Nucleotide Global Alignment
Description
- Query:
- TRCN0000467153
- Subject:
- XM_006513539.3
- Aligned Length:
- 5990
- Identities:
- 908
- Gaps:
- 4960
Alignment
Query 1 ATGGCG---ACCGCAGATACTCCGGCCCCGGCCTCCAGTGGCCTCTCGCCGAAGGAAGAAGGGGAGCTTGAAGA 71
|||||| .||||.|||.||.||.||||||||||.||.|||||||||||||||||||||||||||||.|||||
Sbjct 1 ATGGCGGCCGCCGCCGATCCTTCGACCCCGGCCTCTAGCGGCCTCTCGCCGAAGGAAGAAGGGGAGCTCGAAGA 74
Query 72 TGGGGAAATCAGTGACGACGATAATAACAGCCAGATACGGAGTCGGAGCAGCAGCAGCAGCAGCGGCGGCGGGC 145
.|||||.|||||.||||||| |.|||||||.||..|||| |.||||||||||||||||||||||||||||
Sbjct 75 CGGGGAGATCAGCGACGACG---ACAACAGCCGGAGCCGGA---GCAGCAGCAGCAGCAGCAGCGGCGGCGGGC 142
Query 146 TGTTACCCTATCCGCGGCGAAGGCCTCCTCACTCGGCCCGGGGCGGTGGATCTGGCGGA---GGCGGTGGCTCT 216
|||||||.||.||||||||..|||||||||.|.|||||||||||||||||||.||.||| |||||.|||||.
Sbjct 143 TGTTACCGTACCCGCGGCGGCGGCCTCCTCCCCCGGCCCGGGGCGGTGGATCCGGGGGAGGCGGCGGCGGCTCC 216
Query 217 TCCTCGTCATCGTCCTCTTCTCAGCAGCAGCTGAGGAATTTCTCACGCTCGCGGCACGCGTCTGAGCGGGGCCA 290
||.||.||.|||||.||.||.|||||||||||||||||||||||||||||.||||||.||.|.|||||||||||
Sbjct 217 TCGTCCTCCTCGTCGTCCTCCCAGCAGCAGCTGAGGAATTTCTCACGCTCACGGCACCCGGCCGAGCGGGGCCA 290
Query 291 CCTCAGGGGACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGTCTCATCCGCCTTCTGTACGGATGCCTTCGA 364
.||||||||||||||||||||||||||||||||||||||||||.||||.|||||..|.|..||||||||.|||.
Sbjct 291 GCTCAGGGGACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGACTCACCCGCCCCCAGGGCGGATGCCGTCGG 364
Query 365 GCTCACTGTCCGAAAGCAGTCCCCGGCCGTCTTTCTGGGAGCGGAGCCACCTCGCCTTGGACCGTTTCCGCTTT 438
|.||.|||||.||||||||.|||||||||||.||||||||||||||||||.|||||.|||||||||||||||||
Sbjct 365 GGTCCCTGTCGGAAAGCAGCCCCCGGCCGTCCTTCTGGGAGCGGAGCCACATCGCCCTGGACCGTTTCCGCTTT 438
Query 439 CGAG---GCAGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGCGAGGAGTGGGTGAGCGAGGAGGCAAGCC 509
|||| |||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 439 CGAGGCAGCAGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGCGAGGAGTGGGGGAGCGAGGAGGCAAGCC 512
Query 510 GGGGTGCAGACCTCCTCTGGG---------AGGAGGAGCAGGATCCGGGTTCAGCAGCAGTCAGAGCTGGCGAG 574
||||||||||||||||...|| |||||||||.||||||||.|||.|||||||.|||||||||||||
Sbjct 513 GGGGTGCAGACCTCCTGGAGGAGGAGGATCAGGAGGAGCGGGATCCGGATTCGGCAGCAGCCAGAGCTGGCGAG 586
Query 575 AGCCCTCTCCACCTCGGAAGAGCTCCAAAAGTTTTGGAAGGTCTCCATCAAGAAAACAAAATTATTCATCAAAA 648
|.|||||||||||.||.||||||||||||||.||||||||.|||||||||||||||||.|||.|.|||||.|||
Sbjct 587 AACCCTCTCCACCCCGCAAGAGCTCCAAAAGCTTTGGAAGATCTCCATCAAGAAAACAGAATCACTCATCCAAA 660
Query 649 AATGAAAACTGTGTGGAAGAAACTTTTGAAGATTTGCTTTTAAAGTATAAACAAATACAGTTGGAACTAGAATG 722
|..||.|||||||.||||||||||||||||||||||||||||||||||||.||||||||..||||||||||.||
Sbjct 661 AGCGAGAACTGTGCGGAAGAAACTTTTGAAGATTTGCTTTTAAAGTATAAGCAAATACAACTGGAACTAGAGTG 734
Query 723 CATCAATAAGGATGAAAAACTAGCATTGAGTAGCAAAGAAGAGAATGTGCAGGAAGATCCTAAAACATTGAACT 796
|||||||||||||||||||||.||..||||||||||||||||||.||..|||||||||||.|||||||||.|.|
Sbjct 735 CATCAATAAGGATGAAAAACTGGCTCTGAGTAGCAAAGAAGAGACTGCACAGGAAGATCCGAAAACATTGCATT 808
Query 797 TCGAGGACCAAACTAGCACTGATAATGTCAGTATTACAAAGGATTCAAGTAAAGAAGTAGCTCCTGAGGAGAAA 870
|.|||||||||||.|||||.|||||||..|||||||||||.||..|||||||.|||||.||||||||||||||.
Sbjct 809 TGGAGGACCAAACAAGCACCGATAATGCTAGTATTACAAAAGACCCAAGTAAGGAAGTGGCTCCTGAGGAGAAG 882
Query 871 ACACAAGTCAAAACTTTTCAGGCATTTGAATTAAAACCACTCAGGCAAAAATTGACTTTACCAGGAGATAAGAA 944
|||||.|||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||.||||||||
Sbjct 883 ACACAGGTCAAAACTTTTCAGGCATTTGAATTAAAACCACTCAGGCAAAAACTGACTTTACCAGGGGATAAGAA 956
Query 945 CCGTTTGAAAAAAGTTAAAGATGGAGCAAAACCACTTTCCCTGAAATCCGACACTACTGATTCTAGTCAAGG-- 1016
|||..|.||||.||..||.||||||.|||..|..||||||.||||||||..||||||.|||.||||.|||||
Sbjct 957 CCGGGTCAAAAGAGGGAAGGATGGAACAAGGCAGCTTTCCTTGAAATCCAGCACTACGGATGCTAGCCAAGGAT 1030
Query 1017 -------TAATGGAATTAAATATT-----------TCAGT---------------------------------- 1038
||| .|||..|||| || |||||
Sbjct 1031 TAGAAGATAA-AGAACAAAAT-TTAACAAGAAGACTCAGTGCCTCAGATATTGTATCTGAAAAGAAACTTGGTG 1102
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1103 AAGAAGAAGAGGAACTGTCTGAGCTGCAGCTTCGCCTGTTGGCTCTTCAGTCGGCTAGTAAGAAATGGCAGCAG 1176
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1177 AAAGAGCAGCAGGTGATGAAGGAGAGCAAAGAAAAACTGACCAAGACCAAAACTGCACAGCAAAAGGCCAAAAC 1250
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1251 CAGCACAAAAGCACACTCGGCCAAGAAAGTGAGCGCCACAGCTAAACAAGCACTGCGGAAGCAGCAGACAAAGG 1324
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1325 CGTGGAAGAAGCTCCAGCAGCAGAAAGAGCAGGAGAGACAGAAAGAGGAGGATCAGCGGAAACACGCTGAGGAA 1398
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1399 GAAGAGAGGAGGAAAAGAGAAGAAGAAATCAGAAAGATCCGAGACCTTTCCAACCAGGAAGAGCAGTACAATCG 1472
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1473 GTTCATGAAGTTGGTTGGTGGGAAGAGGCGAGCAAGAAGTAAATCTTCAGATCCTGACCTGAGGCGGTCCTTAG 1546
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1547 AAAAGCAGTCTGACAGTGCAGGAGGCATATATCAGTATGATAACTACGAAGAAGTTGCTATGGATACAGATAGT 1620
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1621 GAAACCAGTTCTCCAGCGCCTTCACCCGTACAGCCACCGTTTTTTCCTGAGTGTTCACTGGGGTATTTTTCTTC 1694
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1695 AGCACCGTCTGTTTCTTTGCCTCCACCAGCTCAGGTTTCATCTGTGCCATCTTTGAACCAACCTTATGGGGAAG 1768
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1769 GCCTGTGCGTTTCTCTCGACCCTCTACCTCCTCTTCCACCTTTGCCACCTCTACCACCTGAAGATCCAGAACAG 1842
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1843 CCTCCAAAGCCACCATTTGCAGATGAAGAGGAGGAGGAAGAAATGCTCCTTCGAGAAGAACTGCTTAAATCTCT 1916
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1917 AGCAAGTAAAAGAGCTTTTAAGCCAGAGGAAACATCCAGTAATAGCGACCCACCTTCACCTCCAGTTTTGAACA 1990
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 1991 ATTCCCAGCCTTTGTCAAGAAGCAACCTATCAATAGTCAGTATTAATACAGTATCTCAGCCTAGGATACAGAAT 2064
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2065 CCAAAGTTCCACAGAGGACCTCGTCTTCCACGAACTGTGATCTCGCTTCCAAAACACAAATCAGTGGTTGTAAC 2138
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2139 CCTGAATGACTCAGATGACAGTGAGTCTGACGGAGAAGCTTCCAAGTCAACCAACAGTGTGTTTGGTGGATTAG 2212
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2213 AGTCCATGATCAAAGAAGCAAGGCGGACTGCAGAGCAAGCATCAAAACCCAAAGTACCTCCAAAGTCTGAGAAA 2286
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2287 GAAAACGACCCTCTGCGGACCCCTGAAGCCTTGCCTGAAGAAAAGAAGATGGAATACAGATTGTTAAAAGAAGA 2360
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2361 GATTGCCAATCGTGAGAAGCAACGTTTGATTAAATCAGATCAGCTGAAGACAAGTTCGTCGTCTCCAGCAAACT 2434
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2435 CAGATGTGGAAATGGATGGGATTGGTAGAATAGCAATGGTTACTAAGCAAGTTGCAGATGCAGAAGCAAAGCTT 2508
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2509 AAAAAACACAAGATTCTCTTGATTAAAGATGAATCAGTTTTAAAAAATCTAGTACTGCAAGAAGCCAAGAAGAA 2582
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2583 AGAGTCTGTTCGAAATGCTGAAGCAAAAATTACAAAACTTACAGAACAGCTGCAGGCAGCAGAGAAAATCCTCA 2656
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2657 GTGCTAACAGGATGTTTCTGAAGAAGCTCCAGGAACAAATTCACAGAGTTCAACAGCGTGTTACCATTAAGAAA 2730
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2731 GCGTTGACTCTGAAGTATGGAGAAGAGCTTGCTCGGGCAAAGGCAGTGGCTAGCAAAGAACTAGGGAAACGCAA 2804
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2805 ACTGGAGCAGGACCGTCTTGGACCAAACAAAATGATGAGACTGGATAATTCTCCAATATCAAGTCCAAGGAAGC 2878
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2879 ATTCAGCAGAATTAATTGCTATGGAAAAAAGACGATTACAAAAGCTAGAATATGAATATGCCTTGAAAATTCAA 2952
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 2953 AAGTTAAAAGAAGCCCGAGCCCTCAAAGCAAAGGAACAACAAAACCTCGTTCCCGTAGTGGAAGAGGAACCTGA 3026
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3027 GTTTTCTGTACCTCAACCCTCGCTTCATGATCTGACACAGGATAAATTAACCTTGGACACAGAAGAAAATGATG 3100
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3101 TTGATGATGAAGTTTTGTCAGGTGCAAGCAGAGAACGAAGAAGATCCTTCCTAGAGTCCAATTCTTTCACTAAA 3174
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3175 CCCAACCTTAAGCACACTGACACACCTAACAAAGAGTGTATAAACAAACTTAGTAAGAGTACTGTAGAAAAACC 3248
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3249 AGAACTTTTTCTAGGGTTAAAAATAGGTGAACTACAAAAATTATATTCAAGAGCTGACAGTTTAAAACAGTTGA 3322
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3323 TTTTAAAAACGACCACAGGCACTACAGAAAAAGTTCTGCATGGCCAGGAGATTTCTGTGGATGTGGATTTTGTT 3396
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3397 ACAGCACAGAGTAAAACAACAGAAGTGAAGCCATGTCCATTTAGACCTTACCAGAGCCCTCTTCTTGTCTTTAA 3470
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3471 ATCCTACAGATTTAGTCCTTACTACCGAACCAAGGAAAAGCTCCCTCTAAGCTCAGTATCTTACAGTAACATGG 3544
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3545 TTGAGCCGGATCAGTGTTTCTGCCGCTTTGACTTAACAGGAACATGTAATGATGATGACTGTCAGTGGCAGCAT 3618
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3619 GTACAAGACTATACACTTAGCAGGAAACGGTTGTTCCAGGACATTCTCTCATACAATCTGTCTTTGATTGGCTG 3692
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3693 TTCAGAGATGAGCACTGATGAGGAAATTGCTTCTGCAGCAGAAAAATATGTTGAAAAACTTTTTGGAGTAAACA 3766
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3767 AAGACCGGATGTCAATGGACCAGATGGCTGTTCTCCTTGTCAGCAATGTTAATGAAAGTAAAGGCCATACACCT 3840
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3841 CCATTTACAACTTACAAAGATAAAAGAAAATGGAAGCCAAAGTTTTGTAGAAAGCCTGTATCAGAGAATAGCTG 3914
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3915 CAGTAGTGATGATGAGCAGTCTACAGGACCAATTAAGTACGCCTTCCGACCAGAGAAGCAAATAAATGTCCCAG 3988
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 3989 CTCTGGACACCGTTGTCACTCCAGACGATGTTAGATATTTTACCAGTGAAACTGATGACATTGCTAACTTAGAA 4062
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4063 GCAAGTGTACTGGAAAATCCATCCCATGTACAACTTTGGCTCAAGCTTGCGTACAAGTACTTGAATCAAAATGA 4136
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4137 GGGGCTGTGTTCAGAATCTTTGGACTCTGCTTTAAATGTACTGGCTCGAGCTCTGGAAAACAATAAAGACAATC 4210
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4211 CAGAAATTTGGTGCCATTACCTCAGATTGTTCTCAAAAAGAGGGACCAAGGAGGAGGTGCAGGAAATGTGTGAA 4284
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4285 ACAGCTGTTGAGTATGCTCCTGACTATCAAAGCTTTTGGACTTTTTTGCACCTAGAAAGCACCTTTGAAGAAAA 4358
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4359 GGATTATGTGTGTGAGAGGATGGTGGAGTTTCTGATGGGAGCGGCCAAGCGGGAAATATCAGATATTCTGTCCT 4432
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4433 TTCAGCTTTTAGAGGCTCTTTTGTTTAGAGTTCAGCTACATATATTTACTGGGAGATGCCAAAGTGCACTTGCA 4506
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4507 GTTTTACAGAATGCATTAAAATTGGCTAATGATGCAATAGTAGCTGAGTACCTTAAGACAGATGATCGGTGTCT 4580
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4581 GGCATGGCTGGCCTACATACATCTTATTGAATTCAATAGTCTCCCTTCAAAACTTTATGATCCATCTAATGCTA 4654
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4655 ATCCTTCAAGAATTGTTAACACAGAACCGTTTGTAATGCCATGGCAAGCAGCTCAAGATGTCAAGACCAATCCT 4728
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4729 GACTTATTGTTAGCAGTGTTTGAAGATGCGGTGAAAGCTTGTACAGATGAGACCCTTACCAGTGGAGAAAGAAT 4802
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4803 AGAGGTCTGCCTTCCACTTTACACAAACATGATCGCTCTACACCAACTCCTAGAGAGGTATGAGGAGGCAGTGG 4876
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4877 AGCTTTGCACAAGCTTGTTGGAGTCGTGTCCCACAAACTGCCAGTTATTGGAAACCCTTGCAGCTTTGTATTTG 4950
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 4951 AAAACAGATCGATATGACAAAGCCCGAAGGGTTTGGCTTACTGCATTTGAAAATAACCCTCAGAATGCGGAAAT 5024
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5025 TTTTTATCATCTCTGCAAATTTTTCATCTTGCAGGACGGAGGTGATAAGCTTCTTCCAGTTCTGAGGCAGTTCG 5098
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5099 TTGGATCCTTCTTTAAACCTGGCTTTGAGAAGTACAGTAATGTGGATTTATTTCGGTATCTCTTAAATATTCCA 5172
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5173 GGACCACTCGACATTCCAGCGTGCTTATGCAAAGGGAATTTCGATGATGATGCATTTAACAACCAAGTCCCTTA 5246
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5247 TTTATGGCTGATTTACTGCCTTTGCCATCCTCTACAGTCCAGTATTAAAGAGACAGTGGAAGCGTATGAGGCGG 5320
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5321 CGTTAGGGGTGGCCATGAGGTCTGATATTGTGCAGAAGATTTGGATGGATTATCTTGTCTTTGCCAATAATAGA 5394
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5395 GCTGCTGGATCCAGAAACAAAGTCCAAGAATTCAAACTTTTTACTGACCTAGTAAATAGATGTTTGGTTACGGT 5468
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5469 GCCTGCCCGATACCCCATCCCTTTTAGCAGTGCTGATTACTGGTCCAACTATGAATTCCATAACCGGGTCATTT 5542
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5543 TCTTTTATTTGAGCTGTGTTCCAAAGACTCAGCACTCTAAAACCCTGGAGCGGTTTTGCTCTGCTATGCCAGCA 5616
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5617 AATTCCCGACTTGCACTGAGGCTACTTCAACATGAATGGGAAGAAAGCAATGTTCAGATTCTGAAACTCCAAGC 5690
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5691 CAAGATGTTTACATATAATATCCCAACATGCCTGGCCACCTGGAAAATAGCCATTGCTGCTGAGATTGCTCTAA 5764
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5765 AGGGACAAAGAGAGGTCCACCGTTTATATCAGAGAGCCTTACAGAAGTTACCTCTTTGTGCATCACTATGGAAA 5838
Query 1039 -------------------------------------------------------------------------- 1038
Sbjct 5839 GATGTAATGCTTTTTATCTTTTATTTTATCTTGATGTTTTCCTATAAATTTTCTGCATGTGCCATATCCATTGA 5912
Query 1039 ---------------------------------------------------------------------- 1038
Sbjct 5913 TGTGGTAAATGCTCAAAACCTCGCTCTCTCTTACTTCTATGCTTCCCTGTCTTTTACAGCAACTCTTGTT 5982
