Nucleotide Global Alignment

Description

Query:
TRCN0000467045
Subject:
NM_001305019.1
Aligned Length:
1259
Identities:
871
Gaps:
304

Alignment

Query    1  ---------------------------------ATGGCGCCGCCTCTGGCCCCGCTCCCTCCCCGGGACCCAAA  41
                                             |||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGACCGATCCGTCGCTGGGGCTGACAGTCCCCATGGCGCCGCCTCTGGCCCCGCTCCCTCCCCGGGACCCAAA  74

Query   42  CGGGGCCGGACCCGAGTGGAGGGAGCCGGGGGCTGTGAGCTTCGCGGACGTGGCCGTGTACTTCTGCCGGGAGG  115
            ||||||.|||.||||||||||..||||.|||||.|||||||||||.|||||||||||||||||||.||||||||
Sbjct   75  CGGGGCGGGATCCGAGTGGAGAAAGCCCGGGGCCGTGAGCTTCGCCGACGTGGCCGTGTACTTCTCCCGGGAGG  148

Query  116  AGTGGGGCTGCTTGCGGCCAGCGCAGAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTACGGCCACCTGAGC  189
            |||||||||||.|||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  149  AGTGGGGCTGCCTGCGGCCCGCGCAGAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTACGGCCACCTGGGC  222

Query  190  GCTCTCGGAATCGGAGGCAACAAGCCAGCTCTCATCTCCTGGGTGGAGGAGGAGGCCGAACTGTGGGGTCCGGC  263
            ||.||||||.|||||||||.||||||.||.|||||||||||||||||||||.|||||||||||||||.||||||
Sbjct  223  GCGCTCGGAGTCGGAGGCAGCAAGCCGGCGCTCATCTCCTGGGTGGAGGAGAAGGCCGAACTGTGGGATCCGGC  296

Query  264  TGCCCAGGATCCGGAGGTGGCGAAATGTCAGACACAAACGGACCCAGCAGATTCCAGAAACAAGAAAAAGGAAA  337
            ||||||||||||||||||||||||.||||.||||.||.||||||   |||||||||||||||||.||.||||||
Sbjct  297  TGCCCAGGATCCGGAGGTGGCGAAGTGTCCGACAGAAGCGGACC---CAGATTCCAGAAACAAGGAAGAGGAAA  367

Query  338  GACAAAGGGAAGGGACGGGAGCCCTGGAGAAGCCCGACCCTGTGGCCGCCGGGTCTCCTGGGCTGAAGTCTCCC  411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct  368  GACAAAGGGAAGGGACGGGAGCCCTGGAGAAGCCCGACCCTGTGGCCGCCGGGTCTCCTGGGCTGAAGGCTCCC  441

Query  412  CAAGCCCCCTCGGCCGGGCCCCCTTATGGTTGGGAGCAGCTGTCCAAGGCACCGCACCGGGGACGCCCCTCCCT  485
            ||||||||||..||||||            |.||||||||||||||||||.|.||.||||.|.||||||..|.|
Sbjct  442  CAAGCCCCCTTTGCCGGG------------TTGGAGCAGCTGTCCAAGGCCCGGCGCCGGAGTCGCCCCCGCTT  503

Query  486  CTGTGCCCACCCCCCTGTCCCCCGAGCTGACCAGCGTCATGGCTGCTACGTGTGCGGGAAGAGCTTTGCCTGGC  559
            .|.||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||||
Sbjct  504  TTTTGCCCACCCCCCTGTCCCCCGAGCTGACCAGCGTCACGGCTGCTACGTGTGCGGGAAGAGCTTCGCCTGGC  577

Query  560  GCTCCACACTGGTGGAGCACGTCTACAGTCACACTGGCGAGAAGCCCTTCCACTGCACTGACTGCGGCAAGGGC  633
            ||||||||||||||||||||.|.|||||.||||..|||||||||||||||||||||.|.|||||||||||||||
Sbjct  578  GCTCCACACTGGTGGAGCACATTTACAGCCACAGGGGCGAGAAGCCCTTCCACTGCGCAGACTGCGGCAAGGGC  651

Query  634  TTCGGCCACGCTTCCTCCCTGAGCAAACACCGGGCCATCCATCGTGGGGAGCGGCCCCACCGCTGTCTGGAGTG  707
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|||||
Sbjct  652  TTCGGCCACGCTTCCTCCCTGAGCAAACACCGGGCCATCCATCGTGGGGAGCGGCCCCACCGCTGTCCCGAGTG  725

Query  708  TGGCCGGGCCTTCACGCAGCGCTCGGCGCTGACTTCGCACCTGCGCGTCCACACCGGCGAGAAACCCTATGGCT  781
            |||.||||||||||.||..|||.|||||||||||||.|||||||||||.|||||                    
Sbjct  726  TGGTCGGGCCTTCATGCGCCGCACGGCGCTGACTTCTCACCTGCGCGTTCACAC--------------------  779

Query  782  GCGCCGACTGTGGCCGCCGCTTCAGCCAGAGCTCTGCCCTCTACCAGCACCGGCGCGTGCACAGCGGCGAGACC  855
                                                                                      
Sbjct  780  --------------------------------------------------------------------------  779

Query  856  CCCTTCCCCTGCCCGGACTGTGGCCGCGCCTTCGCCTACCCCTCGGACCTGCGGCGCCACGTGCGCACCCACAC  929
                                                                                      
Sbjct  780  --------------------------------------------------------------------------  779

Query  930  CGGCGAGAAGCCCTACCCGTGCCCGGACTGCGGGCGCTGCTTCCGCCAGAGCTCGGAGATGGCAGTCCACAGGC  1003
                                                                                      
Sbjct  780  --------------------------------------------------------------------------  779

Query 1004  GCACCCACAGCGGCGAGAAGCCCTACCCCTGCCCGCAGTGCGGCCGCCGCTTTGGCCAGAAGTCAGCCGTGGCC  1077
                      .||||||||||||||||.||||||||||||.||||||.||||.||||.||||.|.|.|.|||||
Sbjct  780  ----------TGGCGAGAAGCCCTACCGCTGCCCGCAGTGTGGCCGCTGCTTCGGCCTGAAGACCGGCATGGCC  843

Query 1078  AAACACCAGTGGGTTCATCGGCCCGGGGCCGGGGGCCACAGGGGCCGGGTCGCC--GGGCGTCTGTCTGTGACC  1149
            ||.|||||.|||||.|||||||||||||.||.|||.|..|||||||||  ||||  |||.|.||||||||||||
Sbjct  844  AAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGGGCGTAGGGGCCGG--CGCCCTGGGGGGCTGTCTGTGACC  915

Query 1150  CTGACCCCTGGCCACGGAGACCTGGACCCGCCCGTGGGCTTCCAGCTGTACCCGGAGATATTCCAGGAGTGTGG  1223
            |||||.||||.||.|||.||||||||||||||.|||||||||||||||||.||.||||||||||||||.|||||
Sbjct  916  CTGACTCCTGTCCGCGGGGACCTGGACCCGCCTGTGGGCTTCCAGCTGTATCCAGAGATATTCCAGGAATGTGG  989

Query 1224  G  1224
            |
Sbjct  990  G  990

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.