Nucleotide Global Alignment
Description
- Query:
- TRCN0000467153
- Subject:
- XM_006513538.3
- Aligned Length:
- 5993
- Identities:
- 908
- Gaps:
- 4963
Alignment
Query 1 ATGGCG---ACCGCAGATACTCCGGCCCCGGCCTCCAGTGGCCTCTCGCCGAAGGAAGAAGGGGAGCTTGAAGA 71
|||||| .||||.|||.||.||.||||||||||.||.|||||||||||||||||||||||||||||.|||||
Sbjct 1 ATGGCGGCCGCCGCCGATCCTTCGACCCCGGCCTCTAGCGGCCTCTCGCCGAAGGAAGAAGGGGAGCTCGAAGA 74
Query 72 TGGGGAAATCAGTGACGACGATAATAACAGCCAGATACGGAGTCGGAGCAGCAGCAGCAGCAGCGGCGGCGGGC 145
.|||||.|||||.||||||| |.|||||||.||..|||| |.||||||||||||||||||||||||||||
Sbjct 75 CGGGGAGATCAGCGACGACG---ACAACAGCCGGAGCCGGA---GCAGCAGCAGCAGCAGCAGCGGCGGCGGGC 142
Query 146 TGTTACCCTATCCGCGGCGAAGGCCTCCTCACTCGGCCCGGGGCGGTGGATCTGGCGGA---GGCGGTGGCTCT 216
|||||||.||.||||||||..|||||||||.|.|||||||||||||||||||.||.||| |||||.|||||.
Sbjct 143 TGTTACCGTACCCGCGGCGGCGGCCTCCTCCCCCGGCCCGGGGCGGTGGATCCGGGGGAGGCGGCGGCGGCTCC 216
Query 217 TCCTCGTCATCGTCCTCTTCTCAGCAGCAGCTGAGGAATTTCTCACGCTCGCGGCACGCGTCTGAGCGGGGCCA 290
||.||.||.|||||.||.||.|||||||||||||||||||||||||||||.||||||.||.|.|||||||||||
Sbjct 217 TCGTCCTCCTCGTCGTCCTCCCAGCAGCAGCTGAGGAATTTCTCACGCTCACGGCACCCGGCCGAGCGGGGCCA 290
Query 291 CCTCAGGGGACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGTCTCATCCGCCTTCTGTACGGATGCCTTCGA 364
.||||||||||||||||||||||||||||||||||||||||||.||||.|||||..|.|..||||||||.|||.
Sbjct 291 GCTCAGGGGACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGACTCACCCGCCCCCAGGGCGGATGCCGTCGG 364
Query 365 GCTCACTGTCCGAAAGCAGTCCCCGGCCGTCTTTCTGGGAGCGGAGCCACCTCGCCTTGGACCGTTTCCGCTTT 438
|.||.|||||.||||||||.|||||||||||.||||||||||||||||||.|||||.|||||||||||||||||
Sbjct 365 GGTCCCTGTCGGAAAGCAGCCCCCGGCCGTCCTTCTGGGAGCGGAGCCACATCGCCCTGGACCGTTTCCGCTTT 438
Query 439 CGAG---GCAGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGCGAGGAGTGGGTGAGCGAGGAGGCAAGCC 509
|||| |||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 439 CGAGGCAGCAGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGCGAGGAGTGGGGGAGCGAGGAGGCAAGCC 512
Query 510 GGGGTGCAGACCTCCTCTGGG---------AGGAGGAGCAGGATCCGGGTTCAGCAGCAGTCAGAGCTGGCGAG 574
||||||||||||||||...|| |||||||||.||||||||.|||.|||||||.|||||||||||||
Sbjct 513 GGGGTGCAGACCTCCTGGAGGAGGAGGATCAGGAGGAGCGGGATCCGGATTCGGCAGCAGCCAGAGCTGGCGAG 586
Query 575 AGCCCTCTCCACCTCGGAAGAGCTCCAAAAGTTTTGGAAGGTCTCCATCAAGAAAACAAAATTATTCATCAAAA 648
|.|||||||||||.||.||||||||||||||.||||||||.|||||||||||||||||.|||.|.|||||.|||
Sbjct 587 AACCCTCTCCACCCCGCAAGAGCTCCAAAAGCTTTGGAAGATCTCCATCAAGAAAACAGAATCACTCATCCAAA 660
Query 649 AATGAAAACTGTGTGGAAGAAACTTTTGAAGATTTGCTTTTAAAGTATAAACAAATACAGTTGGAACTAGAATG 722
|..||.|||||||.||||||||||||||||||||||||||||||||||||.||||||||..||||||||||.||
Sbjct 661 AGCGAGAACTGTGCGGAAGAAACTTTTGAAGATTTGCTTTTAAAGTATAAGCAAATACAACTGGAACTAGAGTG 734
Query 723 CATCAATAAGGATGAAAAACTAGCATTGAGTAGCAAAGAAGAGAATGTGCAGGAAGATCCTAAAACATTGAACT 796
|||||||||||||||||||||.||..||||||||||||||||||.||..|||||||||||.|||||||||.|.|
Sbjct 735 CATCAATAAGGATGAAAAACTGGCTCTGAGTAGCAAAGAAGAGACTGCACAGGAAGATCCGAAAACATTGCATT 808
Query 797 TCGAGGACCAAACTAGCACTGATAATGTCAGTATTACAAAGGATTCAAGTAAAGAAGTAGCTCCTGAGGAGAAA 870
|.|||||||||||.|||||.|||||||..|||||||||||.||..|||||||.|||||.||||||||||||||.
Sbjct 809 TGGAGGACCAAACAAGCACCGATAATGCTAGTATTACAAAAGACCCAAGTAAGGAAGTGGCTCCTGAGGAGAAG 882
Query 871 ACACAAGTCAAAACTTTTCAGGCATTTGAATTAAAACCACTCAGGCAAAAATTGACTTTACCAGGAGATAAGAA 944
|||||.|||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||.||||||||
Sbjct 883 ACACAGGTCAAAACTTTTCAGGCATTTGAATTAAAACCACTCAGGCAAAAACTGACTTTACCAGGGGATAAGAA 956
Query 945 CCGTTTGAAAAAAGTTAAAGATGGAGCAAAACCACTTTCCCTGAAATCCGACACTACTGATTCTAGTCAAGG-- 1016
|||..|.||||.||..||.||||||.|||..|..||||||.||||||||..||||||.|||.||||.|||||
Sbjct 957 CCGGGTCAAAAGAGGGAAGGATGGAACAAGGCAGCTTTCCTTGAAATCCAGCACTACGGATGCTAGCCAAGGAT 1030
Query 1017 -------TAATGGAATTAAATATT-----------TCAGT---------------------------------- 1038
||| .|||..|||| || |||||
Sbjct 1031 TAGAAGATAA-AGAACAAAAT-TTAACAAGAAGACTCAGTGCCTCAGATATTGTATCTGAAAAGAAACTTGGTG 1102
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1103 AAGAAGAAGAGGAACTGTCTGAGCTGCAGCTTCGCCTGTTGGCTCTTCAGTCGGCTAGTAAGAAATGGCAGCAG 1176
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1177 AAAGAGCAGCAGGTGATGAAGGAGAGCAAAGAAAAACTGACCAAGACCAAAACTGCACAGCAAAAGGCCAAAAC 1250
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1251 CAGCACAAAAGCACACTCGGCCAAGAAAGTGAGCGCCACAGCTAAACAAGCACTGCGGAAGCAGCAGACAAAGG 1324
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1325 CGTGGAAGAAGCTCCAGCAGCAGAAAGAGCAGGAGAGACAGAAAGAGGAGGATCAGCGGAAACACGCTGAGGAA 1398
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1399 GAAGAGAGGAGGAAAAGAGAAGAAGAAATCAGAAAGATCCGAGACCTTTCCAACCAGGAAGAGCAGTACAATCG 1472
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1473 GTTCATGAAGTTGGTTGGTGGGAAGAGGCGAGCAAGAAGTAAATCTTCAGATCCTGACCTGAGGCGGTCCTTAG 1546
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1547 AAAAGCAGTCTGACAGTGCAGGAGGCATATATCAGTATGATAACTACGAAGAAGTTGCTATGGATACAGATAGT 1620
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1621 GAAACCAGTTCTCCAGCAGCGCCTTCACCCGTACAGCCACCGTTTTTTCCTGAGTGTTCACTGGGGTATTTTTC 1694
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1695 TTCAGCACCGTCTGTTTCTTTGCCTCCACCAGCTCAGGTTTCATCTGTGCCATCTTTGAACCAACCTTATGGGG 1768
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1769 AAGGCCTGTGCGTTTCTCTCGACCCTCTACCTCCTCTTCCACCTTTGCCACCTCTACCACCTGAAGATCCAGAA 1842
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1843 CAGCCTCCAAAGCCACCATTTGCAGATGAAGAGGAGGAGGAAGAAATGCTCCTTCGAGAAGAACTGCTTAAATC 1916
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1917 TCTAGCAAGTAAAAGAGCTTTTAAGCCAGAGGAAACATCCAGTAATAGCGACCCACCTTCACCTCCAGTTTTGA 1990
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1991 ACAATTCCCAGCCTTTGTCAAGAAGCAACCTATCAATAGTCAGTATTAATACAGTATCTCAGCCTAGGATACAG 2064
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2065 AATCCAAAGTTCCACAGAGGACCTCGTCTTCCACGAACTGTGATCTCGCTTCCAAAACACAAATCAGTGGTTGT 2138
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2139 AACCCTGAATGACTCAGATGACAGTGAGTCTGACGGAGAAGCTTCCAAGTCAACCAACAGTGTGTTTGGTGGAT 2212
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2213 TAGAGTCCATGATCAAAGAAGCAAGGCGGACTGCAGAGCAAGCATCAAAACCCAAAGTACCTCCAAAGTCTGAG 2286
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2287 AAAGAAAACGACCCTCTGCGGACCCCTGAAGCCTTGCCTGAAGAAAAGAAGATGGAATACAGATTGTTAAAAGA 2360
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2361 AGAGATTGCCAATCGTGAGAAGCAACGTTTGATTAAATCAGATCAGCTGAAGACAAGTTCGTCGTCTCCAGCAA 2434
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2435 ACTCAGATGTGGAAATGGATGGGATTGGTAGAATAGCAATGGTTACTAAGCAAGTTGCAGATGCAGAAGCAAAG 2508
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2509 CTTAAAAAACACAAGATTCTCTTGATTAAAGATGAATCAGTTTTAAAAAATCTAGTACTGCAAGAAGCCAAGAA 2582
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2583 GAAAGAGTCTGTTCGAAATGCTGAAGCAAAAATTACAAAACTTACAGAACAGCTGCAGGCAGCAGAGAAAATCC 2656
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2657 TCAGTGCTAACAGGATGTTTCTGAAGAAGCTCCAGGAACAAATTCACAGAGTTCAACAGCGTGTTACCATTAAG 2730
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2731 AAAGCGTTGACTCTGAAGTATGGAGAAGAGCTTGCTCGGGCAAAGGCAGTGGCTAGCAAAGAACTAGGGAAACG 2804
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2805 CAAACTGGAGCAGGACCGTCTTGGACCAAACAAAATGATGAGACTGGATAATTCTCCAATATCAAGTCCAAGGA 2878
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2879 AGCATTCAGCAGAATTAATTGCTATGGAAAAAAGACGATTACAAAAGCTAGAATATGAATATGCCTTGAAAATT 2952
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2953 CAAAAGTTAAAAGAAGCCCGAGCCCTCAAAGCAAAGGAACAACAAAACCTCGTTCCCGTAGTGGAAGAGGAACC 3026
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3027 TGAGTTTTCTGTACCTCAACCCTCGCTTCATGATCTGACACAGGATAAATTAACCTTGGACACAGAAGAAAATG 3100
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3101 ATGTTGATGATGAAGTTTTGTCAGGTGCAAGCAGAGAACGAAGAAGATCCTTCCTAGAGTCCAATTCTTTCACT 3174
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3175 AAACCCAACCTTAAGCACACTGACACACCTAACAAAGAGTGTATAAACAAACTTAGTAAGAGTACTGTAGAAAA 3248
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3249 ACCAGAACTTTTTCTAGGGTTAAAAATAGGTGAACTACAAAAATTATATTCAAGAGCTGACAGTTTAAAACAGT 3322
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3323 TGATTTTAAAAACGACCACAGGCACTACAGAAAAAGTTCTGCATGGCCAGGAGATTTCTGTGGATGTGGATTTT 3396
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3397 GTTACAGCACAGAGTAAAACAACAGAAGTGAAGCCATGTCCATTTAGACCTTACCAGAGCCCTCTTCTTGTCTT 3470
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3471 TAAATCCTACAGATTTAGTCCTTACTACCGAACCAAGGAAAAGCTCCCTCTAAGCTCAGTATCTTACAGTAACA 3544
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3545 TGGTTGAGCCGGATCAGTGTTTCTGCCGCTTTGACTTAACAGGAACATGTAATGATGATGACTGTCAGTGGCAG 3618
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3619 CATGTACAAGACTATACACTTAGCAGGAAACGGTTGTTCCAGGACATTCTCTCATACAATCTGTCTTTGATTGG 3692
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3693 CTGTTCAGAGATGAGCACTGATGAGGAAATTGCTTCTGCAGCAGAAAAATATGTTGAAAAACTTTTTGGAGTAA 3766
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3767 ACAAAGACCGGATGTCAATGGACCAGATGGCTGTTCTCCTTGTCAGCAATGTTAATGAAAGTAAAGGCCATACA 3840
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3841 CCTCCATTTACAACTTACAAAGATAAAAGAAAATGGAAGCCAAAGTTTTGTAGAAAGCCTGTATCAGAGAATAG 3914
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3915 CTGCAGTAGTGATGATGAGCAGTCTACAGGACCAATTAAGTACGCCTTCCGACCAGAGAAGCAAATAAATGTCC 3988
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3989 CAGCTCTGGACACCGTTGTCACTCCAGACGATGTTAGATATTTTACCAGTGAAACTGATGACATTGCTAACTTA 4062
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4063 GAAGCAAGTGTACTGGAAAATCCATCCCATGTACAACTTTGGCTCAAGCTTGCGTACAAGTACTTGAATCAAAA 4136
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4137 TGAGGGGCTGTGTTCAGAATCTTTGGACTCTGCTTTAAATGTACTGGCTCGAGCTCTGGAAAACAATAAAGACA 4210
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4211 ATCCAGAAATTTGGTGCCATTACCTCAGATTGTTCTCAAAAAGAGGGACCAAGGAGGAGGTGCAGGAAATGTGT 4284
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4285 GAAACAGCTGTTGAGTATGCTCCTGACTATCAAAGCTTTTGGACTTTTTTGCACCTAGAAAGCACCTTTGAAGA 4358
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4359 AAAGGATTATGTGTGTGAGAGGATGGTGGAGTTTCTGATGGGAGCGGCCAAGCGGGAAATATCAGATATTCTGT 4432
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4433 CCTTTCAGCTTTTAGAGGCTCTTTTGTTTAGAGTTCAGCTACATATATTTACTGGGAGATGCCAAAGTGCACTT 4506
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4507 GCAGTTTTACAGAATGCATTAAAATTGGCTAATGATGCAATAGTAGCTGAGTACCTTAAGACAGATGATCGGTG 4580
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4581 TCTGGCATGGCTGGCCTACATACATCTTATTGAATTCAATAGTCTCCCTTCAAAACTTTATGATCCATCTAATG 4654
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4655 CTAATCCTTCAAGAATTGTTAACACAGAACCGTTTGTAATGCCATGGCAAGCAGCTCAAGATGTCAAGACCAAT 4728
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4729 CCTGACTTATTGTTAGCAGTGTTTGAAGATGCGGTGAAAGCTTGTACAGATGAGACCCTTACCAGTGGAGAAAG 4802
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4803 AATAGAGGTCTGCCTTCCACTTTACACAAACATGATCGCTCTACACCAACTCCTAGAGAGGTATGAGGAGGCAG 4876
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4877 TGGAGCTTTGCACAAGCTTGTTGGAGTCGTGTCCCACAAACTGCCAGTTATTGGAAACCCTTGCAGCTTTGTAT 4950
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4951 TTGAAAACAGATCGATATGACAAAGCCCGAAGGGTTTGGCTTACTGCATTTGAAAATAACCCTCAGAATGCGGA 5024
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5025 AATTTTTTATCATCTCTGCAAATTTTTCATCTTGCAGGACGGAGGTGATAAGCTTCTTCCAGTTCTGAGGCAGT 5098
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5099 TCGTTGGATCCTTCTTTAAACCTGGCTTTGAGAAGTACAGTAATGTGGATTTATTTCGGTATCTCTTAAATATT 5172
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5173 CCAGGACCACTCGACATTCCAGCGTGCTTATGCAAAGGGAATTTCGATGATGATGCATTTAACAACCAAGTCCC 5246
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5247 TTATTTATGGCTGATTTACTGCCTTTGCCATCCTCTACAGTCCAGTATTAAAGAGACAGTGGAAGCGTATGAGG 5320
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5321 CGGCGTTAGGGGTGGCCATGAGGTCTGATATTGTGCAGAAGATTTGGATGGATTATCTTGTCTTTGCCAATAAT 5394
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5395 AGAGCTGCTGGATCCAGAAACAAAGTCCAAGAATTCAAACTTTTTACTGACCTAGTAAATAGATGTTTGGTTAC 5468
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5469 GGTGCCTGCCCGATACCCCATCCCTTTTAGCAGTGCTGATTACTGGTCCAACTATGAATTCCATAACCGGGTCA 5542
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5543 TTTTCTTTTATTTGAGCTGTGTTCCAAAGACTCAGCACTCTAAAACCCTGGAGCGGTTTTGCTCTGCTATGCCA 5616
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5617 GCAAATTCCCGACTTGCACTGAGGCTACTTCAACATGAATGGGAAGAAAGCAATGTTCAGATTCTGAAACTCCA 5690
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5691 AGCCAAGATGTTTACATATAATATCCCAACATGCCTGGCCACCTGGAAAATAGCCATTGCTGCTGAGATTGCTC 5764
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5765 TAAAGGGACAAAGAGAGGTCCACCGTTTATATCAGAGAGCCTTACAGAAGTTACCTCTTTGTGCATCACTATGG 5838
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5839 AAAGATGTAATGCTTTTTATCTTTTATTTTATCTTGATGTTTTCCTATAAATTTTCTGCATGTGCCATATCCAT 5912
Query 1039 ------------------------------------------------------------------------- 1038
Sbjct 5913 TGATGTGGTAAATGCTCAAAACCTCGCTCTCTCTTACTTCTATGCTTCCCTGTCTTTTACAGCAACTCTTGTT 5985
