Nucleotide Global Alignment
Description
- Query:
- TRCN0000467401
- Subject:
- XR_001783189.1
- Aligned Length:
- 3277
- Identities:
- 1166
- Gaps:
- 1967
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCACCCCCCGAAATTGGCACTCAGCAGGTTGGGTAGAGACAGAGACCTGTCCGGTGTGGTCCAGGCTAAAGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCACCCTGTACTTAGTTTAGGGCCAGCTTATGAGGGGAACAGGAAGAAGCACAGGCCTTAGTTCCCAGAGTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAGAAAGGGGTGGCCCTGGGACAGAGGGAGAGCAAGGGATTGGCAGTGACTGTGGGCAGGGCCGGTCCGGACAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGCGGAGTCAACTTGTACACGTGAAAAACTCTGGCTGGGGCCCGGCTTTTGCCTTCCTCCTCCTCTTACCCAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTCCTGCACCCCTCCCTTCTCCCTTCTCCCGCAGCTCAGGTTACAGCTTCTTTGGGGGGAAAACCGCTCACCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCCAGGGCCAGGAAGAGCCAGGGTCCCGAGTAGGGACCCCGGCGGGGCGCGGGGCAGGGCACCTAAGCCTGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCGCGGCCGCGGAGGGCGGGAGCCGGCTCGCCACGACCGGGACACGCGCAGAGTCCGCCGCGGCGGCCAGAGA 518
Query 1 -------------------------------------------------------ATGAGCAAGATGAAGAACT 19
||||.||||||||||||||
Sbjct 519 GGGGCACCGCGCCGGGCAAGCTGAGCAAAGGACCCATCTTGGACCCCTGCTGATCATGAACAAGATGAAGAACT 592
Query 20 TTAAGCGCCGTTTCTCCCTGTCAGTGCCCCGCACTGAGACCATTGAAGAATCCTTGGCTGAATTCACGGAGCAA 93
|.|||||..|..|.||||||||.|||||||||.|.|||||||||||.||.||.||||||||.|||||.|||||.
Sbjct 593 TCAAGCGAAGGCTTTCCCTGTCCGTGCCCCGCCCAGAGACCATTGAGGAGTCGTTGGCTGAGTTCACTGAGCAG 666
Query 94 TTCAACCAGCTCCACAACCGGCGGAATGAGAACTTGCAGCTCGGTCCTCTTGGCAGAGACCCCCCGCAGGAGTG 167
||||||||.|||||||..|.|..|||||||.| |||||.|
Sbjct 667 TTCAACCAACTCCACACTCAGACGAATGAGGA------------------TGGCACA----------------- 705
Query 168 CAGCACCTTCTCCCCAACAGACAGCGGGGAGGAGCCGGGGCAGCTCTCCCCTGGCGTGCAGTTCCAGCGGCGGC 241
||.|||||.|.||||||.||.||||||.||||||..||.|..||||
Sbjct 706 ----------------------------GATGAGCCTGAGCAGCTGTCTCCTGGCATGCAGTATCAACAACGGC 751
Query 242 AGAACCAGCGCCGCTTCTCCATGGAGGACGTCAGCAAGAGGCTCTCTCTGCCCATGGATATCCGCCTGCCCCAG 315
|||||||||||||.|||||||||||||||.|||.||||||||||||||||||||||||.||||||||.||||||
Sbjct 752 AGAACCAGCGCCGATTCTCCATGGAGGACCTCAACAAGAGGCTCTCTCTGCCCATGGACATCCGCCTACCCCAG 825
Query 316 GAATTCCTACAGAAGCTACAGATGGAGAGCCCAGATCTGCCCAAGCCGCTCAGCCGCATGTCCCGCCGGGCCTC 389
||||||||.||||||||||||.||||||.|||||..|||||||||||.||||.|||||||||||||||.|||||
Sbjct 826 GAATTCCTGCAGAAGCTACAGCTGGAGAACCCAGGGCTGCCCAAGCCTCTCACCCGCATGTCCCGCCGTGCCTC 899
Query 390 CCTGTCAGACATTGGCTTTGGGAAACTGGAAACATACGTGAAACTGGACAAACTGGGAGAGGGCACCTATGCCA 463
|||||||||.||.|||||||||||||||||||||||.||||||||||||||||||||.|||||.||||||||||
Sbjct 900 CCTGTCAGATATCGGCTTTGGGAAACTGGAAACATATGTGAAACTGGACAAACTGGGGGAGGGTACCTATGCCA 973
Query 464 CAGTCTTCAAAGGGCGCAGCAAACTGATGGAGAACCTTGTGGCCCTGAAAGAGATCCGGCTGGAGCACGAGGAG 537
|.||||||||.||.||||||||.||||..||||||||.|||||||||||.|||||||||||||||||.|||||.
Sbjct 974 CCGTCTTCAAGGGACGCAGCAAGCTGACAGAGAACCTCGTGGCCCTGAAGGAGATCCGGCTGGAGCATGAGGAA 1047
Query 538 GGAGCGCCCTGCACTGCCATCCGAGAGGTGTCTCTGCTGAAGAACCTGAAGCACGCCAATATTGTGACCCTGCA 611
||.||||||||||||||.||.|||||||||||||||||||||.|||||||.|||||||||||||||||||||||
Sbjct 1048 GGGGCGCCCTGCACTGCTATTCGAGAGGTGTCTCTGCTGAAGGACCTGAAACACGCCAATATTGTGACCCTGCA 1121
Query 612 TGACCTCATCCACACAGATCGGTCCCTCACCCTGGTGTTTGAGTACCTGGACAGTGACCTGAAGCAGTATCTGG 685
|||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.||.|
Sbjct 1122 TGACCTCATTCACACAGATCGGTCCCTCACCCTGGTGTTTGAGTACCTGGACAGTGACCTGAAACAGTACCTAG 1195
Query 686 ACCACTGTGGGAACCTCATGAGCATGCACAACGTCAAGATTTTCATGTTCCAGCTGCTCCGGGGCCTCGCCTAC 759
|||||||||||||||||||||.|||||||||.||||||||.|||||||||||||||||||||||.||.||||||
Sbjct 1196 ACCACTGTGGGAACCTCATGAACATGCACAATGTCAAGATATTCATGTTCCAGCTGCTCCGGGGTCTGGCCTAC 1269
Query 760 TGTCACCACCGCAAGATCCTGCACCGGGACCTGAAGCCCCAGAACCTGCTCATCAACGAGAGGGGGGAGCTGAA 833
||.||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||.||||||||
Sbjct 1270 TGCCACCACCGCAAGATCCTGCACCGGGACCTGAAGCCCCAGAACCTACTCATCAATGAGAGGGGCGAGCTGAA 1343
Query 834 GCTGGCCGACTTTGGACTGGCCAGGGCCAAGTCAGTGCCCACAAAGACTTACTCCAATGAGGTGGTGACCCTGT 907
|||||||||||||||.||||||.|||||||.||||||||.||||||||.||.||||||||||||||||||||.|
Sbjct 1344 GCTGGCCGACTTTGGCCTGGCCCGGGCCAAATCAGTGCCTACAAAGACCTATTCCAATGAGGTGGTGACCCTCT 1417
Query 908 GGTACAGGCCCCCCGATGTGCTGCTGGGATCCACAGAGTACTCCACCCCCATTGATATGTGGGGCGTGGGCTGC 981
|||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 1418 GGTACAGGCCCCCAGATGTGCTGCTGGGATCCACAGAGTACTCCACCCCCATTGACATGTGGGGCGTGGGCTGC 1491
Query 982 ATCCACTACGAGATGGCCACAGGGAGGCCCCTCTTCCCGGGCTCCACAGTCAAGGAGGAGCTGCACCTCATCTT 1055
||||.|||.|||||||||||.||.|.||||||||||||||||||.||.||||||||||||.|||||||||||||
Sbjct 1492 ATCCTCTATGAGATGGCCACCGGCAAGCCCCTCTTCCCGGGCTCTACTGTCAAGGAGGAGTTGCACCTCATCTT 1565
Query 1056 TCGCCTCCTCGGGACCCCCACAGAAGAGACGTGGCCCGGCGTGACCGCCTTCTCTGAGTTCCGCACCTACAGCT 1129
.||.|||||.|||||.||.|||||||||.|||||||.||.|||||..||.||||||||||.||..||||||.||
Sbjct 1566 CCGTCTCCTAGGGACACCTACAGAAGAGTCGTGGCCGGGTGTGACGTCCATCTCTGAGTTTCGAGCCTACAACT 1639
Query 1130 TCCCCTGCTACCTCCCGCAGCCGCTCATCAACCACGCGCCCAGGTTGGATACGGATGGCATCCACCTCCTGAGC 1203
|||||.|.|||||.||.|||||.||..|||.||||||.||||
Sbjct 1640 TCCCCCGATACCTACCACAGCCACTGCTCAGCCACGCCCCCA-------------------------------- 1681
Query 1204 AGCCTGCTCCTGTATGAATCCAAGAGTCGCATGTCAGCAGAGGCTGCCCTGAGTCACTCCTACTTCCGGTCTCT 1277
|||||||||||||||||||||||||||||||||.|||||.|.||||.|||||||||.||||||
Sbjct 1682 -----------GTATGAATCCAAGAGTCGCATGTCAGCAGAGGCAGCCCTCAATCACCCCTACTTCCAGTCTCT 1744
Query 1278 GGGAGAGCGTGTGCACCAGCTTGAAGACACTGCCTCCATCTTCTCCCTGAAGGAGATCCAGCTCCAGAAGGACC 1351
.|||||.||.||.||.|||||..|.|||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1745 CGGAGACCGAGTTCATCAGCTCCATGACACTGCCTCCATCTTCTCCCTGAAGGAGATCCAGCTCCAAAAGGACC 1818
Query 1352 CAGGCTACCGAGGCTTGGCCTTCCAGCAGCCAGGACGAGGGAAGAACAGGCGGCACAGCATCTTC--------- 1416
|||||||.||.|||.|||||||||||||.|||||.||||||||||.|.|||||||.|||||||||
Sbjct 1819 CAGGCTATCGTGGCCTGGCCTTCCAGCACCCAGGGCGAGGGAAGAGCCGGCGGCAGAGCATCTTCTGAACCATG 1892
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 1893 CCCACCCTGCTGCACCTTGAGGGATGAGAGGCCACACGGAACATGAACTCAGGAAGTATATGGGGCCTGTGTGG 1966
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 1967 CCATCAGAGGGCTGAACAATGAATGCCTGTGGCCAGCCTGGAGGGCCACTCGGCAGCCCTGTTGGTAGCATTTG 2040
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2041 CTTCCTTCCCTTGCTTGCCACACAGCTCTGTGGTGGCCTCTACCCGGATACCATTCCCCTTGTCACCCACTGTG 2114
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2115 GGATGGGGCGTGAGGTCACTTCCCGAGGGGAAGTGAGGTCACGGAGGTCCTTGGGACCCTTTCCCAATGGAAGT 2188
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2189 GCAGGAGAATGTGGGGGCCCTGGCCCTGCCGACTCATCGGCTTGACAAACCCCCTTCTTATTCCTTGGACCCTG 2262
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2263 ACTTCATCTTCTTCCCCTCTGAGAACGAGGAATATGGCACCTGACCTGGGACCCTGGAATTGTTCCCATGGGTG 2336
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2337 TGCTGACCCCACCCAAAGGCAGACATTCCTGGAACATCAGAAAAAAGTAGTACCTCCTCTTGTCACCTCCCCCA 2410
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2411 CCATGCTATTGTCCCCTCCTTGCCAGAAGCCCTGTACCCTCTGGCTTGACCCAAGGCTAAAAAGCACCAGCATG 2484
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2485 CTGCCCATGTCCAGCTGCATCCGGAAGTGTTCTGGTACTCCAAGATGTACTCCTACAGCCTCAGCCAGCCCCTG 2558
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2559 CCCGTCCCCCCAGTCTGGAAAGGGTTGCCTTAAACTGGCAGGTGGTAGAGTGCACTCTGTCCTTGGAACTCTGA 2632
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2633 CCTAGCACCTATGTCCTTCTTCCCTAAGCCACTCCTATGAGTGTTATCATTCCTGAGGGCTGATAAGACAACCC 2706
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2707 TGTCTCAGGGTCCTGAGGCTGGCACCCAGATAGGCAAGGTCACCTTGACACTGGTACCATGGTAACCTTGGCTC 2780
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2781 TTTAGGGCTGGTGCAGCCTCCTCTCCACACCCCACCACTTTCCCAGCCCTGTCTACCTGACCCTGGCACTGGCC 2854
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2855 TCCACAGAAAGGGTGGGAAGGGAGTCCGCACTGCAGCCTAAGCTGGAGAGAGGTGAGATTGCAGCAGGTTTGAT 2928
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 2929 CCTGAGAGCCTCATCCTACATCCCTAGAGAAGGCACCCTTCCTCTGTACTCCTCTCATGGTGTAGGGTCTCTCC 3002
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3003 AACATTTGGCTGAACTTGAAGGGCAAAGACCAAGGGGAGGTCAAGCCCCAATGCCTGTCCTAACCCCTGGGAGC 3076
Query 1417 -------------------------------------------------------------------------- 1416
Sbjct 3077 CTGGGTTCTCCCTAACCCCCTTTCCCACTGACTGTGAATGTCGTGACTCAGAGCAAAGACAGAGAATATATTTA 3150
Query 1417 --------------------- 1416
Sbjct 3151 ATTCATGTTGTACAAAAAGCA 3171
