Nucleotide Global Alignment

Description

• Query: TRCN0000467101
• Subject: XM_011524695.2
• Aligned Length: 1052
• Identities: 775
• Gaps: 241

Alignment

Query    1  ATGGC------------------GGGGAAGAAGAATGTTCTGTCGTCTCTCGCAGTTTACGCGGAAGAT--TCA  54
            |||||                  .|||.|||||||              ||.||.|.||     ||.||  |.|
Sbjct    1  ATGGCCCAGCTTGTTGGACTCAGAGGGCAGAAGAA--------------TCACATTCTA-----AACATGATAA  55

Query   55  GAGCCCGAGTCTGATGGCGAGGCTGGAATCGAGGCGGTGGGCAGCGCGGCTGAGGAGAAAGGCGGATTGGTATC  128
            |||.|   ||               ||.||.|         ||.|    ||.||                   |
Sbjct   56  GAGAC---GT---------------GACTCAA---------CAAC----CTCAG-------------------C  79

Query  129  TGATGCCTATGGGGAGGA----------TGACT--TTTC--TCGTCTAGGGGGTGATGAAGATGGTTATGAAGA  188
            ||| ||||   ||.||.|          ..|||  ||||  || ||.|               ||||...|| |
Sbjct   80  TGA-GCCT---GGCAGCACACACACCCCACACTCCTTTCCATC-TCCA---------------GGTTCACAA-A  132

Query  189  AG----AAGAAGATGAGAACAGTAGACAGTCGGAAGAT----GACGATTCAGAGACTGAAAAACCTGAGG----  250
            ||    ||||             ||.||...|||.|.|    |.|..||     |||   ..||||.|||    
Sbjct  133  AGCCACAAGA-------------AGCCACGGGGAGGCTCCTGGCCTCTT-----ACT---TTACCTAAGGAGGC  185

Query  251  -CTGATGACCCAAAGGATAATACAGAAGCAGAAAAGCGAGACCCCCAGGAACTCGTGGCCTCCTTTTCTGAAAG  323
             ||||.|...|||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  186  CCTGAAGTGGCAA--GATAATACAGAAGCAGAAAAGCGAGACCCCCAGGAACTCGTGGCCTCCTTTTCTGAAAG  257

Query  324  AGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACTTGCAAG  397
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  258  AGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGCCAGAACCCCCTGGCAGATGTTCAAATCACTTGCAAG  331

Query  398  ACAAGATCCAGAAGCTTTATGAACGAAAGATAAAGGAGGGAATGGATATGAACTACATTATCCAAAGGAAGAAA  471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  332  ACAAGATCCAGAAGCTTTATGAACGAAAGATAAAGGAGGGAATGGATATGAACTACATTATCCAAAGGAAGAAA  405

Query  472  GAATTTCGGAACCCTAGCATCTACGAGAAGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACTACCC  545
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  406  GAATTTCGGAACCCTAGCATCTACGAGAAGCTGATCCAGTTCTGTGCCATTGACGAGCTTGGCACCAACTACCC  479

Query  546  AAAGGATATGTTTGATCCCCATGGCTGGTCTGAGGACTCCTACTATGAGGCATTAGCCAAGGCCCAGAAAATTG  619
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  480  AAAGGATATGTTTGATCCCCATGGCTGGTCTGAGGACTCCTACTATGAGGCATTAGCCAAGGCCCAGAAAATTG  553

Query  620  AGATGGACAAATTGGAAAAGGCCAAAAAGGAGCGAACAAAA---------------------------------  660
            |||||||||||||||||||||||||||||||||||||||||                                 
Sbjct  554  AGATGGACAAATTGGAAAAGGCCAAAAAGGAGCGAACAAAAGCTTGTTGCAGGGACGTGTCTGCAGCGCCTGGG  627

Query  661  ------------------------------------------------ATTGAGTTTGTGACGGGCACCAAAAA  686
                                                            ||||||||||||||||||||||||||
Sbjct  628  GACCGGAGCTGTCCTTCCCCTGTGCGGGCGGGCACCGCCTCCTCCTGGATTGAGTTTGTGACGGGCACCAAAAA  701

Query  687  AGGCACCACGACCAACGCCACGTCCACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAA  760
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  702  AGGCACCACGACCAACGCCACGTCCACCACCACTACCACTGCCAGCACAGCTGTTGCAGATGCTCAGAAGAGAA  775

Query  761  AGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTCACCACCACAGCCACCCTG  834
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  776  AGAGCAAGTGGGATTCGGCTATCCCAGTGACAACGATAGCCCAGCCCACCATCCTCACCACCACAGCCACCCTG  849

Query  835  CCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGCTCCAAGACCACCGTCATCTCTGCTGTGGGCACCATTGT  908
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  850  CCAGCTGTTGTCACGGTCACCACCAGCGCCAGCGGCTCCAAGACCACCGTCATCTCTGCTGTGGGCACCATTGT  923

Query  909  GAAGAAGGCCAAGCAG  924
            ||||||||||||||||
Sbjct  924  GAAGAAGGCCAAGCAG  939