Nucleotide Global Alignment
Description
- Query:
- TRCN0000467678
- Subject:
- XR_001746638.1
- Aligned Length:
- 6428
- Identities:
- 171
- Gaps:
- 6234
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTGCCAATGGCCTATTATGAACCGTACCCTAAAAGCTTCACAAAGGAAAAGTGAATGGGCAGACGGGAATTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGTTTCTAAAAGACATGTGTGACCTGATGTGGAATTAATATACCAATATGTGAAATTTCCAGAAAGTAAGAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGTAAGTGGGGAGTGAGGAGTAAAGGCTTGAAGGAGTTATTGTGATGATCACACCTGGAATTAAGGCACCATG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGAGCTAACTGGAATGAGACTGCAGAGATACAATGGGCACAATACAGTATGTATTGTAATGAAGGAGGAAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACACGTTTATTTTTGGAAAAACTACAAACTGGAATCAAATCCTGCTACAGGAGCAAGTTGCTGCTGCCAGGGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGAAACGCTGCTGGGGTGATGCCCATAGCAACATGACGCCGACAGGACAGGCAAGTCCCTTCCACCCTCCGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCCCTTAGTGCCCCCTGTTGGCTGAGTCTAACAAAGCAGCTGGCAAGGTGGTTCTCAGAATTCCTGCCCCATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACAAAGCCCAGCACAGAAGGGTGGGTCTGAAGCGGGATATGTAGCTTGATGATTGGAACAAAGAACAGAGGCTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGGAAAACAGTTTCGTTATCTCCCCCATAACAGTTCAGAAGAGTTTTATGCTTAACAGAAGGAAAGACAGATTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TAATATTGGCTTTGGAGGAAGGGACATAAACAAGTTACGTTTCACTGATTTCTGCAAATTCGTGCAAAATTAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACTACAGAATACATTGGAAAGAAATATACCTTTAGAATCTCCAAGTACATAGAGAACTGCTTTACTTAGGCGTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACATAAATACAAACGCATATTAATTACCCTGTTCAGTGAGGTAGAAAAAAGACAATTAATTGTTTAGCTGCTGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGATTCTTTATTATTAGGACAGAAGGACAATTAGCTTTAAAAGCATTGCTCAGAACATGTATTTTTTTTTCCCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAATGTTGCTTTTTTTTTTTTTTTTTTCCGAAACAGAACAAACCAAGCCCTTTCCCGCAAGAACTACATTGTGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGAAAGCAAATGCTAAGTAGGAATTAGAAAAAAGAAAACATGCCTAAAGCCCATGGGAATGACAATTCCTGGTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AACTGTAAAAAATGGGGAATGTAATTGAGACAGATGACCAGATTTAGGAAAAATAAACCTCACCATTAAAATCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AATTAAATATTTACATTTCAGCATTAAGTTTCTTCTCAAAAGTTTTGTGAGCAGCGGGGTGACAGTGAAGATTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGACTATAATTTGCCGAAGTTTTTTAAACTAAATTAGTTTTGTGCAATGTATGGAAGGTTTACTCAGCCGCAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTATCCAGCGGCTGCTTTATTATTCTTTTAAAGTGAATCATTTATAACTGTTCTCAGAGATCTTTTATCAGCTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTATCTCCTTCAACTGGACTTGTGATGCCAAGGGATAAAATGAATTGCTGGCTAATATTGTGAGAATTAATCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GACCACAACAGCAGGAGAGTAATGACTTACTTACAGTCAGATATTTGCATTTGGCAGTAAAATCACAACAAAAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TATAAGGATGTTTAATCTTTTGCTTCGACTGGAGCACGGGAACATGTTGGCAATACAAAAGAAATACAATAATC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTGTGTTTTAATTTTGGGTGTTTACCTAATCTGAGGGATTTATTTATTCTAGGAAGAAAGCTCTTATTTGATGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAAGATTTTTTTTTCATTTTGCAGCACCTTAGATTGGTCTTGTTTCCTGAAATTTTTTTTTTTTTTTCTGTTAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGATCTTTGGACAGATGAACTGAGCCTTTTGCCCCTCATCTCACCTTTCTCCAAAATATGCTGGTTCTGTTATC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTTGTTTCCTTTCTGTCCCTTGGCCCCTTGGTAACTTAGAAGAAAGGAGTGGCACAACCAAGACCAAGGGTGGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AACGTTACTGCTGCTATTCTGTTGAAATGATTTCATGTGCTGCTTGTTCTCTTTTCTTAGAGTCTGGCAGTTTC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AAAAAGTAGGATTAGGTTCTTAGTTGCTATGTAAACACTAAAGAAGGTATGCAGTGAGAAATTATTTCCTGATT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGAGTCTATAAATCAAATGCTTTGGAGAGCATTTCCTATAATCAGAAGCCACTTTCTTCAATTTATATGTCTGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATCAGTGTGTTAATGGCATCCATTACTGTTTGGTTCTGGTAAGTTGTAGAAAGTTGTCCTCCTCAGTAACTGTA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGTTTTTGGCCTTTTCTGGATACATGCCCATGTGTATGTCGTATACATATGTTAGTGTGCCTGTTCACACTAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TACACATATTTTTTCCCTTTTCAGAAGTCGTGTAGTATCTAAGTGGGAAAGCTAAGTAGAAAAGCACATAAACT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CAAAGAGACCTAAGTTTAAATCTCTTTTAAAGGCTATTTCCTGGTCATGTTATTCACCTCTTGGAACTTTATTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCCTCATGAATAAAATGAGGATTACAAACCTACCTTGCAGAGTTGTTGTGAGGATTAGAGATTATAAATGAAAC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTGCCTGACACTTGCTCAACAAATGACAGTAGCGATTGTTCCTATAATCCACGGATAATCAGCACCTTTGGATT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCTTGCACTTCTTGTGGGTTTCTGGTTAAAGCAAAGAATAAAGCCTGTACATTTGCCTGGAGCAGTCCATGGAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CGTAGCTTTGGAAAAGTCTAAACTCCGAGTCTACCTTCAGACTGGTAGCTCTAGTCAAGGACAGGGAGCCCCCA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CACAAAGCAGAATCTTGTGCATCTTGTTTTATAGTCTTTCTGAAGTCTATCTTCCTAATTTCCAGAGCAATTTG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTTTTTCTTCTAAACTTCTCAGGGGCAGAGACTGTGTTTTAGTTTTCTTTACATCACTAGAGCTGATACACAGT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AGGTTCTTTTTTTTTTTAATTTTTTTTTTTTTTAGATGGATTCTCACTCTGTCGCCAGGCTGGAGTGCCGTGGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ATGATCTTGGCCCACTGCAACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTTCCAAGTAGCTGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GACTACAGGCGCGTGCCACCACACCCAGCTAATTTTTTGTATTTTCAGTAGAGATGGGGTTTCACTATGTTGGC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CAGGGTGGTCTCGATCTCTTGACCTCGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGATGTGA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GCCAGCGGACACACAGTAGGTTCTTAGTAAATGCTCAGTGAAATGAATGACTATACTGAGTGTTTTTTTTTTTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTAATCCCAAACTGGCAGTGACATCAGTACTCTTTTTCCAAGATGCCACTCACTTCTGCTTTGCTATTTTGCTA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AGAAACTGGTTGTTTGACCTTTGATCAGAATTTGATTCGGAATAGGATCTAGGGATGGCAAATGGGTTGCACCT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TGTGTACCAACACTATTGGGAGCAGATCTCTATTGGATTGTCATCCAACCTTTAGTTTGAAAGAATGGCAGTCA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GTTAGTGGTGGCTGTCACAGACCTGGGAGTGGGGAGAAAATATGTCACGTATTTACTCTCCTTGATAGAGTTAC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TTCTTTTACCCATTAGAATTTTAACCCTCTTTGAATGTTTTCCTTGCATTTCATCAGCCTGGCTGGTTGGAGTG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GAGGGAGATTGAAAGGATGAGAATCCCTGAATCTCATTCTTTCCTCTAGCACTACTTGAATGTCACTGTTGTAA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AGGATGACCCTCTTTATTCACAAGGAGACAACACTGGCTTTAGGATATCTCTTACGGCCAGAGGCTGGGCAAAT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GTCCTACTATCAGGTCAGTATCTGGTGATGTCTGAGTGGGGATCAAACTTCTTAAAGTCTTCTGTTGAGAGTGA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AAAGGAAATGTCCAATGTAACAACAGACAATGACATCACCTTCCATTTTGGCAAAACCTGGACTTAATTTGGAA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TCCTGATCCAAAATCCTTACTGATGTTAGGGAGGTTATTTCCTTGAGCTCCTATCTTCATTAAAATGGGAATAG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 AAATATCAGACTTATCATAGGCATAGGGAAGGTACAGAAGGAATTTCTTGTTATAGTGTAATTCGAACGGATAT 4070
Query 1 ------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACT 56
|.|||||||||||||||..|||||||||||||||||||||||||||||||||.|||
Sbjct 4071 TATTATTATTATTTTGAGACGGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTTACT 4144
Query 57 GCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGC 130
||||.|||..|||||||||||||.||.|||||||..|||||||||||.||||||||||||.||||| ||||
Sbjct 4145 GCAAACTCCACCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCGAAGTAGCTGGGACTACAG----GTGC 4214
Query 131 C----ACCATACCTGGGTAA-TTTTTGCA-TTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT 198
| |||||.||.||.||| ||||||.| ||||||||.||||.||.||.||||||||||.||||||.||||||
Sbjct 4215 CCGCTACCATGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTCTCACCATGTTAGCCAGGATGGTCT 4288
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4289 CGATCTCCTGACCTTGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATTAGCCACTGAGCC 4362
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4363 CGGCCAGGATATTATTATTATTGAAACTAGGTTAATCTTTTAAAATACAAATGATTCATGTTGTAAACAATTCC 4436
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4437 AACAATACAAACAAATAATAGGAAGAAGAAATCAACTCAAATCACACCACTCAGAAATGAGGAGGCATAACATT 4510
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4511 GTGATACGCATCTTCCAGAAATCTCTCTTCAGGATAAATCATAAGATACCAACAAACTTAGTGACTTATTTTAT 4584
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4585 TCAAGTGAACAATACATTCATAGATATCTTTCTATGCCAGTGAATTTTAATTTACATAGTATTTCTTTTTAACT 4658
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4659 TTTCATTATGGAAAATTTCAAACATACAAAAACATTCAAAATATTATATAATCCCCCCATGGATCTATTATCTA 4732
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4733 ATTTTGTTTCATCTGTATCTCTCTTTCACTCCTCACCTCATCACTGGATCATTTTTAAACAAATCCCAGACATT 4806
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4807 GTGTCTGTATTAGTTTCCTAGGGCCGTCGTAACAAACTATCACAAACAGAGTGTCTTAGAACAACCAGAAGTTT 4880
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4881 ATTCTCTCACAACCAGGAGGCCAAAAATCTGAAATCAAGGTTTTGATGGGTTGGTTCTTCTGGAGGCCTTGAAG 4954
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4955 GAAAACCTGTTCCATTCCACTCTCCTGGCTTCCTGTGATATTGACCATCCTCAGTGTTTCTTGGCTTGTGGCTG 5028
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5029 CATCTCTCCAATCTCTGCCTCCATCCACATGGGCTTCTTCCCTGTGTGTGTCTGTGTGTTTCTCTGTGTCCTCT 5102
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5103 CCTTTGTTTTTAATAAGGACACCAGTCGTTGGATTTACAGCCCACCCTAAACCCAGGATGATTTCATCTTGAGA 5176
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5177 TCCTTAATTACATCAGAAAATATCCTATTTCCAAAGAGGATCACATTCTGAGGTTTCAGATGGGGGCTCTAAGA 5250
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5251 CTCAGAGAGATGAAGAGACTTTCCCACAAAACTACTACGCGGCAGTTCCAGGATTTGTATCCGTTGTCGAACCC 5324
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5325 CAAAGTCCAGGTTCCTTTCACGATCCAGGGCTCTGTCAACAGCGGTACCTTCAGCTCAGGCTTTCATTGGGTCA 5398
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5399 TAATGGGCTACTATAGTTCTCCGATGGGGGTTTTGAACATATCACCTGCTTTTTGAAATTAAACATTATCTCTA 5472
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5473 ACATTTTTTCCTTCTTTCCTTCACTCATTCACTTATTCACTCATGAAATATTTATTAAACATATGTCATGTGCC 5546
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5547 AGGTAAAAGAAGTGTGGTTCCTTCCCTTGAGGATCTCAGAGTTCAGCAAAGGTATAACCCTGATGTTTACAGCA 5620
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5621 AAGACATAGCTGTTATAACAAGGAATGTATTCCGGATGTCCTGGTGTGGGGAAAAGCAAGAGAGATCAGATTGT 5694
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5695 TACTGTGTCTGTGTGGAAAGAGGTAGACATAGGAGACTCCATTTTGTTCTGTACTAAGACAAATTCTTCTGCCC 5768
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5769 TGAGATGCTGTTAATCTGTAACCTTACCCCCAACCCCGTGCTCTCTGAAACATGTGCTGTGTCAACTCACGGTT 5842
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5843 AAATGGATTAAGGGCAGTGCAAGATGTGCTTTGTTAAACAGATGCTTGAAGGCAGCATGCTCGTTAAGAGTCAT 5916
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5917 CACCACTCCCTAATCTCAAGTACCCAGGGACACAAACACTGCGGAAGGCCGCAGGGACCTCTGCCTAGGAAAGC 5990
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5991 CAGGTATCGTCAAAGGTTTCTCCCCATGTGATAGTCTGAAATATGGCCTCGTGGGAAGGGAAAGACCTGACCGT 6064
Query 199 -------------------------------------------------------------------------- 198
Sbjct 6065 CCCCCAGCCCGACACCCGTAAAGGGAATATGGCCTCGTGGGAAGGGAAAGAGCTGACCGTCCTCCAGCCCGACA 6138
Query 199 -------------------------------------------------------------------------- 198
Sbjct 6139 CCCGTAAAGGGTCTGTGCTGAGGAGGATTAGTATGAGAGGAAGGCATGCCTCTTTGCAGTTGAGACAAGAGGAA 6212
Query 199 -------------------------------------------------------------------------- 198
Sbjct 6213 GGCATCTGTCTCCTGCCCGTCCCTGGGCAATGGAATGTCTCGGTATAAAACCCGATTGTATGTTCCATCTACTG 6286
Query 199 -------------------------------------------------------------------------- 198
Sbjct 6287 AGATAGGGGAAAACCGCCTTAGGGCTGGAGGTGGGACATGCAGGCAACAATACTGCTCTGTAAGGCATTGACAT 6360
Query 199 ---------------------------------------------------------------- 198
Sbjct 6361 GTTTATGTGTATGCATACCTAAAGCACAGCACTTAATTCTTTACCTTGTCTATGATGCAGAGAC 6424
