Nucleotide Global Alignment

Description

Query:
TRCN0000467037
Subject:
XR_001740233.2
Aligned Length:
2304
Identities:
1176
Gaps:
1128

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAAGTAGAAGGCGGTGGCTGAGGCGGTTCCGGAGGTTCTAGTGTCGGAGTTGGGTGCAGGCAGGTGCCATGGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCGCTTGAGGCACACTGAGGGGACGCGGGGCTGGGCCATGGCCGGCGCTCGGGCCGCCGCCGCCGCTGCCTCGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGGGGTCCTCGGCCTCTTCAGGCAACCAGCCGCCTCAGGAGCTGGGGCTTGGGGAGCTGCTGGAGGAGTTCTCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGGACTCAGTACCGGGCCAAGGATGGCAGCGGGACCGGCGGCTCTAAGGTTGAGCGCATTGAGAAGAGATGTCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGAGCTGTTTGGCCGAGACTACTGTTTCAGCGTGATTCCAAACACGAATGGGGATATCTGTGGCCACTATCCCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGCACATCGTGTTCCTGGAGTATGAGAGTTCTGAGAAGGAGAAAGACACGTTTGAGAGTACCGTACAGGTGAGC  444

Query    1  ------------------------------ATGGCCCGGTGCAGAGGACGGTTTGTCTGCCCAGTAATCCTGTT  44
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAGTTGCAAGACCTCATCCACCGCAGCAAGATGGCCCGGTGCAGAGGACGGTTTGTCTGCCCAGTAATCCTGTT  518

Query   45  CAAGGGCAAGCACATTTGCAGGTCGGCCACACTGGCTGGATGGGGAGAGCTGTATGGACGCTCAGGCTACAACT  118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CAAGGGCAAGCACATTTGCAGGTCGGCCACACTGGCTGGATGGGGAGAGCTGTATGGACGCTCAGGCTACAACT  592

Query  119  ATTTTTTCTCAGGGGGTGCAGATGATGCCTGGGCAGATGTGGAGGACGTCACGGAGGAGGACTGTGCTCTTCGA  192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ATTTTTTCTCAGGGGGTGCAGATGATGCCTGGGCAGATGTGGAGGACGTCACGGAGGAGGACTGTGCTCTTCGA  666

Query  193  AGTGGTGACACGCATCTTTTTGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACCTGTCAGTCAAATA  266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGTGGTGACACGCATCTTTTTGATAAGGTCAGAGGCTATGACATCAAGCTGCTTCGATACCTGTCAGTCAAATA  740

Query  267  CATCTGTGACCTGATGGTGGAGAACAAGAAGGTGAAGTTTGGCATGAATGTAACCTCCTCTGAGAAGGTGGACA  340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CATCTGTGACCTGATGGTGGAGAACAAGAAGGTGAAGTTTGGCATGAATGTAACCTCCTCTGAGAAGGTGGACA  814

Query  341  AAGCCCAGCGCTATGCCGACTTCACTCTCCTCTCCATCCCGTATCCAGGCTGTGAATTTTTCAAGGAATATAAA  414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AAGCCCAGCGCTATGCCGACTTCACTCTCCTCTCCATCCCGTATCCAGGCTGTGAATTTTTCAAGGAATATAAA  888

Query  415  GATCGGGATTACATGGCAGAAGGGCTCATATTTAACTGGAAGCAGGACTACGTTGATGCCCCATTGAGCATCCC  488
            ||||||||||||||||||||||||||||||||||||||||||                                
Sbjct  889  GATCGGGATTACATGGCAGAAGGGCTCATATTTAACTGGAAG--------------------------------  930

Query  489  CGACTTCCTGACTCACTCTCTGAACATTGACTGGAGCCAGTATCAGTGTTGGGATCTGGTGCAACAAACACAAA  562
                                                       |||||||||||||||||||||||||||||||
Sbjct  931  -------------------------------------------CAGTGTTGGGATCTGGTGCAACAAACACAAA  961

Query  563  ACTACCTGAAGCTGCTGCTTTCCTTAGTTAACAGTGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGC  636
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  962  ACTACCTGAAGCTGCTGCTTTCCTTAGTTAACAGTGATGATGACAGCGGGCTGCTGGTACACTGTATCTCAGGC  1035

Query  637  TGGGATCGGACCCCCCTCTTCATCTCCCTCCTGCGCCTTTCCTTGTGGGCTGATGGGCTCATCCACACGTCCCT  710
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036  TGGGATCGGACCCCCCTCTTCATCTCCCTCCTGCGCCTTTCCTTGTGGGCTGATGGGCTCATCCACACGTCCCT  1109

Query  711  GAAGCCCACTGAGATCCTCTACCTCACTGTGGCCTATGACTGGTTCCTCTTCGGGCACATGTTGGTAGATCGGC  784
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110  GAAGCCCACTGAGATCCTCTACCTCACTGTGGCCTATGACTGGTTCCTCTTCGGGCACATGTTGGTAGATCGGC  1183

Query  785  TCAGCAAAGGGGAGGAGATTTTCTTCTTCTGCTTCAATTTTTTGAAGCATATTACCTCCGAGGAGTTCTCTGCT  858
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184  TCAGCAAAGGGGAGGAGATTTTCTTCTTCTGCTTCAATTTTTTGAAGCATATTACCTCCGAGGAGTTCTCTGCT  1257

Query  859  CTGAAGACCCAGAGGAGGAAGAGTTTGCCAGCCCGGGATGGAGGCTTCACCCTGGAAGACATCTGCATGCTGAG  932
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258  CTGAAGACCCAGAGGAGGAAGAGTTTGCCAGCCCGGGATGGAGGCTTCACCCTGGAAGACATCTGCATGCTGAG  1331

Query  933  ACGAAAGGACCGTGGCAGCACCACCAGCCTTGGCAGCGACTTCTCCCTGGTCATGGAGAGTTCCCCAGGAGCCA  1006
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1332  ACGAAAGGACCGTGGCAGCACCACCAGCCTTGGCAGCGACTTCTCCCTGGTCATGGAGAGTTCCCCAGGAGCCA  1405

Query 1007  CTGGGAGCTTCACCTATGAGGCCGTGGAGCTGGTCCCAGCAGGAGCGCCAACTCAGGCAGCTTG----------  1070
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct 1406  CTGGGAGCTTCACCTATGAGGCCGTGGAGCTGGTCCCAGCAGGAGCGCCAACTCAGGCAGCTTGATCAGTGGAC  1479

Query 1071  --------------------------------------------------------------------------  1070
                                                                                      
Sbjct 1480  CATCCCCTGCCCGGATCCTCTCTCTCCACAGACTATGGCAGCTGGCAGATGGTAACGGGCTGTGGCAGTATTCA  1553

Query 1071  ------------------------------------------------------------------------GC  1072
                                                                                    ||
Sbjct 1554  GGAGCGGGCTGTCCTGCACACAGACTCCTCTCTCCCTTTCAGCTTCCCGGATGAGCTCCCTAACAGTTGTCTGC  1627

Query 1073  TTGCAGCCCTGAGTGATCGAGAGACTCGGCTGCAGGAGGTGCGCTCAGCCTTCTTGGCTGCGTACAGCAGCACA  1146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628  TTGCAGCCCTGAGTGATCGAGAGACTCGGCTGCAGGAGGTGCGCTCAGCCTTCTTGGCTGCGTACAGCAGCACA  1701

Query 1147  GTGGGGCTTCGGGCAGTAGCCCCCAGTCCTTCCGGTGCCATCGGGGGCCTGCTGGAGCAATTTGCCCGTGGTGT  1220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702  GTGGGGCTTCGGGCAGTAGCCCCCAGTCCTTCCGGTGCCATCGGGGGCCTGCTGGAGCAATTTGCCCGTGGTGT  1775

Query 1221  TGGACTCCGGAGCATCAGCAGCAATGCCTTG-------------------------------------------  1251
            |||||||||||||||||||||||||||||||                                           
Sbjct 1776  TGGACTCCGGAGCATCAGCAGCAATGCCTTGTGAAGAAGCCAGCCCATGACATTTTCCTGCTCCTCTCTCAGCT  1849

Query 1252  --------------------------------------------------------------------------  1251
                                                                                      
Sbjct 1850  GAGCCCTTAGCAGAGAATCAAAGCCATGCCTGGCCGAAGGGGTACTTCCAGGTCAGGGGAAATTTCAGTCCCCC  1923

Query 1252  --------------------------------------------------------------------------  1251
                                                                                      
Sbjct 1924  ATCTCCATCATGAACATGGCAGCCCCAAAGCTGAGCAAGGCCAAAGACAGGGTTTTCCAACCCCCAGCCTCTTG  1997

Query 1252  --------------------------------------------------------------------------  1251
                                                                                      
Sbjct 1998  ACTGGTGACCACCACCCCTTCTTGTCACTGTCTCCCACCCACCCCATCTTTGCTGGGATTCCCATCAACTCTCA  2071

Query 1252  --------------------------------------------------------------------------  1251
                                                                                      
Sbjct 2072  GAACTGTGTGGGGTTTCCCTGGGGCCTTGTGGAAGCCATGACTTCACAAAGACCCTACCTGTCAGTTCTTGTTT  2145

Query 1252  --------------------------------------------------------------------------  1251
                                                                                      
Sbjct 2146  CTGGGGAGGAGGGATCACCTGCACTGAGAATGAGGCAGTTTGACACAGATCACAAAATAAAATCAAAGTCTTTT  2219

Query 1252  ----------  1251
                      
Sbjct 2220  TGAATAGCCA  2229

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