Nucleotide Global Alignment

Description

Query:
TRCN0000467678
Subject:
NR_038888.1
Aligned Length:
3110
Identities:
171
Gaps:
2914

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAATTGCTCCAGATCCTAGAAAATAAAAGCAGGAAAGGAAAGGTTGGCTGAACAGGGAAGGAAAATATGTCAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AACAAAAGACAAATGATTATCTCAGGAAAAGTTCCTGCCCCTCTAAACTCTGTGCTGGGCAGCCACACGTGCCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTGGGAAAGTGCTGTGTCCTTGGAGTGCCCTGCACGCTGCAACTGAAGCCAACAAGACACGGCCCAGACAGGGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCAGGTTCTGCTAACAGTGGGGAGGGGACATCTGGCAGCATCTCTCCCAAGCAGCAACGGTAGCAGTGGTGGCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GCAACAGCAGCAGCAGCTGGGGAGTGTCCCTCCAACTTCAGAGTGAGCAGCAGCAGCTGACCAGATTGGAGGAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATTTCCACTGTCTTCCCTGGCAGCTGTGATGTGTTGTGCGGTGGCAGCTGAGGATTGCCTGCGTGTAATCTTTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGGTTCCAAGATGCTTGTTGGAAGTGGAGCCTGGTCAAGCAGCAGAAAGGACAGCTGGATCCATGCTGGGTGGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GTGAGGTGGGGTGCTTGTCAGGGAAGTTGGCTTCAGCTGGAACTGGAGGTTGGCTCCAGCAAAGGAGGTTGAAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATCACTGATTCCTGACCTGCAGCACCCAAATGGCCACAAAGAGATGTCATGGGTTTTGAGGAGGCCACAGAGCC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AACAGCTTTAGTGTCTTCAGAAGGATGAAGAAAACTTGAACAACATTTTAAAATAGCTTGAGATATAATTCACA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCCCAGAGAGTGCATCCATCTAAAGGGTACAATTCAATGGATTTTAGTATATTTACGGAGCTGTGCATTCATCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTACAATTAATTATAGAACTTCTTCATTTACTCAAAATACCCCAGCACCCCTTAGCTATCACCCTGATTCCTCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATCTCCCCCAGCCCTAGGCAACCATTAATCTTTTTTGTATCCATAGATTTGTCTATCCTAGACATTTCATATAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ATGGAATCATGCAATATACGACCCTTCTTTCACTTTGTGTAATGCTGTCAAGGTACATCCACGTGATATCAGTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCTCATTCTTTTTATGGCCAAATCACATTCCATTGTATGGATATATTACATTTTATTTATCTGTTCATCAGTTG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTGGACATTTGGGTTGGTTTCCATGTTTTTGGCTGTTAGGAATGATGTCCCCATGAACATTCATGTACAAGTTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TTGTGTGGACATGTGTTTTCATTTCTCTTGGACATATGCCTAGGAGTGGAATTGAGTCACATGGTAACTTTATA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACCATTTGAGGAACTTCCAGACTGTTTTTCAAAGTGGCTACACCATTGTACATCCCCACCAGCAATGTACAAGG  1332

Query    1  -----------------------------------------------------------ATGGAGTCTCACTCT  15
                                                                       |..||||||||||||
Sbjct 1333  GTTCCAGTTTCTCCACATTTTTTTCAACTTTTTTTTTAATCATTTGACTTTTTTTTGAGACAGAGTCTCACTCT  1406

Query   16  GTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTC  89
            ||| .|||||||||||||||||||||||||||..|||||||||||||||.|||||||||||||||||.||||||
Sbjct 1407  GTC-GCCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTC  1479

Query   90  CCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCAT-ACCTGGGTAATTTTTGCATTTTTAGT  162
            |..|||||||||||||||||||||.||.|.|||...|.||||||||| ||| .|.||||.||||.|||||||||
Sbjct 1480  CTGCCTCAGCCTCCCAAGTAGCTGAGACTCCAGGTATATGCCACCATGACC-AGCTAATGTTTGTATTTTTAGT  1552

Query  163  GGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT--------------------------------------  198
            .||||.||.|||||||||||||||.||||.||||||                                      
Sbjct 1553  AGAGACGGGGTTTCACCATGTTGGTCAGGATGGTCTTGATCTCTTGACCTCATGATCCACCTGCCTCAGCCTCC  1626

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1627  CAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCCGGCCTCATCTGACTTTTTAATTAAAGCTACCCTAGCA  1700

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1701  GACATGAAGTGATATCTCATTATGGTTTTGATTTGTATTTCTCCCATGGCTAATAATATTCAGGACCTCTTTAT  1774

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1775  GTGCTTATTGGCCATTTGTATATCTTTTTTAAAGAAATATCTATTCAGATCCTTTGCTTATTTTTGAATTGGGC  1848

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1849  TATTTGTCTTTTTATTCTTGAGTTGTAATTGTTCTTTATATATTCTAGATACAAGCAACTTATTATGTTTATAG  1922

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1923  TTTGCAAACAATTTTTTCCCATTCTTTGGGTTGTCTTTTCACTGTTTTGATAGTGTCTTTTGAAGCCCCAAAGT  1996

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1997  TTTTTATTCTGATGGCTGGTTTATCTGTTTTTTTCTTTAGTTGCTCATGCTTTTGGTGTCAATCTAAGAATGCA  2070

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2071  GTGCCAAATCCAGGGTCATAAGGATTTATCACTATGTTTTCTTCTGTGACTTTTATGATTTTAGTTCTTCTTTA  2144

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2145  TAGGTCATTGATCCATTTTGAGTTAGTTTTTTTATACAGTGTGAAATATGGATCCAACTTCATTCTTTTGCATG  2218

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2219  TGGAAATTCAGGTGTCCCCACATCATTTGCTGAGGGGACTATTCTTTTTCCATTGAAAGAAGTTGGCACTCTTG  2292

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2293  CTCAAAATCAACTGGCCATAGATATGTGGGTTAATTTCTGGGCTCTCAGTTCCATTCTGTTGATGTATAGATCT  2366

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2367  GTCCTTATGCCCATACCACACTGTTTTGATTACTGTCATTTTATAGCAGGTTTTAAAATTGGGTAGCATAAATT  2440

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2441  ATCCAACTTTTTCAAGATTTCTTTAGCTATTTGTGTTTTCTTGCATTTTCATATGCATTTTAAAAGCAACTTGT  2514

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2515  CCATTGCTGAAGTCGAAATTTTGATAGGGATTGCATTGAATTTGGAATCTGGGAGTATTGCTATCTTAATAATG  2588

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2589  TTAAGTTTTTCAATCTATAAACATGGGATGTCTTTCCACTCATTTAGATCTTCTTTAGTTTTCAACAATATTTT  2662

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2663  GTAGTTTTCAGAGCATAAGTTTTGTACTTCTTTTGTTAAATATGTTCATAAGTATCTTTCTGATGCTAATATAA  2736

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2737  ATGAGTTTTTTTTTAAGACAAAGTTTTGCTCTGTCACCAAGGCTGGAGTGCAGCGGTGTGATCTCAGCTCATTG  2810

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2811  CAACCTCTGCCTAACGGGTTCAAGTGATTCCCCTGCCTCAGTCTACTGCGTAGCTGGGATTACAGGTGCCCACG  2884

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2885  ACCACACCCAGCTAATTTTTTGTATTTTTAGTAGAGACAAGGTTTCACCATATCGGCCAGGCTGGTCTTGAACT  2958

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2959  CCTGACCTCAAGTGGTCCACCTGCCTCGGCCTCCCAAAGTGCTGAGATTACAGGCTTGAACCACTGTACCCAGA  3032

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3033  CTGGAATTGTTTTCTTAACTTCATTTTTTATTTGCTCATAACTACTGTATAGAAATAAACTGATTTTTGTACAC  3106

Query  199  --  198
              
Sbjct 3107  TG  3108

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