Nucleotide Global Alignment

Description

Query:
TRCN0000466494
Subject:
NM_001122896.2
Aligned Length:
1686
Identities:
233
Gaps:
1425

Alignment

Query    1  ATGGCGACTGATACGTCTCAAGGTGAACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGAT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCACGCGGACAAGTTAGGTGAGAAGGTAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGG  148
                                                    |||||.||.||||||.|.||||||||||||||||
Sbjct    1  ----------------------------------------ATGCCTATACGTCGAGCCGTGAATTCTACCCGGG  34

Query  149  AAACTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCT  222
            |||||||.|||||||||||.|||||||||||||||||||||||.|||||||||||...||||||||||||||||
Sbjct   35  AAACTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACCAGAACCAGATGGAAGTTCAGAGGAATCT  108

Query  223  GTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGA  296
            .||||.||||||||||||||.||||||||.||||||||||||||.||.|||||||||||||||||.||||||||
Sbjct  109  ATCTCTACTGTAGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGGGA  182

Query  297  ACCTGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCAAAAAGGA-GAGAGCTGATAGT  363
            .|||||||.||.|||||||||||      |.||.||||||.||||||||.|||||||||| ||||      ||.
Sbjct  183  GCCTGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCAAAAAGGATGAGA------AGG  250

Query  364  ATTCATTCCACTCTTTTCATAATTGGTCAGAACAGT--------------------------------------  399
            | |||.||           |||      ||||.||.                                      
Sbjct  251  A-TCAGTC-----------TAA------AGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACT  306

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  307  CTCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGC  380

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  381  AATCTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCA  454

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  455  TTCATAAGTACCCGTCTCTGGGTCTGGAGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAAC  528

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  529  AGAGGAGTCATCAGACAGGTAAAAGGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATCAAAACCACC  602

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  603  TCAGAAATCCAAAAACAGAAAGAAGGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTCTCC  676

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  677  CGTTGGCTTTTACTCGGCTCTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAGTAT  750

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  751  TACCCTAAGCTCAGAGTGGACATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCA  824

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  825  GCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGCTGG  898

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  899  GTGGAAGCCTGATGGAATATGCAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACCACT  972

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  973  GCTCTGAAGAAGTATGTCCTGGAGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTGAAAAAAAC  1046

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1047  CCTGCAGAAATGTGAGAAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGCTGT  1120

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1121  CCTTCCCCTACTACCCTAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATGAAGATGAA  1194

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1195  GATGACGATGACGATGAATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAA  1268

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1269  AACACCAGCCAAGTCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGG  1342

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1343  CTGCCCAGAGAGGGAAAGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCAGGAAAGCC  1416

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1417  AGACCCTCTCCCTCAGTCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGA  1490

Query  400  ----------------------------------------------------------  399
                                                                      
Sbjct 1491  AGCGAAACTGCCCGGGAAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG  1548