Nucleotide Global Alignment
Description
- Query:
- TRCN0000467678
- Subject:
- NR_001278.1
- Aligned Length:
- 3000
- Identities:
- 172
- Gaps:
- 2802
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGGAACCATGGAGCTCAGCGTCCTCCTCTTCCTTGCACTCCTCACAGGCCTCTTGCTACTCCTGGTTCAGCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CACCCTAACTCCCATGGCACCCTCCCACCAGGGCCCCGCCCTCTGCCCCTTTTGGGGAACCTTCTGCAGATGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGAAGAGGCCTACTCAAATCCTTTCTGAGGTTCCGAGAGAAATATGGGGACGTCTTCACGGTACACCTGGGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGAGGCCCGTGGTCATGCTGTGTGGAGTAGAGGCCATACGGGAGGCCCTGGTGGACAACGCTGAGGCCTTCTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCCGGGGAAAAATCGTCATCATGGACCCAGTCTACCAGGGATATGGCATGCTCTTTGCCAATGGAAACCGCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAGGTGCTTCGGCGATTCTCTGTGACCACCATGAGGGACTTCGGGATGGGAAAGCGGAGTGTGGAGGAGCGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCAGGACGAGGCTCAGTGTCTGATAGAGGAACTTCGGAAATCCAAGGGAGCCCTCGTGGACCCCACCTTCCTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTCCATTCCATTACCGCCAACATCATCTGCTCCATCATCTTTGGAAAACGCTTCCACTACCAAGATCAAGAGTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCTGAAGACGCTGAACTTGTTCTGCCAGAGTTTCTTACTCATCAGCTCTATATCCAGCCAGCTGTTTGAGCTCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTCTGGCTTCTTGAAATACTTTCCTGGGGCACACAGGCAAGTTTACAAAAACCTACAGGAAATCAATGCTTAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATTGGCCACAGTGTGGAGAAGCACCGTGAAACCCTGGACCCCAGCGCCCCCAGGGACCTCATCGACACCTACCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTCCACATGGAAAAAGAGAAATCCAACCCACACAGTGAATTCAGCCACCAGAACCTCATCATCAACACGCTCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGCTCTTCTTTGCTGGCACTGAGACCACCAGCACCACTCTCCGCTACGGCTTCCTGCTCATGCTCAAATACCCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CATGTCGCAGAGAGAGTCTACAAGGAGATTGAACAGGTGGTTGGCCCACATCGCCCTCCAGCGCTTGATGACCG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGCCAAAATGCCATACACAGAGGCAGTCATCCGTGAGATTCAGAGATTTGCTGACCTTCTCCCCATGGGTGTGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCACATTGTCACCCAACACACCAGCTTCTGAGGGTACACCATCCCCAAGGACACGGAAGTATTTCTCATCCTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGCACTGCTCTCCGTGACCCACACTACTTTGAAAAACCAGACGCCTTCAATCCTGACCACTTTCTGGATGCCAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGGGCACTGAAAAAGAATGAAGCTTTTATCCCCTTCTCCTTAGGGAAGCGGATTTGTCTTGGTGAAGGCATTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCCGTGCGGAATTGTTCCTCTTCTTCACCACCATCCTCCAGAACTTCTCCGTGGCCAGCCCCGTGGCTCCTGAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GACATCGATCTGACACCCCAGGAGTGTGGTGTGGGCAAAATACCCCCAACATACCAGATCTGCTTCCTGCCCCG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTGAAGGGGCTGAGGGAAGGGGGTCAAAGGATTCCAGGGTCATTCAGTGTCCCCACCTCTGTAGATAATGGCTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGACTCCCTGCAACTTCCTGCCTCTGAGAGACCTGCTGCAAGCCAGCTTCCTTCCCTTCCATGGCACCAGTTGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGAGGTCGCAGTGCAAATGAGTGGAGGAGTGAGATTATTGAAAATTATAATATACAAAATTATATATATATAT 1702
Query 1 ------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCC 68
|..|||||||||||.||..||||||||||||||||||||||||||||.||||||||||||||||..||
Sbjct 1703 TTTGAGACAGAGTCTCACTCAGTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCACC 1776
Query 69 TCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGG 142
.||.|||||||||.||||||||..||||||||||||.|||||||||||||||||..||||||.|||||.|||||
Sbjct 1777 CCCGGGGTTCAAGAAATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGATTACAGGTGTGTGCTACCATGCCTGG 1850
Query 143 GTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT------------------ 198
.|||||||||.|||||||||.||||.||.||||||||.|||||||||||.||.|||
Sbjct 1851 CTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTGGCCAGGCTGATCTCAAACTCCTGAACTCAAG 1924
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1925 TGATTCACCCACCTTAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGTCACCATGCCCGGCCATGTATATATA 1998
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1999 TAATTTTAAAAATTAAGATGAAATTCACATAAAATAAAATTAGCCATTTTAAAGTGTACAATTTAGTGGTGTGT 2072
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2073 GGTTCATTCACAAAGCTGTACAACCACCACCATCTAGTTCCAAACATTTTCTTTTTTTCTGAGACGGAGTCTCA 2146
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2147 CTCTGTCACCCAGGTTCGAGTTCAGTGGTCTTGAACTCCTGATGTCAGGTGATTCTCCTAGTTCCAAATGTTTT 2220
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2221 CATTATCTCCCCCCAACAAAACCCATACCTATCAAGCTGTCACTCCCCATACCCCATTCTCTTTTTCATCTCAG 2294
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2295 CCCCTGTCAATCTGGTTTTTGTCCTTATGGACTTACCAATTCTGAATATTTCCTATAAACAGAATCACACAATA 2368
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2369 TTTGATTTTTTTTTTAAAACTAAGCCTTGCTCTGTCTCCCAGGCTGGAGTGCTGTGGCGTGATTTTGGTTCACT 2442
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2443 GCAACCTCCGCCTTCCAAGTTCAAGAGATTCTCCTGCCTCAGCTTCCAAGTAGCTGGGATTACAGGCATGTGGT 2516
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2517 ACCACGCCTGGCTAATTTTCTTGTATTTTTAGTAGGGACATGTTGGCCAGGCTGGTTGTGAGCTCCTGGCCTCA 2590
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2591 GGTGATCCACACGCCTCAGTGTCCCAGAGTGCTGATATTACAGGCGTAATATGTGATCTTTTGTGTCTGGTTCC 2664
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2665 TTTCACGTTGAACGCTATTTTTGAGGTTCGTGCCTGTTGTAGACCACAGTCACACACTGCTGTAGTCTTCCCCC 2738
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2739 ATCCTCATTCCCAGCTGCCTCCTCCTACTGTTTCCCTCTATCAAAAAGCCTCCTTGGCGCAGGTTCCCTGAGCT 2812
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2813 GTGGGATTCTGCACTGGTGCTTTGGATTCCCTGATATGTTCCTTCAAATCCACTGAGAATTAAATAAACATCGC 2886
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2887 TAAAGCATGACCTCCCCACGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2960
Query 199 ---------------------------------------- 198
Sbjct 2961 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3000
