Nucleotide Global Alignment
Description
- Query:
- TRCN0000467678
- Subject:
- NR_103505.2
- Aligned Length:
- 6104
- Identities:
- 170
- Gaps:
- 5913
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAACCCTCAGGGACCTGGTATAGACGCAGAATCTGTTTCACACAACAACTGCTATTTGAAGGAAAAAAAAAAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAAGCAAATGATACCAAGACAAGCTCATAACAGAGATCCAATCAGCAGATGTGTACGGATGAAAATACAGTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATGAGTCAGAAACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACACTTCAGCATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTGCTGCCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGATAGTGGATCGGAAATACAGCATCTGTAAGAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCTGCTTCTACCAGAAGAAAGAGGAGGACTGGATCTGCTGCGCCTGCCAGAAGACCAGAACCAGCCGCCGTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAAGTCCCCTCAGAGGCCCAAGCAACAGCCAGCTGCGCCCCCCGCGGTGGTCAGAGCGCCAGCCAAGCCACGGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCCTCCGAGGTCTGAGCGTCAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGGTCCCCTCCGAGGTCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGCGTCAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGTCCCCGCCCAGAGGTCCGACCACCGCCAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAAGCAGCGTCCCCCTCAGAAGTCCAAGCAACAGCCGCGCAGCAGCCCCCTCAGAGGGCCAGGCGCCAGCCGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGGGGTCCCCCGTCAAAGCTTCTAGGTTCTGGTAACACCATCTCTTCCCTTTTGTTCCCCAGCCCTAAGATTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGACTCATTGCTTCACAACCCATCTACCCCTGGATGAAGTTATCTGGCTTCAAATATTATGCAGGGGCAAACA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTTGAAGATGTCATCCCATTGTCTTCTGACCTCTATAATTGCCACTGAGAGATCTGCTGTCAGTCTGCTTATCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTCCACGGACTCAAGTTTCTTCAATCTGAAGATACATGTCTTTCTCCAGGGACATGTGGAAAAAAAAAAGATGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TATACAACCATCAAAGTGGCAAAAATAAAAAAAATCAAGTATTGGCAAAGATGTGGGGAAAATTCTCATAAGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACTGATGAGAATTTATAAATTATTATGACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAACCTGTGATCAAGCAATAATAATTTTAGGCACCCATCCTAGAGAAAACTTGAATTCATAGAAAAAGTAGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACACGTAAATCTGTTCAAGGAATCATTGTTTGGCATTGAAAATAGGAGAGAGATCATGAGAAATTACCAAAATG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCCACCAATAGAATGAGTGAATCACCTGTGGTATATTTATAAATAAAAATATTAAATAGAAGGTAAAACAAATC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGACATACACACATTAGATAGATAAATTTAGAGGACAAAATAAGGAACATGAAAAGCAAATAGTAGATGGCAAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGTAATATAATATACTATGCATAAATTTTAACAACACACAATATTATATTGCATATTGCCCAATAAGCAGAAGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CATAAGGTCTCACACTTTTCTTATAATGCAATAGAATAAAAATGACAACAAAGTAAAAGGGTATCCCAAAAATA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAACTATCCTTTTGGAAAAAAAAAGATTTAAAATAATTCCTGGTTTGAAGAAATAACAAATTAAAAGCTATATA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TAAACGGTTAACAATATTAGGTGGACATATTTGTTTGAAGAGATAGGTGAAAGATAGTTGAAAAGCCTGGGGGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATATTCAAGGTTATATGTCTTAGAAAACAAAAATACTTGTTTGGGTTCAGTTTTGGATCTGGGCTTGTTCTTGT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGCTTCTGATGATTTCTGACTTGGGGAAAAATGGGGAAGAGTTGAAATACGTCCTTCCACCCAAACCTTTGTTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGTAATAGGTAGGAAAATGAAGAAGAAAATAGAATGTTGCAGAATGTGGAGGGATGTAAAATGGACAGTACTAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGTAGAGGGGAAGTCAGATTAGAGGAAAGAAAGAGCATCAGGAACAGTCTTGTGCTAGGAGCTGGTGTGGCCAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTCCTTGAGTGGGCACAACCATTCCTAGCCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGTTTAAGAGGCAAGTAAAAATATAGGGGCAATGTCAGATGAAGTCTTGTTCAGGGTATGGGGCTAGGATGAGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GAGAATGCCACAGAGTATGAAGGAAGAGTGATAGATCCAGATGAGATACAGCTCAGAGTGCCACGCCCCCAGAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGAGGAATCAGGCAAGTACTGTCCCAAGGCAGCTGGAGGGTGAGGGCTGAGTGCCCTGGCTTCCTCACTTGGGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGACCATGGGTCTCTGTAGAAATTCCAATATAAAGGCAGGGAAATTTGACTGCATGGAGTCTTCAGGTAGAAAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTTTCTCTTGCCTAAATTCAGGTGCTAAATAAACAACAAAATGGTAACCTCTACTATGAAGTGTTTCCAATGAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GGGATATCTGAGGCCATTACATTCCTGGGAATAACATGGTGAGGTGCAGGGTGGTGGTGGTGGTGAAACATACG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACAGACCACTGTAAGTGAGAACAAATTACTGGCCCAGCCCAACCCACACCAAATAAGAAATTTAATATCCCTTT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGTGCTTGCTGGGCTCTCTCTTCCACATCATCCAGAAGAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACACATTTGCTATGGAATGATTGTGGAGGTGAGAGTATAGTGCATATTAATTCATGCAAAAAGTTAGATATTAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CCCAGAAATGTTAGTAACAAGAAACTACTGAATTCTCTGTTTGTCTGTTGTGGAAATAAAACCTTCTGGGGATG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AATCAAAACTATCTGACAATTACTTGAAATGGGTGAATAGCTAAATGTAATGTGCCTTGGATATTATAACTAAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AGGTGCTATAATCCAGTTATATTTTTTATCTTTTAAGGATTGGTTCTGAGGAGCACTACCAGTAAATATTGCAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AAATTACATAAAGCTCCAAAAGCTACTCTGTGTAAACTTCTTGAGTGGGAATTCTCAACCATAATATCTGGAAT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 ATGACTGATAATTCTGGATGTTAACTGATTTTATGTTCTGATGTTTTGACTGGTTTTGGGAAAAATTTTGGGAA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AAAAGAGTTTTCCTCGTAAATACCCAACAACTGGGTCTCTGGGTAAAAAGGCCTAATTTATAGAGATTGCTAAT 3330
Query 1 ------------------------------------------------------------------ATGGAGTC 8
|||||||.
Sbjct 3331 TTCCATGGTGTAAATATTTCCACAATGCAGATTCCTTCCTTCCTTTTTTTTTTTTTTTTTTTTGAGATGGAGTT 3404
Query 9 TCACTC-TGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAG 81
|||||| |||.||||||.||||||||||..||.|.||.|||||||||||||||.||...|||||.|||||||||
Sbjct 3405 TCACTCTTGTTACCCAGACTGGAGTGCAAAGGTGCGACCTTGGCTCACTGCAATCTTCACCTCCCGGGTTCAAG 3478
Query 82 CAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCC----ACCATACCTGGGTAATTTTT 151
|.|||||||..|||||||||||||||||||||||||||||| ||||| |||||.|||||.||| ||||
Sbjct 3479 CCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAG----GTGCCCACGACCATGCCTGGCTAA-TTTT 3547
Query 152 GCATTTTTAGTGGAG--AGGGAGTTTCACCATGTTGGCCAGGTTGGTCT------------------------- 198
|.|||||||||.||| ||||| ||||||||||||||||||.||||||
Sbjct 3548 GTATTTTTAGTAGAGATAGGGA--TTCACCATGTTGGCCAGGCTGGTCTCAACCTCTGGACCTCAGGTGATCCA 3619
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3620 CCCGCCTCGGCCTCCTAAAGTGCTGGAGATTACAGGCATGAGCCACCACGCCCGGACCATGATGCAGATTTCAA 3693
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3694 GCTATGAACATGATTCTCTGGAGTTTACCATTTGTCTTTTAATTGGCAAATTTGATGCAGAATTGGGAAGAGAA 3767
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3768 GCACACAATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCCCTCTGTG 3841
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3842 AAGCTAGAGTTTACTACTAAAATTTGTGCTCCATAAATATACAAAGGCACTAGTAAGAGAAAAAATATAAAGAG 3915
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3916 AATATAAACTAAATTCAAATTAGGGAGCTCAAATGGAGAAAATTGACAGATAATATTTTTGAAACTTTGAAAAG 3989
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3990 TAGTATTTGTCTAGATTCACCTTTTATTACCTTTTCCTTTTTTTCTTTTCCTTTTTTTTTTTTTTTTGAGACGG 4063
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4064 AGTTTCTCTCTTGTTACCCAGGCTGGAGTGCAATGGCACGCAATCTCAGCTCATTGCAACCTCGGCTCACTGTA 4137
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4138 ACCTTCACCTTCCGTGTTCAAATGATTCTCCTGCCTCAGCCTTCCGAGTAGCTGGGATTACAGGCACCCACCAC 4211
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4212 CATGCCCAGCTAATTCTTTGTATTTTTAGTGGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACCCC 4285
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4286 TGACCTCAGGTGATCCACCCACCTGGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGCCT 4359
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4360 GTTATTATCTTTTATTAAGCAAACAGCGTATCTATGTATCATACTGAGTGTTCTGAGCTGTTAGTTTCTTTGGT 4433
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4434 GTTCATCTAGATGGAAGCTGGGGCTTCCTTCCTTTCAGATATTGGTGCTAACATGAAGCTGACCAAAGAATTGA 4507
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4508 TGGGATCTGCACACTGTAAAGCCGGTTTCAGGATGGCTGAGCTGACGGTCAAGAAAGAAGAGAAGATATGAGCC 4581
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4582 GCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTTGGTATGACAATATATGGCTTTTTGTGATT 4655
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4656 GTTAACATTAATGAAAACAAGAAAAATTAGTTGCTCAAAAGTTGAAAAATGGATTCATAAACTTTTTATTAGAG 4729
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4730 TAAGGCAAAAGAACATATTAAAATAGAGGTAAATTAGAAATGTCAATAAGAACCCATGGACATTTTTTATAAGG 4803
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4804 AGACTTTATCTGTTCTGTCCCTACAGTGATTTATGCTCTTGGATATTTTTGCTGTCATCCTGACAAATTCTAGT 4877
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4878 TGGAATATGGAACAAGCTTATTTGTAGACCTAGTGCCTGTGGCTTCTAAAGCAATTTTCTGAAAAGAGAAACCA 4951
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4952 CTGCCTGTTGGAAGAATAGTTGATTCCATACCTCAAGCTAGGGAAAAAAAATCAGAATTAGTCTGTGAATTCTA 5025
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5026 GATGTTGAGAGAAAGCAGGGTTTCATTAGGGCATCGGAGAGTCACAAGTCCATAGGATGCAAAAAGGAAGATGA 5099
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5100 AATAAAATTGCCTGAAAAACGCACCTGAATTTCTGGCATTGTTTACTGAAAAGGCTGTGTATTGATGAACCCCA 5173
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5174 ATTATGTGAGGTCTACATTTAAGAGTTTATAATCAACAGTTTGAAAATGCAGGGTGTTGTTTCTTTCTATAAGG 5247
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5248 AGACAAAACAGTCAGAAGGGAGTGTCACAGGACATTATCACAAAATCAAAGTTCTCCATGAAATGTGGTTCATT 5321
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5322 TGCTAGAAAATAATGCAAGCCTATTGGAGAGAATCAGGGCTTCTAGTGATGCTAGGGATGACCTTAAGCATTGT 5395
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5396 TTGTAAATCACACTTTTTCCTAGTCTTTCAGCAGCAGCTGCACAGAGTAGGCCTGCTTCTTCCCATGAAAGCCA 5469
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5470 CACTGAGTTTTATCAACTAGTAGTGTGTGGGCACTATTGCAAGTTATGTTGTGTTGTTTATGGCCATTTATCCA 5543
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5544 ACAGTGCTTTCCTCTGTGCGGGGCTCTGCAGCCTCGTTCTATGTTATTTTTATTACCACGTGTCTGTGCGCCTC 5617
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5618 AGGTGGCAAAGCAGAATCAGCTTCTCTACCCTCAGCAGGGCTCACTATGACTCACTATAAGGGAAGAAAATCTT 5691
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5692 ACAGATGTCAGAAAATGTTAGGTAAGTGGACAGTGATAAACACAAAACAGCAAGTGGTCAGTATCAAAGAGAAA 5765
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5766 AACAGTATGTTGGTGAAGGAGAAGTATCAAAGCTAGTTAAAAAAGTAACAGGAGAAATGTAAAGGGACAATACT 5839
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5840 CCACAAAAATTTAGATTGTAACTGAGCTTCTTCTCCTAAAGAGATTTAAAAATAAAGTATAGGAAATACATGAA 5913
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5914 GAAACAAAGTAAAATGCCAAGGTGTAAGTTTGACCATGAATATCTAGGGAAAAACATACTTGCACTAAAACAAC 5987
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5988 CAAATATGCAAAAATCAAGTGGAAAAACAGGTCAAAATAATGCCAGTTGATGTCTGTAAGAACTAAATGTATAA 6061
Query 199 ------------------------------------ 198
Sbjct 6062 TAAAATGAGCAAAAAAAATGGCCAGTTTAACACCAA 6097
