Nucleotide Global Alignment
Description
- Query:
- TRCN0000467037
- Subject:
- XR_001740233.2
- Aligned Length:
- 2304
- Identities:
- 1176
- Gaps:
- 1128
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAAGTAGAAGGCGGTGGCTGAGGCGGTTCCGGAGGTTCTAGTGTCGGAGTTGGGTGCAGGCAGGTGCCATGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGCTTGAGGCACACTGAGGGGACGCGGGGCTGGGCCATGGCCGGCGCTCGGGCCGCCGCCGCCGCTGCCTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGGGTCCTCGGCCTCTTCAGGCAACCAGCCGCCTCAGGAGCTGGGGCTTGGGGAGCTGCTGGAGGAGTTCTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGACTCAGTACCGGGCCAAGGATGGCAGCGGGACCGGCGGCTCTAAGGTTGAGCGCATTGAGAAGAGATGTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAGCTGTTTGGCCGAGACTACTGTTTCAGCGTGATTCCAAACACGAATGGGGATATCTGTGGCCACTATCCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGCACATCGTGTTCCTGGAGTATGAGAGTTCTGAGAAGGAGAAAGACACGTTTGAGAGTACCGTACAGGTGAGC 444
Query 1 ------------------------------ATGGCCCGGTGCAGAGGACGGTTTGTCTGCCCAGTAATCCTGTT 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAGTTGCAAGACCTCATCCACCGCAGCAAGATGGCCCGGTGCAGAGGACGGTTTGTCTGCCCAGTAATCCTGTT 518
Query 45 CAAGGGCAAGCACATTTGCAGGTCGGCCACACTGGCTGGATGGGGAGAGCTGTATGGACGCTCAGGCTACAACT 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAAGGGCAAGCACATTTGCAGGTCGGCCACACTGGCTGGATGGGGAGAGCTGTATGGACGCTCAGGCTACAACT 592
Query 119 ATTTTTTCTCAGGGGGTGCAGATGATGCCTGGGCAGATGTGGAGGACGTCACGGAGGAGGACTGTGCTCTTCGA 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATTTTTTCTCAGGGGGTGCAGATGATGCCTGGGCAGATGTGGAGGACGTCACGGAGGAGGACTGTGCTCTTCGA 666
Query 193 AGTGGTGACACGCATCTTTTTGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACCTGTCAGTCAAATA 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGTGGTGACACGCATCTTTTTGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACCTGTCAGTCAAATA 740
Query 267 CATCTGTGACCTGATGGTGGAGAACAAGAAGGTGAAGTTTGGCATGAATGTAACCTCCTCTGAGAAGGTGGACA 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CATCTGTGACCTGATGGTGGAGAACAAGAAGGTGAAGTTTGGCATGAATGTAACCTCCTCTGAGAAGGTGGACA 814
Query 341 AAGCCCAGCGCTATGCCGACTTCACTCTCCTCTCCATCCCGTATCCAGGCTGTGAATTTTTCAAGGAATATAAA 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAGCCCAGCGCTATGCCGACTTCACTCTCCTCTCCATCCCGTATCCAGGCTGTGAATTTTTCAAGGAATATAAA 888
Query 415 GATCGGGATTACATGGCAGAAGGGCTCATATTTAACTGGAAGCAGGACTACGTTGATGCCCCATTGAGCATCCC 488
||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GATCGGGATTACATGGCAGAAGGGCTCATATTTAACTGGAAG-------------------------------- 930
Query 489 CGACTTCCTGACTCACTCTCTGAACATTGACTGGAGCCAGTATCAGTGTTGGGATCTGGTGCAACAAACACAAA 562
|||||||||||||||||||||||||||||||
Sbjct 931 -------------------------------------------CAGTGTTGGGATCTGGTGCAACAAACACAAA 961
Query 563 ACTACCTGAAGCTGCTGCTTTCCTTAGTTAACAGTGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGC 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 ACTACCTGAAGCTGCTGCTTTCCTTAGTTAACAGTGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGC 1035
Query 637 TGGGATCGGACCCCCCTCTTCATCTCCCTCCTGCGCCTTTCCTTGTGGGCTGATGGGCTCATCCACACGTCCCT 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 TGGGATCGGACCCCCCTCTTCATCTCCCTCCTGCGCCTTTCCTTGTGGGCTGATGGGCTCATCCACACGTCCCT 1109
Query 711 GAAGCCCACTGAGATCCTCTACCTCACTGTGGCCTATGACTGGTTCCTCTTCGGGCACATGTTGGTAGATCGGC 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 GAAGCCCACTGAGATCCTCTACCTCACTGTGGCCTATGACTGGTTCCTCTTCGGGCACATGTTGGTAGATCGGC 1183
Query 785 TCAGCAAAGGGGAGGAGATTTTCTTCTTCTGCTTCAATTTTTTGAAGCATATTACCTCCGAGGAGTTCTCTGCT 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 TCAGCAAAGGGGAGGAGATTTTCTTCTTCTGCTTCAATTTTTTGAAGCATATTACCTCCGAGGAGTTCTCTGCT 1257
Query 859 CTGAAGACCCAGAGGAGGAAGAGTTTGCCAGCCCGGGATGGAGGCTTCACCCTGGAAGACATCTGCATGCTGAG 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 CTGAAGACCCAGAGGAGGAAGAGTTTGCCAGCCCGGGATGGAGGCTTCACCCTGGAAGACATCTGCATGCTGAG 1331
Query 933 ACGAAAGGACCGTGGCAGCACCACCAGCCTTGGCAGCGACTTCTCCCTGGTCATGGAGAGTTCCCCAGGAGCCA 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332 ACGAAAGGACCGTGGCAGCACCACCAGCCTTGGCAGCGACTTCTCCCTGGTCATGGAGAGTTCCCCAGGAGCCA 1405
Query 1007 CTGGGAGCTTCACCTATGAGGCCGTGGAGCTGGTCCCAGCAGGAGCGCCAACTCAGGCAGCTTG---------- 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1406 CTGGGAGCTTCACCTATGAGGCCGTGGAGCTGGTCCCAGCAGGAGCGCCAACTCAGGCAGCTTGATCAGTGGAC 1479
Query 1071 -------------------------------------------------------------------------- 1070
Sbjct 1480 CATCCCCTGCCCGGATCCTCTCTCTCCACAGACTATGGCAGCTGGCAGATGGTAACGGGCTGTGGCAGTATTCA 1553
Query 1071 ------------------------------------------------------------------------GC 1072
||
Sbjct 1554 GGAGCGGGCTGTCCTGCACACAGACTCCTCTCTCCCTTTCAGCTTCCCGGATGAGCTCCCTAACAGTTGTCTGC 1627
Query 1073 TTGCAGCCCTGAGTGATCGAGAGACTCGGCTGCAGGAGGTGCGCTCAGCCTTCTTGGCTGCGTACAGCAGCACA 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 TTGCAGCCCTGAGTGATCGAGAGACTCGGCTGCAGGAGGTGCGCTCAGCCTTCTTGGCTGCGTACAGCAGCACA 1701
Query 1147 GTGGGGCTTCGGGCAGTAGCCCCCAGTCCTTCCGGTGCCATCGGGGGCCTGCTGGAGCAATTTGCCCGTGGTGT 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702 GTGGGGCTTCGGGCAGTAGCCCCCAGTCCTTCCGGTGCCATCGGGGGCCTGCTGGAGCAATTTGCCCGTGGTGT 1775
Query 1221 TGGACTCCGGAGCATCAGCAGCAATGCCTTG------------------------------------------- 1251
|||||||||||||||||||||||||||||||
Sbjct 1776 TGGACTCCGGAGCATCAGCAGCAATGCCTTGTGAAGAAGCCAGCCCATGACATTTTCCTGCTCCTCTCTCAGCT 1849
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 1850 GAGCCCTTAGCAGAGAATCAAAGCCATGCCTGGCCGAAGGGGTACTTCCAGGTCAGGGGAAATTTCAGTCCCCC 1923
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 1924 ATCTCCATCATGAACATGGCAGCCCCAAAGCTGAGCAAGGCCAAAGACAGGGTTTTCCAACCCCCAGCCTCTTG 1997
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 1998 ACTGGTGACCACCACCCCTTCTTGTCACTGTCTCCCACCCACCCCATCTTTGCTGGGATTCCCATCAACTCTCA 2071
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 2072 GAACTGTGTGGGGTTTCCCTGGGGCCTTGTGGAAGCCATGACTTCACAAAGACCCTACCTGTCAGTTCTTGTTT 2145
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 2146 CTGGGGAGGAGGGATCACCTGCACTGAGAATGAGGCAGTTTGACACAGATCACAAAATAAAATCAAAGTCTTTT 2219
Query 1252 ---------- 1251
Sbjct 2220 TGAATAGCCA 2229
