Nucleotide Global Alignment
Description
- Query:
- TRCN0000467678
- Subject:
- XR_001737529.2
- Aligned Length:
- 4592
- Identities:
- 173
- Gaps:
- 4394
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGAAGGAAGAGGAAGAGGGTCTGGGCGATGGTGCATCCGGGACGAGCCTCCAGAGACCAAGCGGGATAGGTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACCCGCCGCGCAGCTGGCGGGACGCTGGGCCAACGAGGTCTGGGGTCTTGGCGCGGAGTTCATGGGCCGCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAGGCTTGTGCCAGTGGCTTTGGATCCCTGGCCTGCTTCCCCCAACCCAGCCTCCAGACCAGCGCTGGCCTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCACACACTCCGCAGCACCGTCCCGGGAACCGAGCGTCGGCGGGGAGGCCGCCTCTCCGCAATACCCCATGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCCCATCACTCGAGGAGTCTGGGCAGAGACTGGACTACACCGTGGGAGAATCTGCAAAGGTGTTGCTGGAACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GACATATTTCTAGTTGTATGAGGTGGCCTGGACATTACTCTCGAGCTCCTTACCCATACTTCAGTAGTAGGCAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTTCACTAAATTGGAGACCACCCTGTTTGTTTGAGTCTAGAACTCAGTTCCAGTACTGTAACTGGAGACCTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAACCTGAGCCAGACATCTTTGATTCATCTCTCTAGTTACGTCATGAACGCTGAGGGAGATGAGCCTTCATCAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACGAAGAAAACACCAAGGTGTGATAAAGCGGAATTGGGAATATATATGTAGCCATGATAAAGAAAAAACGAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATCCTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACAAGTTTGACTTTTCAGTGATGTCCTA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATGCG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGATAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TAAGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATTATGAAGGACTTCCCATAGGAAAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACAGCTGAAAAATTGTCTTCAAATTTACAGCACCATTTCAGTTTGTCATCTGTTTATTCACATTACTTTCCTGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACTGGAATTCCAGAAGTGACCACCTGTCATTCCCGAAGTGCCATAACTGTGGATTATATTTTCTACTCTGCAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAAAGGAAGATGTTGCTGGGCACCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCACTTCTTACAGAACAAGACTTATGGACTGTTAATGGACTTCCAAACGAAAATAACTCTTCAGATCATCTGCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTATTGGCAAAGTTCAGACTTGAGCTCTGACTCTCTTTGATCACATACTAATTTTCTTTCCAATTTGTATTGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTTCAAAGAATGTAAAGTTCTTAAGTGTATGCATGTTGTTTATTTTTGCACTGTGGAGATTCTGAAGCGGTTA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGTTAGATGCTTTGAAACTCCATATCAGAAGAAATAACTTTATAACAATTTTTTTTAATAATGAAAAATATTTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CGTGACAAGTGAGCTCTAAATTCTCTTTATTGTAAAAGAGATGTAAAGGTTTTATATTCTAAATCCTAGTAAAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTGACAGTGATTTTTAAATATAATGCATCTTCCTTTGTCTGCTTAGTAAAAAATTTCATTTCATAATTTTGGCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGCTCTGTAGTGGATCCAAAGTATCTTTGAGTTCTTGCAAACTACAAGTTGTTTCCTTTCCAGAAGGCTTGATT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCATTAGGAGACCCCTCTATTGAGTTCTAAATAGTTTATCTTAGAAAGCCTTGGGTCATTCACAGGTATCCAAC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CAGCCATTGTTTAGTTTGTTTTTGAAGGGGTTTGATAATGCTTTTTAAGTTGTACAGAATGCTTAATCCATCTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ATTACTGTCCTGAGCCATGTAATATGCCTGCATCGTGTTGGGGAAATGTTTGGGAAATATAAGCCAGCATAACG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGTAAAGCTCACTCTTTCACCCTGGAACAGACAAGAGGTGGGCTTAATAGAGGCAGAGACTGGGGATATACCTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGTTTCCCTAGCATTTTTATTTATTTATTTTTATTTTATTTTATTTTTTGAGATGGAGTTTCACTCTTGTTGCC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAGGCTGGGGGTGCAATGGCGCAATCTTTGCTCACTGCAACCCCTGCCTCCCGGGCTCAAGCGATTCTCCTGCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCAGCCTCTCGAGTAGCTGGGATTACAGGCATGCGTCACCACTCCCAGCTAATTTTGTATTTTCAGTAGAGACA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGGTTTCCCCATGTTGGTTAGGCTGGTCTCGAACTCCCAACCTCAGGTGATCCGCCCACCTCAGCTCTCAAAGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GCTGGGATTACAGGCGGGAGCCACTGCACATGGCAGCATTTTTTAAAAATTCAGTTTTAAGATCTCTGGTTTAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GGGAGAGATTTTATTTTACTGAACCAGTTCTATAGAAATTTATTTTATTAGGAAATTTGTCTTTGGAACAAAGT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGCAGCTATAAAATTATTTTTGTTAAGCCTCAGAAATATGAGGAAGCCTGTAAAACTCTAGTGGGGAGATATTA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ACTTGGAGACCTAATGCTCTGTAAATAGTCATTTAAACTGTTGGTTTTAGTGGTTTTGTTTCTAAAATGTTTTC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTTTACCGTGATGCACCAGTATGAGATGGTGCTGACACTTTCTATGAAGTGGTTATGAGCAGGTTTAATAAATC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTCTATACAAGTGTTTGAATCAATTTTAAAACATAAAAAGTGGAAATTTCCTTTTTTGTAGACAGTAGGAACAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GGAATTATATGCATTTTTACTAAGTAGTAATTTTACACTGAATTGTAAATGTTTTTACAGTGAGTTTTATTAAT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AGAATGCTTCACCTTAAATTGGAAAACAATAATAGTCTTGGACTAAGTCTTTGTACTAAAGCATTTGCTATAAT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TATTTTTAAAAAAACAAACAGATGAAAACCTCAGAGAAGGCATGTGGATTATAAGATTTGTCTAGTAAAAATTG 3404
Query 1 ----------------------------------------------------------------ATGGAGTCTC 10
||||.|||||
Sbjct 3405 TAATTGAATATGTTTAAATATTTAATTTCTCATTTTGGGGGGTTTTTATTTTTTTATTTTTTAGATGGTGTCTC 3478
Query 11 ACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAA 84
||.||.||.||||||||||||||||||||||.||.||.||||||||||||||||.|||||||||||||||||||
Sbjct 3479 ACGCTATCGCCCAGGCTGGAGTGCAGTGGCGCGAACTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAA 3552
Query 85 TTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTTT 158
||||||..||||||||||||||||||||||||||||||.|.||..|||||||.||..|.|||||||||.|||||
Sbjct 3553 TTCTCCTTCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCATGCCCAGCTAATTTTTGTATTTT 3626
Query 159 TAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT---------------------------------- 198
||||.||||.|||.|||..||||||||||||||.||||||
Sbjct 3627 TAGTAGAGATGGAATTTTGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGGGTGATCCACCCGCCT 3700
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3701 CGGGCTCCCAAAGTGCTGTGATTACAGGCATGAGCCACCATGCCTGGCCTTTGGGGGGATTTTAATTACAGTAT 3774
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3775 TAATTATAGTTCTAGGATTTCCCACATTTTATAGTAGTAGTTTGCAGGATATTATGTGCCCTAATTAGCAGATA 3848
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3849 TAGACATTATCAAATTATAATGATAGTATAATTATCCCTTTTTAATATTGGGGAAAGAAAAATGAAAATTCATT 3922
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3923 AGTTAATTACTGCTTTGTGTTGTGTGAATTTATTAACAAATAACATTATTACATATAGGTCATTGTTAACAAAC 3996
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3997 AAACATCCCTGAAAACCTCTGTGAAAATTTAATTTTTTATATCCTGATTAATATATTGTGACTTTAGGCCCATT 4070
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4071 TTTCATGTGCTTCACTTTGATAGAGTTAATCCATAAAATTGCTCTTTACTTTAGCTTATCAAATGAAGTATTAT 4144
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4145 TTTGTGGACTGGAGGCCAAAAAGTCAATGTGAGCTTCTCACAGGTTTTTAAAGCTCCACTAAAAATAATTATCC 4218
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4219 ACTTGTCTTTACTTTTGTTGACCAGAATAGTTGGTAACTCTGCCAGAGCCTGTACTTACCTGCCAAAAACAATT 4292
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4293 AAATCTGGTTAATGCCTGAAACCAAATCTCTCAGTCTCAAGTGTTATACTATCCAAGTTTTAAATGGAAAGGTA 4366
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4367 AACTGTGGAGTAATGAAATTTTGGTTTTACTGTACCTTTTGCTATCAAGATAATATTCATGTTTGAAATCTTGT 4440
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4441 CTTTATTTGGAATTTAGTTACTGTCTGCTTTTAACCTTTGCTTTCCTAAAGAAAGTTTGAGATCCAGAGAGTTC 4514
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4515 AAGGGATTGGGGAAAGAGAGGCGTCAAGTCATTTGCACTTTGTACCTGTAAGTTAGGTAATAAACTATTATACT 4588
Query 199 ---- 198
Sbjct 4589 CGTA 4592
