCAATTGATTTTCTAATGGATAGGAATAATGTTGTACCCCGTATAAATACTTTGATTTTGCGTACTAACCA  2072

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2073  GCAGTACCTCAATTTAATATCTACATCAGTAACTGCTGATGTTGAAGATTTCTCTACTTTCTTTTTCTTGGATT  2146

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2147  CACAAGATAAGAGTGCTGTAATTGCAAAGAACATGTATTATTTAACCCAAGACGATGAGAGTATAATTTCTGCA  2220

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2221  GTCACTCTCTGGATTATTGCAGATTTTGATAAGCCTTCTGGGAGAAAACTTCTTTTTAATGCATTAAAGCACAT  2294

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2295  GAAAACAAGTGTTCATAGTCGGTTGGGGATTATTTATAATCCTACATCAAAAATAAATGAAGAGAACACAGCTA  2368

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2369  TTTCTAGAGGAATTTTGGCAGCTTTTCTTACACAGAAGAACATGTTTTTGAGAAGCTTTCTTGGGCAACTGGCA  2442

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2443  AAGGAAGAAATTGCTACAGCTATTTACTCTGGAGATAAAATTAAAACATTCCTTATTGAGGGGATGGATAAGAA  2516

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2517  TGCTTTTGAGAAAAAATATAATACTGTTGGAGTGAATATTTTTCGAACTCACCAGTTGTTCTGTCAAGATGTAC  2590

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2591  TTAAATTACGTCCTGGAGAAATGGGTATTGTCAGCAATGGGAGATTCTTAGGACCTTTAGATGAAGATTTTTAT  2664

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2665  GCAGAAGATTTTTACTTGTTGGAAAAGATAACATTTAGTAATTTAGGAGAGAAAATTAAAGGCATTGTTGAAAA  2738

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2739  TATGGGAATCAACGCAAATAACATGAGTGACTTTATTATGAAAGTTGATGCCCTTATGTCCTCTGTGCCTAAGC  2812

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2813  GTGCATCTCGATATGATGTCACATTTCTTAGGGAGAATCACAGTGTTATAAAGACGAATCCTCAAGAGAATGAT  2886

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2887  ATGTTCTTCAATGTCATTGCTATTGTTGATCCATTAACAAGAGAAGCACAGAAAATGGCACAGTTGTTGGTTGT  2960

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2961  ACTTGGCAAGATTATCAACATGAAGATAAAGTTGTTCATGAACTGTAGGGGCAGGCTTTCAGAAGCCCCTTTAG  3034

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 3035  AAAGCTTTTACCGTTTTGTTCTGGAACCAGAACTGATGTCAGGGGCTAATGACGTTTCTTCTCTTGGACCAGTG  3108

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 3109  GCAAAATTTTTGGATATTCCTGAATCACCCCTCCTAATCCTCAACATGATTACTCCAGAAGGCTGGTTGGTTGA  3182

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 3183  AACAGTGCACAGCAACTGTGACCTTGATAATATTCACTTAAAGGATACTGAGAAAACTGTTACAGCAGAATATG  3256

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 3257  AACTAGAATACTTACTACTGGAAGGACAATGCTTTGATAAAGTGACAGAACAGCCTCCTCGGGGTCTGCAGTTC  3330

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 3331  ACACTAGGCACAAAAAATAAACCTGCTGTGGTTGATACAATAGTGATGGCACATCATGGGTATTTTCAATTAAA  3404

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 3405  AGCAAACCCAGGTGCTTGGATACTGAGGTTACACCAAGGAAAATCTGAAGATATTTATCAAATAGTTGGGCATG  3478

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 3479  AAGGAACTGACTCTCAAGCAGACCTAGAAGATATCATTGTTGTATTAAACAGCTTCAAAAGCAAGATACTCAAA  3552

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 3553  GTAAAAGTGAAAAAAGAAACAGACAAAATTAAGGAAGATATCCTTACCGATGAAGATGAAAAAACAAAAGGACT  3626

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 3627  GTGGGATTCCATTAAAAGTTTCACAGTAAGCTTGCATAAAGAAAACAAAAAGGAAAAAGATGTCCTAAACATTT  3700

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 3701  TTTCAGTTGCTTCTGGTCATTTATATGAACGTTTTTTAAGAATTATGATGCTTTCTGTTTTGCGTAACACCAAA  3774

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 3775  ACACCAGTGAAATTCTGGTTGCTAAAAAATTATCTCTCACCGACATTTAAAGAAGTAATTCCTCACATGGCTAA  3848

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 3849  AGAGTATGGATTCCGATATGAACTAGTTCAATATAGGTGGCCCCGTTGGCTTCGTCAACAGACTGAAAGACAGA  3922

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 3923  GGATTATTTGGGGTTACAAAATTCTTTTCCTTGATGTTCTTTTCCCACTAGCAGTGGACAAAATCATTTTTGTT  3996

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 3997  GATGCTGACCAGATTGTGAGACATGATCTAAAAGAACTTCGAGATTTCGATCTGGATGGAGCTCCTTATGGGTA  4070

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 4071  TACTCCATTTTGTGATAGCCGCAGGGAAATGGATGGATATCGTTTCTGGAAAACAGGATACTGGGCATCACATC  4144

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 4145  TTTTAAGACGGAAATACCATATCAGTGCTTTATATGTAGTGGATCTCAAGAAGTTCAGGAGAATTGGAGCAGGT  4218

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 4219  GACAGGCTCAGGAGCCAGTATCAAGCTCTCAGTCAAGATCCAAACAGTCTTTCAAACCTAGATCAGGATCTCCC  4292

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 4293  CAATAATATGATTTACCAAGTCGCCATTAAGTCTCTTCCTCAAGACTGGCTGTGGTGTGAAACCTGGTGTGATG  4366

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 4367  ATGAATCCAAACAAAGAGCCAAAACAATTGATCTGTGCAATAATCCCAAAACAAAAGAATCCAAACTAAAAGCT  4440

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 4441  GCTGCCAGAATTGTCCCAGAATGGGTGGAGTATGATGCTGAGATAAGACAACTATTAGATCATCTTGAAAACAA  4514

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 4515  GAAGCAAGATACAAGCTCTACAAGAAGCATGGCAGCATCTGCTTCTGGGGAAGCCTCAAGGAGCTTTTATTCAT  4588

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 4589  GGTGGAAGGCAAAGCAGGAGCAGGTGTCTTACATTGGAGGAACAGGACCACGAGAGAGAAGGGGAAGGTGCCAC  4662

Query  841  ---------------------------  840
                                       
Sbjct 4663  ACACTTTTAAACAACCAGATCTCACAC  4689

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