Nucleotide Global Alignment

Description

Query:
TRCN0000467596
Subject:
XR_002959704.1
Aligned Length:
3042
Identities:
1652
Gaps:
1383

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATCTCGTTGGCTGTATCTTCAAAATGTCCAGAACCCAGCCAGTTTTCATCACCTCCACTGCGACTGTCCTCCCT  74

Query    1  --------------------------------------------ATGGAGACGCCGCCGCTGCCT------CCC  24
                                                        ||  ||..|||.||..|.|.|      |||
Sbjct   75  AAGCCACTGTCATTTTTTAGTGAATTATTGTAATATCCTGCTAAAT--AGTTGCCCCCTTTTCATCTTTGACCC  146

Query   25  G-------------------------------------------CATGCACAAAGCAGGGTCATCAGAAGCCTC  55
            |                                           ||||||||||||||||||||||||||||||
Sbjct  147  GTGTAGAGTGTTCTCAACCAGCAGCCAAAGTGGTCTTTGGAAAACATGCACAAAGCAGGGTCATCAGAAGCCTC  220

Query   56  TCGATTCAAAAGATGATAATACCGAAAAACACTGCCCAGTGACAGTGAATCCTTGGCATATGAAGAAAGCTTTC  129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  221  TCGATTCAAAAGATGATAATACCGAAAAACACTGCCCAGTGACAGTGAATCCTTGGCATATGAAGAAAGCTTTC  294

Query  130  AAAGTCATGAACGAATTAAGAAGTCAAAATTTGCTGTGCGATGTCACAATTGTGGCAGAAGACATGGAAATTTC  203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  295  AAAGTCATGAACGAATTAAGAAGTCAAAATTTGCTGTGCGATGTCACAATTGTGGCAGAAGACATGGAAATTTC  368

Query  204  TGCTCATAGAGTGGTGCTGGCCGCCTGTAGTCCTTATTTTCATGCCATGTTTACAGGTGAGATGAGTGAGAGCC  277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  369  TGCTCATAGAGTGGTGCTGGCCGCCTGTAGTCCTTATTTTCATGCCATGTTTACAGGTGAGATGAGTGAGAGCC  442

Query  278  GAGCAAAGAGAGTTAGAATAAAAGAGGTAGATGGCTGGACCCTGAGGATGCTAATTGATTATGTTTACACTGCA  351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  443  GAGCAAAGAGAGTTAGAATAAAAGAGGTAGATGGCTGGACCCTGAGGATGCTAATTGATTATGTTTACACTGCA  516

Query  352  GAAATTCAGGTTACAGAAGAAAATGTACAGGTACTTCTCCCAGCAGCTGGTCTCTTACAGTTACAGGATGTGAA  425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  517  GAAATTCAGGTTACAGAAGAAAATGTACAGGTACTTCTCCCAGCAGCTGGTCTCTTACAGTTACAGGATGTGAA  590

Query  426  GAAGACTTGTTGTGAATTTTTGGAATCCCAGCTTCACCCTGTCAACTGCTTAGGAATCCGGGCTTTTGCTGATA  499
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  591  GAAGACTTGTTGTGAATTTTTGGAATCCCAGCTTCACCCTGTCAACTGCTTAGGAATCCGGGCTTTTGCTGATA  664

Query  500  TGCATGCATGTACCGACCTTCTGAACAAGGCCAACACCTATGCAGAGCAACATTTTGCAGATGTTGTACTTAGT  573
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  665  TGCATGCATGTACCGACCTTCTGAACAAGGCCAACACCTATGCAGAGCAACATTTTGCAGATGTTGTACTTAGT  738

Query  574  GAAGAATTTCTCAATCTTGGCATCGAACAAGTGTGCAGCTTAATCTCAAGTGACAAACTTACCATTTCTTCAGA  647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  739  GAAGAATTTCTCAATCTTGGCATCGAACAAGTGTGCAGCTTAATCTCAAGTGACAAACTTACCATTTCTTCAGA  812

Query  648  AGAGAAGGTATTTGAAGCAGTAATAGCATGGGTGAACCATGACAAGGATGTGAGGCAAGAGTTTATGGCCCGAC  721
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  813  AGAGAAGGTATTTGAAGCAGTAATAGCATGGGTGAACCATGACAAGGATGTGAGGCAAGAGTTTATGGCCCGAC  886

Query  722  TGATGGAACATGTACGGTTACCTTTGCTTCCTCGGGAATATTTAGTTCAGAGGGTTGAAGAGGAAGCATTGGTC  795
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  887  TGATGGAACATGTACGGTTACCTTTGCTTCCTCGGGAATATTTAGTTCAGAGGGTTGAAGAGGAAGCATTGGTC  960

Query  796  AAGAATAGCAGTGCTTGCAAAGATTACCTCATTGAAGCAATGAAGTACCATTTGCTGCCAACAGAGCAGCGTAT  869
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  961  AAGAATAGCAGTGCTTGCAAAGATTACCTCATTGAAGCAATGAAGTACCATTTGCTGCCAACAGAGCAGCGTAT  1034

Query  870  ATTAATGAAGAGTGTCCGGACCCGGCTGAGGACACCCATGAACCTTCCCAAATTGATGGTGGTGGTTGGGGGCC  943
            ||||||||||||||||||||||||||||||||||||||||||||||||||||                      
Sbjct 1035  ATTAATGAAGAGTGTCCGGACCCGGCTGAGGACACCCATGAACCTTCCCAAA----------------------  1086

Query  944  AAGCACCAAAGGCTATCCGGAGTGTGGAATGCTATGACTTTAAAGAAGAAAGGTGGCACCAAGTAGCAGAGTTG  1017
                                                                                      
Sbjct 1087  --------------------------------------------------------------------------  1086

Query 1018  CCTTCCGGGAGGTGCAGGGCAGGCATGGTCTACATGGCTGGACTTGTTTTTGCTGTTGGTGGCTTTAATGGCTC  1091
                                  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1087  ----------------------GCATGGTCTACATGGCTGGACTTGTTTTTGCTGTTGGTGGCTTTAATGGCTC  1138

Query 1092  ATTAAGAGTTCGCACTGTAGATTCCTACGACCCTGTGAAGGACCAGTGGACCAGCGTTGCTAACATGAGAGACC  1165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1139  ATTAAGAGTTCGCACTGTAGATTCCTACGACCCTGTGAAGGACCAGTGGACCAGCGTTGCTAACATGAGAGACC  1212

Query 1166  GGAGAAGCACTTTGGGAGCTGCTGTGTTAAATGGATTATTATACGCTGTGGGAGGCTTTGATGGGAGTACAGGT  1239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1213  GGAGAAGCACTTTGGGAGCTGCTGTGTTAAATGGATTATTATACGCTGTGGGAGGCTTTGATGGGAGTACAGGT  1286

Query 1240  TTGTCATCTGTGGAAGCATACAACATAAAGTCTAATGAGTGGTTTCATGTAGCTCCCATGAATACAAGGAGGAG  1313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1287  TTGTCATCTGTGGAAGCATACAACATAAAGTCTAATGAGTGGTTTCATGTAGCTCCCATGAATACAAGGAGGAG  1360

Query 1314  CAGTGTTGGTGTGGGTGTTGTTGGAGGTTTGCTCTATGCTGTAGGAGGTTATGATGGAGCATCACGTCAGTGTC  1387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1361  CAGTGTTGGTGTGGGTGTTGTTGGAGGTTTGCTCTATGCTGTAGGAGGTTATGATGGAGCATCACGTCAGTGTC  1434

Query 1388  TTAGCACAGTAGAATGCTATAATGCTACAACAAATGAGTGGACCTATATAGCAGAAATGAGCACCAGGCGGAGT  1461
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1435  TTAGCACAGTAGAATGCTATAATGCTACAACAAATGAGTGGACCTATATAGCAGAAATGAGCACCAGGCGGAGT  1508

Query 1462  GGAGCAGGTGTTGGTGTGTTAAACAATTTATTGTATGCTGTAGGAGGTCATGATGGCCCTTTAGTACGAAAAAG  1535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1509  GGAGCAGGTGTTGGTGTGTTAAACAATTTATTGTATGCTGTAGGAGGTCATGATGGCCCTTTAGTACGAAAAAG  1582

Query 1536  TGTTGAAGTATATGATCCCACCACTAACGCATGGAGACAGGTTGCAGATATGAACATGTGCAGAAGAAATGCAG  1609
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1583  TGTTGAAGTATATGATCCCACCACTAACGCATGGAGACAGGTTGCAGATATGAACATGTGCAGAAGAAATGCAG  1656

Query 1610  GAGTTTGTGCAGTTAATGGTCTGTTATATGTTGTTGGAGGGGATGATGGTTCCTGTAACTTGGCGTCAGTAGAA  1683
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1657  GAGTTTGTGCAGTTAATGGTCTGTTATATGTTGTTGGAGGGGATGATGGTTCCTGTAACTTGGCGTCAGTAGAA  1730

Query 1684  TATTATAACCCAACAACCGATAAATGGACAGTTGTGTCATCGTGTATGAGCACAGGGAGAAGTTATGCAGGGGT  1757
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1731  TATTATAACCCAACAACCGATAAATGGACAGTTGTGTCATCGTGTATGAGCACAGGGAGAAGTTATGCAGGGGT  1804

Query 1758  CACAGTTATTGATAAACCATTA----------------------------------------------------  1779
            ||||||||||||||||||||||                                                    
Sbjct 1805  CACAGTTATTGATAAACCATTATGAGCCTGAAGGACATTTTCAGCATATTTATACATGAGAAACAGCCTTCAAC  1878

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 1879  AAGTATTTGTGAAGTGACTGAGAATCTAGCACTTCTCCACTTGTAGCTGCACTTTAAGTCTCAGCAGAAGATAC  1952

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 1953  GATCGTCTGCCTTTATAGGCCTCAGATACTGAAGATTATTTTTGGTAGAAGCACCGTGTAGGCTTTTTCTGCAA  2026

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2027  TGAGCAGCAGCTGACTGAATTTTCATAAGAAACTTGGACTGCAGGACTTAATCTGTAGTCTTTAGACAACAGTT  2100

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2101  GCTTTCATAAAGACTAGTTCTTATCAACCTTGAATGACTACAGATTATTTTGTGAAGGAGGATGAAGTAATGTG  2174

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2175  TGTTCTTGTAAAATTAAATTTTATCTTTATTTCTTCTAAAAATCTGTATACCAGGAACTGAAAATCTTTGAACA  2248

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2249  GATATTAAAATCTACGTAAGTATACAAACTAGTTGAGGGATACACTGTTTGCTTTTATAAAATAACTTTGATTA  2322

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2323  CATGAATATAATAAATTATGTGCATATAAATGTGTGTCTATATGCTTTCCTTTAAATATGTTTGAAAAGATGTT  2396

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2397  TGAAACTTGATTATACTATTTATAATTGGCACAGTACTTTGAATTATGCCAGTACTACATTGTAAAACAGAGTT  2470

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2471  GTATTTTTTGATATTTAACAATGCTTAACACTTTAAATGCCACTTCTGAGGAATGGACCTGGTGTAACACACTT  2544

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2545  GAATATGTGTGATGCCAAACTTTTTAAAATACAATATAAATTATGCTTATTTATTATTTTCTTTAGTTTAATCT  2618

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2619  TGGTCATGTTTTGGTGTGTATTTTTAATTTTTTTCTTAAATTAACACTTTGGCATGAACATTACTGCAGGTTTT  2692

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2693  TGATGAATATAATGAATGTATGGAATTCAATTGAATTTGCATGGTCTTCGGAATTTTTTCTGTGTGTATAAATT  2766

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2767  TAGCTGCTATTAACAGAAGAGAGAACTTTCTGTGAGTAGCCATGTGTGTTGATCAGATACAGTTTTTCTGAGAT  2840

Query 1780  --------------------------------------------------------------------------  1779
                                                                                      
Sbjct 2841  CTTCAATTAATCTCACTTTAAAAATGACCAAAACATGTCTTTCTTGAATTAACTTTGAATAAAAGTTTGTATAT  2914

Query 1780  --------  1779
                    
Sbjct 2915  TATTTGTT  2922

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