Nucleotide Global Alignment

Description

Query:
TRCN0000467678
Subject:
NR_158628.1
Aligned Length:
4880
Identities:
172
Gaps:
4682

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAATGTAGTCACTGTCCCGGAACCTGGGGCAGCGGAGTCCCGTGCGCCCTGTGGTGACAGCTCAGGAGGGTGTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCGCTCAGCAGGGGCCAGCATGGACCAGTCTGTGGCAATCCAGGAGACGCTGGCTGAGGGGGAATACTGCGTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATCGCGGTGCAAGGTGTGCTGTGTGAGGGGGACAGCCGGCAGAGCCGCCTCCTGGGACTCGTGCGCTACCGCCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGAGCACGGCGGCCAGGAACACGCTCTCTTCCTCTATACGCACCGGAGGATGGCCATTACCGGGGACGATGTCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCTGGACCAGATAGTGCCAGTCTCGCGGGATTTTACGCTGGAAGAAGTGTCCCCAGATGGTGAACTCTACATC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTTGAGACGGGGTTTCACCGTGTTGGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCACCCCACCTCGGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCACCGGGCCTAAATCAGGCTTTTCTCACAGCTCTATGAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GTTATCACTGTTTGCATCTCCATTTTATGGACAAGGCTCAGATGTGACCGTCCAGCTGGACACAGCAGAGCTTA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCCTCGTATTCCAACTGCCCTTTGGTTCACAAACCAGGATGTTCCTCCACGAAGTTGCCAGGGCCTGTCCAGGC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTCGATTCTGCGACCCGGGATCCTGAATTCCTGTGGCTGTCTCGGTATAGGTGCGCAGAGCTGGAGCTGGAGAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GCCAACGCCGCGCGGTTGTAACTCGGCCCTAGTTACCTGGCCAGGGTACGCGACAATTGGCGGAGGTGGTTCTA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACTTTGATGGTTTGAGACCAAATGGGAAGGGAGTGCCTATGGACCAAAGCTCCAGGGGTCAAGATAAACCAGAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGCTTGCAACCAAGACAGAATAAATCCAAGTCCGAAATTACTGACATGGTTCGCTCCTCCACTATCACAGTGTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGACAAGGCTCATATTTTATCCATGCAGAAGTTTGGACTGCGAGATACAATTGTGAAATCACATCTACTACAGA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAGAAGAGGATTACACCTATATCCAGAACTTCAGGTTTTTTGCGGGAACATACAATGTAAATGGGCAGTCCCCC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AAAGAATGCCTCCGGCTGTGGCTGAGCAATGGTATCCAGGCCCCAGATGTCTATTGTGTAGGGTTCCAGGAGCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGATCTGAGTAAGGAAGCTTTTTTCTTTCACGATACCCCAAAGGAGGAAGAGTGGTTCAAAGCTGTGTCAGAGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GTCTTCATCCAGATGCCAAATATGCAAAGGTGAAGCTTATCCGACTGGTTGGGATTATGCTGCTGTTATATGTC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AAACAGGAGCATGCAGCTTATATCTCAGAAGTGGAAGCCGAGACTGTGGGGACAGGAATCATGGGGAGGATGGG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CAACAAGGGAGGCGTGGCGATCAGGTTCCAGTTCCACAACACCAGCATCTGCGTTGTGAATTCTCACTTGGCAG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CCCACATTGAAGAGTATGAGAGGAGGAACCAGGACTATAAGGACATTTGTTCTCGAATGCAGTTTTGTCAGCCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GACCCAAGCCTTCCCCCTCTCACCATCAGCAACCATGATGTGATCTTGTGGCTGGGGGACCTCAACTACAGGAT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AGAAGAGCTGGATGTGGAAAAAGTGAAAAAGCTCATCGAAGAGAAGGACTTTCAAATGCTGTATGCATATGATC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGCTGAAAATTCAGGTGGCCGCAAAGACTGTCTTTGAAGGCTTCACAGAGGGTGAGCTCACATTCCAGCCTACT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TACAAGTATGATACGGGCTCTGACGACTGGGATACCAGGAGGATAAAGATCAGAGAATCAGTCTGAACTCTGTT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TTGGCTTTGAGCTTTCATGGTTGTTTTGGATGATACCCACAGGATACATGTTATCCCTTGGTGGGCCCGAATTG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CTCTTGCTGCCTCAGATGACTTAGCCACATGGACATGAAGGCCCTGATTCATCACTCCCCACCTGAGCCAGGGC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ACTCGCCAGGCAGCGGGCACTGCTGTTTCTGTGAGTACTTCCAGTGTGGACTTTGCATTTCAGTGAGAAGTGCC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GTGCTCCTGCCTGGTGTGATCGGATTCTCTGGAAAGGGAAGAACATCACTCAGCTGAGTTACCAGAGCCACATG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GCCCTGAAGACCAGTGACCACAAGCCTGTCAGCTCAGTGTTTGACATCGGGGTGAGGGTCGTAAATGACGAGCT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TTACCGGAAGACACTGGAGGAAATTGTTCGCTCCCTGGATAAGATGGAAAATGCCAACATTCCTTCTGTGTCCC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGTCCAAGCGAGAGTTCTGTTTTCAGAATGTGAAGTACATGCAATTGAAAGTAGAATCCTTTACAATTCATAAT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GGACAAGTACCCTGTCATTTTGAATTCATCAACAAGCCTGATGAAGAGTCTTACTGTAAGCAGTGGCTGAATGC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CAACCCCAGCAGAGGCTTCCTCCTGCCAGATTCTGATGTTGAGATTGACTTGGAGCTCTTCGTAAATAAGATGA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CAGCTACAAAGCTCAACTCGGGTGAAGACAAAATTGAGGACATTCTGGTTCTGCACTTGGACAGGGGAAAGGAT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TACTTTTTGTCTGTGTCTGGGAACTACCTGCCCAGCTGTTTTGGGTCTCCCATTCATACACTGTGTTACATGAG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AGAGCCAATCTTGGACCTACCACTTGAAACCATTAGTGAGCTGACTCTGATGCCAGTATGGACTGGAGATGATG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GGAGCCAGTTGGATAGCCCCATGGAAATCCCCAAAGAGCTCTGGATGATGGTTGATTACCTGTACCGAAATGCT  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  GTCCAGCAGGAAGATCTGTTTCAGCAACCAGGCCTGAGGTCAGAATTTGAACATATCAGGGACTGCTTGGATAC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TGGAATGATTGATAACCTCTCTGCCAGCAATCATTCTGTAGCCGAAGCCCTGCTGCTTTTCCTGGAGAGCCTTC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CAGAGCCTGTCATCTGTTACAGCACCTACCATAACTGCTTGGAGTGTTCTGGCAACTACACAGCAAGCAAACAG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GTCATTTCTACTCTCCCCATATTCCACAAAAATGTCTTCCACTACTTGATGGCGTTTTTGCGAGAACTGCTGAA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  AAATTCAGCAAAAAATCATTTGGATGAGAATATTCTAGCTAGCATATTTGGCAGCTTATTGCTTCGAAACCCAG  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  CTGGTCACCAAAAGCTTGATATGACAGAGAAGAAGAAGGCTCAAGAATTTATTCACCAGTTCCTCTGCAACCCA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CTCTGAGCCTCTCTCTCCTCCTATTTTACTTGAGGCTGCCAATTACCAGCCCCACCTGTTTCAGCTCAAGAGAT  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GCCTTAAGATAATTATGTGAGGCCACTTGGTAGCAAGAATGGCAGCTATTTCCTGAGCCTAGTACCCCAATTAA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  GCCCACCATTGGTTAGCACACTCAGCGCTGTGAGTCGTGAAGACACGGGAGAAAATCCACCATAATAAAACTGA  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  CATTCAATTTTCAACTTTAGTTATTTAACACAGATTTTTTTATTTTTTATTTTTTTTTATTTTGAGACGGAGTT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  TTGCTCTGTCGCGCAGGGTGGAGTGCGGTGGCACGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTGCAAGC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  AATTATCCTGCCTCAGCCTCCCGAGTAGCTGGGACTGCAGGCACACACTGCCACGCCCAGCTAATTTTTTGCAT  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  TTTAGTAGAGACGGGGTTTCACCGTGTTGCCCAGGCTGTTCTAAAACTCCTGAACTCAGGTAATCTGCCTGCCT  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  CGGCCTCCCCAAGTGCTAGGATTACAGATGTGAGCCACCACGCCCGGCCTTTTTTTTTTTTTTTTCTTTTTTGA  3848

Query    1  -ATGGAGTCTCACTC-TGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCT  72
             |||||||.|||||| |||..|||||||||||||||..|||||||.||||||||||||||||||||||||||||
Sbjct 3849  GATGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCGTTGGCGTGGTCTTGGCTCACTGCAACCTCTGCCTCCT  3922

Query   73  GGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAA  146
            .|||||||||||||||||..||||||||||.|.||||||||||||||.||.|||..||||||||.|||||.|||
Sbjct 3923  TGGTTCAAGCAATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTATAGGCGTCCGCCACCATGCCTGGCTAA  3996

Query  147  TTTT----TGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT------------------  198
            ||||    ||..||||||||..|||....||||||||||||||||||||.||||||                  
Sbjct 3997  TTTTTTTGTGTGTTTTTAGTATAGACACGGTTTCACCATGTTGGCCAGGCTGGTCTCGAATGCCTGGCCTCAGG  4070

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4071  TGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAACCACCACGCCTGGCCTAAAATGTTTT  4144

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4145  TAAATAACTGTACTTGTACTCACTCACCCTACCTCCAGGGCATAGTCAGTCTGGGCTGAGATCCCCATGATCAG  4218

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4219  ATATTTGATGGAAAGTCCTGAAAGGCCAATGAGTTGGATGGCAAGAATGCAGGCAGAAGCTGCTGGATAAAATA  4292

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4293  GGCTACAGCCACCTCAGATGCTTTCAGTGCTCTGTCTGAGGATGTGTATATGCATATGCAAACTCGACCCCCGT  4366

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4367  TCCTGCCCAGATAATGGCTCAATAACTCTGAGGCTGGTTGCTCAGCCTCTGAGGGCAATACAGGCATTTAAAAA  4440

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4441  ATTAAAATGACCAGGCACAGTGGCTCACGCCTGTAATCTCGGCACTTTGGGAGACTGAGGTGGGAGCATCACTT  4514

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4515  GAGACCAGGAGTTTGGGACCAGGCTGGGCAACACAGGGAGACCCCCTCTCTACAAAAACATTTTTAAAAAATTA  4588

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4589  GCTGGGTGTGGTGATGCATGCCTGTGGTCCCAGTTACTTGGGAGGCTGACGTGGGTGGCTCACTTGAGCACAGG  4662

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4663  AGTTTGAGGCTGCAGTGACCTATGACCACATCACTGTACGCCAGCCCGGGTGAGAGAGGGAGACCCCGTCTCTA  4736

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4737  AAAATAAAATGTAAAATCACTGAAAAAATGAGTGTTCGGTGAAACAAGTGGGATTTTCTGGGCCAGCAAGTCTT  4810

Query  199  ----------------------------------------------------------------------  198
                                                                                  
Sbjct 4811  CCAAACTGTATATGATGCATCCTGTCTCCATGTGTAATATATTTTAATGATAAATGTATTTTTAACAGTG  4880

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