Nucleotide Global Alignment

Description

Query:
TRCN0000467596
Subject:
XM_017313011.1
Aligned Length:
1878
Identities:
1581
Gaps:
99

Alignment

Query    1  ATGGAGACGCCGCCGCTGCCTCCCGCATGCACAAAGCAGGGTCATCAGAAGCCTCTCGATTCAAAAGATGATAA  74
            ||||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||.||.||
Sbjct    1  ATGGAGACGCCGCCACTGCCTCCCGCATGCACAAAGCAGGGTCATCAGAAGCCCCTCGATTCAAAAGACGAGAA  74

Query   75  TACCGAAAAACACTGCCCAGTGACAGTGAATCCTTGGCATATGAAGAAAGCTTTCAAAGTCATGAACGAATTAA  148
            |.|.||.|||||.||||||.||||.|||||.||.|||||.|||||||||||.||.|||||||||||||||.|.|
Sbjct   75  TCCTGAGAAACATTGCCCACTGACGGTGAACCCCTGGCACATGAAGAAAGCCTTTAAAGTCATGAACGAACTCA  148

Query  149  GAAGTCAAAATTTGCTGTGCGATGTCACAATTGTGGCAGAAGACATGGAAATTTCTGCTCATAGAGTGGTGCTG  222
            |||||||||||.|||||||.||.|||||.||||||||||||||||||||.||..|||||||..|.|||||||||
Sbjct  149  GAAGTCAAAATCTGCTGTGTGACGTCACGATTGTGGCAGAAGACATGGAGATCCCTGCTCACCGCGTGGTGCTG  222

Query  223  GCCGCCTGTAGTCCTTATTTTCATGCCATGTTTACAGGTGAGATGAGTGAGAGCCGAGCAAAGAGAGTTAGAAT  296
            ||.|||||.|||||.||.||.||.|||||||||||||||||||||||.|||||||||||||||||||||.||||
Sbjct  223  GCGGCCTGCAGTCCGTACTTCCACGCCATGTTTACAGGTGAGATGAGCGAGAGCCGAGCAAAGAGAGTTCGAAT  296

Query  297  AAAAGAGGTAGATGGCTGGACCCTGAGGATGCTAATTGATTATGTTTACACTGCAGAAATTCAGGTTACAGA--  368
            |||.|||||.||.||||||||||||||||||||..|.|||||.||||||||.|||||.||||||||.|||||  
Sbjct  297  AAAGGAGGTGGACGGCTGGACCCTGAGGATGCTGGTCGATTACGTTTACACGGCAGAGATTCAGGTCACAGAGG  370

Query  369  -----------------------------------------------AGAAA----------------------  373
                                                           |||||                      
Sbjct  371  AGAACGTGCAGGTGCAATGTAAGTCACTGCATAGAGGATGGAAGAACAGAAAAGAATCAAAGACAACCAGCGGC  444

Query  374  ----------------------------ATGTACAGGTACTTCTCCCAGCAGCTGGTCTCTTACAGTTACAGGA  419
                                        |||.||||||.||.||||||||||||||.||..|||||||||||||
Sbjct  445  CGGCCATCTGGAGTATCCTATAGTTTGTATGAACAGGTCCTCCTCCCAGCAGCTGGCCTGCTACAGTTACAGGA  518

Query  420  TGTGAAGAAGACTTGTTGTGAATTTTTGGAATCCCAGCTTCACCCTGTCAACTGCTTAGGAATCCGGGCTTTTG  493
            ||||||||||||.||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGTGAAGAAGACATGCTGTGAATTTTTAGAATCCCAGCTTCACCCTGTCAACTGCTTAGGAATCCGGGCTTTTG  592

Query  494  CTGATATGCATGCATGTACCGACCTTCTGAACAAGGCCAACACCTATGCAGAGCAACATTTTGCAGATGTTGTA  567
            ||||||||||||||||.||.|||||.|||||.|||||||||||.||||||||.|||||||||||||||||.|||
Sbjct  593  CTGATATGCATGCATGCACAGACCTCCTGAATAAGGCCAACACGTATGCAGAACAACATTTTGCAGATGTCGTA  666

Query  568  CTTAGTGAAGAATTTCTCAATCTTGGCATCGAACAAGTGTGCAGCTTAATCTCAAGTGACAAACTTACCATTTC  641
            |||||||||||.|||||.||.||.||||||||.||.|||||||||||||||||.|||||.|||||.||||||||
Sbjct  667  CTTAGTGAAGAGTTTCTTAACCTCGGCATCGAGCAGGTGTGCAGCTTAATCTCCAGTGATAAACTCACCATTTC  740

Query  642  TTCAGAAGAGAAGGTATTTGAAGCAGTAATAGCATGGGTGAACCATGACAAGGATGTGAGGCAAGAGTTTATGG  715
            .||.||.||||||||||||||||||||.||.||.|||||.|||||.||.|||||.||.||.||.|||||.||||
Sbjct  741  CTCCGAGGAGAAGGTATTTGAAGCAGTCATCGCCTGGGTAAACCACGATAAGGACGTAAGACAGGAGTTCATGG  814

Query  716  CCCGACTGATGGAACATGTACGGTTACCTTTGCTTCCTCGGGAATATTTAGTTCAGAGGGTTGAAGAGGAAGCA  789
            |.||.||.|||||.|||||.||.||||||.|||||||||||||.||.||.||.|||.|||||||||||||||||
Sbjct  815  CTCGGCTCATGGAGCATGTCCGATTACCTCTGCTTCCTCGGGAGTACTTGGTGCAGCGGGTTGAAGAGGAAGCA  888

Query  790  TTGGTCAAGAATAGCAGTGCTTGCAAAGATTACCTCATTGAAGCAATGAAGTACCATTTGCTGCCAACAGAGCA  863
            |||||.|||||.||||||||.|||||||||||||||||||||||.|||||||||||..|||||||.||||||||
Sbjct  889  TTGGTGAAGAACAGCAGTGCGTGCAAAGATTACCTCATTGAAGCCATGAAGTACCACCTGCTGCCGACAGAGCA  962

Query  864  GCGTATATTAATGAAGAGTGTCCGGACCCGGCTGAGGACACCCATGAACCTTCCCAAATTGATGGTGGTGGTTG  937
            |||.||.|||||||||||.||.||||||||.||||||||.||||||||||||||||||||||||||||||||.|
Sbjct  963  GCGCATGTTAATGAAGAGCGTGCGGACCCGCCTGAGGACGCCCATGAACCTTCCCAAATTGATGGTGGTGGTCG  1036

Query  938  GGGGCCAAGCACCAAAGGCTATCCGGAGTGTGGAATGCTATGACTTTAAAGAAGAAAGGTGGCACCAAGTAGCA  1011
            |||||||.|||||||||||||||||.||||||||||||||.|||||.|||||||||.||||||||||.||.|||
Sbjct 1037  GGGGCCAGGCACCAAAGGCTATCCGAAGTGTGGAATGCTACGACTTCAAAGAAGAACGGTGGCACCAGGTGGCA  1110

Query 1012  GAGTTGCCTTCCGGGAGGTGCAGGGCAGGCATGGTCTACATGGCTGGACTTGTTTTTGCTGTTGGTGGCTTTAA  1085
            |||.||||||||.||||||||||||||||.||||||||.||||||||.||.||.|||||||||||||||||.||
Sbjct 1111  GAGCTGCCTTCCAGGAGGTGCAGGGCAGGGATGGTCTATATGGCTGGGCTGGTCTTTGCTGTTGGTGGCTTCAA  1184

Query 1086  TGGCTCATTAAGAGTTCGCACTGTAGATTCCTACGACCCTGTGAAGGACCAGTGGACCAGCGTTGCTAACATGA  1159
            |||||||.|||||||||||||||||||||||||.|||||.|||||.|||||||||||||||||.||.||||||.
Sbjct 1185  TGGCTCACTAAGAGTTCGCACTGTAGATTCCTATGACCCCGTGAAAGACCAGTGGACCAGCGTGGCGAACATGC  1258

Query 1160  GAGACCGGAGAAGCACTTTGGGAGCTGCTGTGTTAAATGGATTATTATACGCTGTGGGAGGCTTTGATGGGAGT  1233
            |||||||.||||||||..|.|||||.||.|||.|.|||||..|..|.|||||.|||||.||||||||.||.||.
Sbjct 1259  GAGACCGAAGAAGCACACTTGGAGCCGCGGTGCTGAATGGGCTGCTGTACGCCGTGGGGGGCTTTGACGGCAGC  1332

Query 1234  ACAGGTTTGTCATCTGTGGAAGCATACAACATAAAGTCTAATGAGTGGTTTCATGTAGCTCCCATGAATACAAG  1307
            ||||||.|.||.|||||||||||||||||||||||.||||||||||||||||||||.||.||.|||||.||.||
Sbjct 1333  ACAGGTCTATCGTCTGTGGAAGCATACAACATAAAATCTAATGAGTGGTTTCATGTCGCCCCAATGAACACGAG  1406

Query 1308  GAGGAGCAGTGTTGGTGTGGGTGTTGTTGGAGGTTTGCTCTATGCTGTAGGAGGTTATGATGGAGCATCACGTC  1381
            ||||||||||||.|||||.||.|||||||||||||||||||||||.||.||.|||||.|||||||||||.||.|
Sbjct 1407  GAGGAGCAGTGTGGGTGTTGGCGTTGTTGGAGGTTTGCTCTATGCCGTGGGGGGTTACGATGGAGCATCGCGCC  1480

Query 1382  AGTGTCTTAGCACAGTAGAATGCTATAATGCTACAACAAATGAGTGGACCTATATAGCAGAAATGAGCACCAGG  1455
            ||||||||||||||||||||||||||||||||||..||||.||||||||.||.||||||||||||||||||||.
Sbjct 1481  AGTGTCTTAGCACAGTAGAATGCTATAATGCTACTGCAAACGAGTGGACTTACATAGCAGAAATGAGCACCAGA  1554

Query 1456  CGGAGTGGAGCAGGTGTTGGTGTGTTAAACAATTTATTGTATGCTGTAGGAGGTCATGATGGCCCTTTAGTACG  1529
            |||||.||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||.|||||||||||
Sbjct 1555  CGGAGCGGAGCAGGTGTTGGTGTGTTAAACAACTTATTATATGCTGTAGGAGGTCATGATGGTCCTTTAGTACG  1628

Query 1530  AAAAAGTGTTGAAGTATATGATCCCACCACTAACGCATGGAGACAGGTTGCAGATATGAACATGTGCAGAAGAA  1603
            |||||||||||||||||||||.||||||||.||.||.|||||||||||||||||||||||||||||||||||||
Sbjct 1629  AAAAAGTGTTGAAGTATATGACCCCACCACAAATGCCTGGAGACAGGTTGCAGATATGAACATGTGCAGAAGAA  1702

Query 1604  ATGCAGGAGTTTGTGCAGTTAATGGTCTGTTATATGTTGTTGGAGGGGATGATGGTTCCTGTAACTTGGCGTCA  1677
            |||||||.||.||||||||||||||||||||.||||||||.|||||.||||||||||||||||||||||||||.
Sbjct 1703  ATGCAGGTGTCTGTGCAGTTAATGGTCTGTTGTATGTTGTCGGAGGAGATGATGGTTCCTGTAACTTGGCGTCG  1776

Query 1678  GTAGAATATTATAACCCAACAACCGATAAATGGACAGTTGTGTCATCGTGTATGAGCACAGGGAGAAGTTATGC  1751
            |||||.|||||||||||.||.||.||||||||||||||||||||.||.|||||||||||.||||||||.||.||
Sbjct 1777  GTAGAGTATTATAACCCCACCACGGATAAATGGACAGTTGTGTCCTCTTGTATGAGCACGGGGAGAAGCTACGC  1850

Query 1752  AGGGGTCACAGTTATTGATAAACCATTA  1779
            ||||||||||||||||||||||||.|||
Sbjct 1851  AGGGGTCACAGTTATTGATAAACCGTTA  1878

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