Nucleotide Global Alignment
Description
- Query:
- TRCN0000467678
- Subject:
- NR_103504.2
- Aligned Length:
- 6066
- Identities:
- 170
- Gaps:
- 5875
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAACCCTCAGGGACCTGGTATAGACGCAGAATCTGTTTCACACAACAACTGCTATTTGAAGGAAAAAAAAAAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAAGCAAATGATACCAAGACAAGCTCATAACAGAGATCCAATCAGCAGATGTGTACGGATGAAAATACAGTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATGAGTCAGAAACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACACTTCAGCATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTGCTGCCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGATAGTGGATCGGAAATACAGCATCTGTAAGAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCTGCTTCTACCAGAAGAAAGAGGAGGACTGGATCTGCTGCGCCTGCCAGAAGACCAGAACCAGCCGCCGTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAAGTCCCCTCAGAGGCCCAAGCAACAGCCAGCTGCGCCCCCCGCGGTGGTCAGAGCGCCAGCCAAGCCACGGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCCTCCGAGGTCTGAGCGTCAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGGTCCCCTCCGAGGTCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGCGTCAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGTCCCCGCCCAGAGGTCCGACCACCGCCAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAAGCAGCGTCCCCCTCAGAAGTCCAAGCAACAGCCGCGCAGCAGCCCCCTCAGAGGGCCAGGCGCCAGCCGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGGGGTCCCCCGTCAAAGCTTCTAGGTTCTGATTGAAAAGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCTTCACAACCCATCTACCCCTGGATGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGTTATCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGACCTCTATAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTGCCACTGAGAGATCTGCTGTCAGTCTGCTTATCCTTCCACGGACTCAAGTTTCTTCAATCTGAAGATACATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCTTTCTCCAGGGACATGTGGAAAAAAAAAAGATGTTATACAACCATCAAAGTGGCAAAAATAAAAAAAATCAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTATTGGCAAAGATGTGGGGAAAATTCTCATAAGCTACTGATGAGAATTTATAAATTATTATGACACCTTTGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAACCTGTGATCAAGCAATAATAATTTTAGGCACCCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCTAGAGAAAACTTGAATTCATAGAAAAAGTAGGTACACGTAAATCTGTTCAAGGAATCATTGTTTGGCATTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAAATAGGAGAGAGATCATGAGAAATTACCAAAATGTCCACCAATAGAATGAGTGAATCACCTGTGGTATATTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATAAATAAAAATATTAAATAGAAGGTAAAACAAATCAGACATACACACATTAGATAGATAAATTTAGAGGACAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AATAAGGAACATGAAAAGCAAATAGTAGATGGCAAATGTAATATAATATACTATGCATAAATTTTAACAACACA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAATATTATATTGCATATTGCCCAATAAGCAGAAGCCATAAGGTCTCACACTTTTCTTATAATGCAATAGAATA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAAATGACAACAAAGTAAAAGGGTATCCCAAAAATAAAACTATCCTTTTGGAAAAAAAAAGATTTAAAATAATT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTGGTTTGAAGAAATAACAAATTAAAAGCTATATATAAACGGTTAACAATATTAGGTGGACATATTTGTTTGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGAGATAGGTGAAAGATAGTTGAAAAGCCTGGGGGTATATTCAAGGTTATATGTCTTAGAAAACAAAAATACTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTTTGGGTTCAGTTTTGGATCTGGGCTTGTTCTTGTGGCTTCTGATGATTTCTGACTTGGGGAAAAATGGGGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAGTTGAAATACGTCCTTCCACCCAAACCTTTGTTTAGTAATAGGTAGGAAAATGAAGAAGAAAATAGAATGTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCAGAATGTGGAGGGATGTAAAATGGACAGTACTAGGGTAGAGGGGAAGTCAGATTAGAGGAAAGAAAGAGCAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAGGAACAGTCTTGTGCTAGGAGCTGGTGTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCTGTGTCCTTGAGTGGGCACAACCATTCCTAGCCAAGTTTAAGAGGCAAGTAAAAATATAGGGGCAATGTCAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATGAAGTCTTGTTCAGGGTATGGGGCTAGGATGAGAGAGAATGCCACAGAGTATGAAGGAAGAGTGATAGATCC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGATGAGATACAGCTCAGAGTGCCACGCCCCCAGAAAGAGGAATCAGGCAAGTACTGTCCCAAGGCAGCTGGAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GGTGAGGGCTGAGTGCCCTGGCTTCCTCACTTGGGGAGACCATGGGTCTCTGTAGAAATTCCAATATAAAGGCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGGAAATTTGACTGCATGGAGTCTTCAGGTAGAAATGTTTCTCTTGCCTAAATTCAGGTGCTAAATAAACAACA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAATGGTAACCTCTACTATGAAGTGTTTCCAATGATGGGATATCTGAGGCCATTACATTCCTGGGAATAACATG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GTGAGGTGCAGGGTGGTGGTGGTGGTGAAACATACGACAGACCACTGTAAGTGAGAACAAATTACTGGCCCAGC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCAACCCACACCAAATAAGAAATTTAATATCCCTTTGGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGTG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CTTGCTGGGCTCTCTCTTCCACATCATCCAGAAGACACACATTTGCTATGGAATGATTGTGGAGGTGAGAGTAT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AGTGCATATTAATTCATGCAAAAAGTTAGATATTAGCCCAGAAATGTTAGTAACAAGAAACTACTGAATTCTCT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTTTGTCTGTTGTGGAAATAAAACCTTCTGGGGATGAATCAAAACTATCTGACAATTACTTGAAATGGGTGAAT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGCTAAATGTAATGTGCCTTGGATATTATAACTAAAAGGTGCTATAATCCAGTTATATTTTTTATCTTTTAAGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ATTGGTTCTGAGGAGCACTACCAGTAAATATTGCAAAAATTACATAAAGCTCCAAAAGCTACTCTGTGTAAACT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCTTGAGTGGGAATTCTCAACCATAATATCTGGAATATGACTGATAATTCTGGATGTTAACTGATTTTATGTTC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGATGTTTTGACTGGTTTTGGGAAAAATTTTGGGAAAAAAGAGTTTTCCTCGTAAATACCCAACAACTGGGTCT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CTGGGTAAAAAGGCCTAATTTATAGAGATTGCTAATTTCCATGGTGTAAATATTTCCACAATGCAGATTCCTTC 3330
Query 1 ----------------------------ATGGAGTCTCACTC-TGTCACCCAGGCTGGAGTGCAGTGGCGTGAT 45
|||||||.|||||| |||.||||||.||||||||||..||.|.||.
Sbjct 3331 CTTCCTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCACTCTTGTTACCCAGACTGGAGTGCAAAGGTGCGAC 3404
Query 46 CTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTA 119
|||||||||||||||.||...|||||.||||||||||.|||||||..|||||||||||||||||||||||||||
Sbjct 3405 CTTGGCTCACTGCAATCTTCACCTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTA 3478
Query 120 CAGACGTGTGCC----ACCATACCTGGGTAATTTTTGCATTTTTAGTGGAG--AGGGAGTTTCACCATGTTGGC 187
||| ||||| |||||.|||||.||| |||||.|||||||||.||| ||||| ||||||||||||||
Sbjct 3479 CAG----GTGCCCACGACCATGCCTGGCTAA-TTTTGTATTTTTAGTAGAGATAGGGA--TTCACCATGTTGGC 3545
Query 188 CAGGTTGGTCT--------------------------------------------------------------- 198
||||.||||||
Sbjct 3546 CAGGCTGGTCTCAACCTCTGGACCTCAGGTGATCCACCCGCCTCGGCCTCCTAAAGTGCTGGAGATTACAGGCA 3619
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3620 TGAGCCACCACGCCCGGACCATGATGCAGATTTCAAGCTATGAACATGATTCTCTGGAGTTTACCATTTGTCTT 3693
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3694 TTAATTGGCAAATTTGATGCAGAATTGGGAAGAGAAGCACACAATTGACTCTCGTCAGCTGGCACAAGCTGGTG 3767
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3768 CCAGTGCACCACTGTATATATCCATGGCCCTCTGTGAAGCTAGAGTTTACTACTAAAATTTGTGCTCCATAAAT 3841
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3842 ATACAAAGGCACTAGTAAGAGAAAAAATATAAAGAGAATATAAACTAAATTCAAATTAGGGAGCTCAAATGGAG 3915
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3916 AAAATTGACAGATAATATTTTTGAAACTTTGAAAAGTAGTATTTGTCTAGATTCACCTTTTATTACCTTTTCCT 3989
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3990 TTTTTTCTTTTCCTTTTTTTTTTTTTTTTGAGACGGAGTTTCTCTCTTGTTACCCAGGCTGGAGTGCAATGGCA 4063
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4064 CGCAATCTCAGCTCATTGCAACCTCGGCTCACTGTAACCTTCACCTTCCGTGTTCAAATGATTCTCCTGCCTCA 4137
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4138 GCCTTCCGAGTAGCTGGGATTACAGGCACCCACCACCATGCCCAGCTAATTCTTTGTATTTTTAGTGGAGATGG 4211
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4212 GGTTTCACCATGTTGGCCAGGCTGGTCTTGAACCCCTGACCTCAGGTGATCCACCCACCTGGGCCTCCCAAAGT 4285
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4286 GCTGGGATTACAGGCATGAGCCACCGCGCCCGGCCTGTTATTATCTTTTATTAAGCAAACAGCGTATCTATGTA 4359
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4360 TCATACTGAGTGTTCTGAGCTGTTAGTTTCTTTGGTGTTCATCTAGATGGAAGCTGGGGCTTCCTTCCTTTCAG 4433
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4434 ATATTGGTGCTAACATGAAGCTGACCAAAGAATTGATGGGATCTGCACACTGTAAAGCCGGTTTCAGGATGGCT 4507
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4508 GAGCTGACGGTCAAGAAAGAAGAGAAGATATGAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTT 4581
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4582 GTGATTTGGTATGACAATATATGGCTTTTTGTGATTGTTAACATTAATGAAAACAAGAAAAATTAGTTGCTCAA 4655
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4656 AAGTTGAAAAATGGATTCATAAACTTTTTATTAGAGTAAGGCAAAAGAACATATTAAAATAGAGGTAAATTAGA 4729
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4730 AATGTCAATAAGAACCCATGGACATTTTTTATAAGGAGACTTTATCTGTTCTGTCCCTACAGTGATTTATGCTC 4803
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4804 TTGGATATTTTTGCTGTCATCCTGACAAATTCTAGTTGGAATATGGAACAAGCTTATTTGTAGACCTAGTGCCT 4877
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4878 GTGGCTTCTAAAGCAATTTTCTGAAAAGAGAAACCACTGCCTGTTGGAAGAATAGTTGATTCCATACCTCAAGC 4951
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4952 TAGGGAAAAAAAATCAGAATTAGTCTGTGAATTCTAGATGTTGAGAGAAAGCAGGGTTTCATTAGGGCATCGGA 5025
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5026 GAGTCACAAGTCCATAGGATGCAAAAAGGAAGATGAAATAAAATTGCCTGAAAAACGCACCTGAATTTCTGGCA 5099
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5100 TTGTTTACTGAAAAGGCTGTGTATTGATGAACCCCAATTATGTGAGGTCTACATTTAAGAGTTTATAATCAACA 5173
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5174 GTTTGAAAATGCAGGGTGTTGTTTCTTTCTATAAGGAGACAAAACAGTCAGAAGGGAGTGTCACAGGACATTAT 5247
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5248 CACAAAATCAAAGTTCTCCATGAAATGTGGTTCATTTGCTAGAAAATAATGCAAGCCTATTGGAGAGAATCAGG 5321
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5322 GCTTCTAGTGATGCTAGGGATGACCTTAAGCATTGTTTGTAAATCACACTTTTTCCTAGTCTTTCAGCAGCAGC 5395
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5396 TGCACAGAGTAGGCCTGCTTCTTCCCATGAAAGCCACACTGAGTTTTATCAACTAGTAGTGTGTGGGCACTATT 5469
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5470 GCAAGTTATGTTGTGTTGTTTATGGCCATTTATCCAACAGTGCTTTCCTCTGTGCGGGGCTCTGCAGCCTCGTT 5543
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5544 CTATGTTATTTTTATTACCACGTGTCTGTGCGCCTCAGGTGGCAAAGCAGAATCAGCTTCTCTACCCTCAGCAG 5617
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5618 GGCTCACTATGACTCACTATAAGGGAAGAAAATCTTACAGATGTCAGAAAATGTTAGGTAAGTGGACAGTGATA 5691
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5692 AACACAAAACAGCAAGTGGTCAGTATCAAAGAGAAAAACAGTATGTTGGTGAAGGAGAAGTATCAAAGCTAGTT 5765
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5766 AAAAAAGTAACAGGAGAAATGTAAAGGGACAATACTCCACAAAAATTTAGATTGTAACTGAGCTTCTTCTCCTA 5839
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5840 AAGAGATTTAAAAATAAAGTATAGGAAATACATGAAGAAACAAAGTAAAATGCCAAGGTGTAAGTTTGACCATG 5913
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5914 AATATCTAGGGAAAAACATACTTGCACTAAAACAACCAAATATGCAAAAATCAAGTGGAAAAACAGGTCAAAAT 5987
Query 199 ------------------------------------------------------------------------ 198
Sbjct 5988 AATGCCAGTTGATGTCTGTAAGAACTAAATGTATAATAAAATGAGCAAAAAAAATGGCCAGTTTAACACCAA 6059
