Nucleotide Global Alignment

Description

Query:
TRCN0000467678
Subject:
XR_001756629.2
Aligned Length:
4373
Identities:
175
Gaps:
4175

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTAAAAATAATAAATGAATAAAATAAATATATAAATAAAAATTTGACCGACAGCTTAGTAAGGATTATATAGTT  74

Query    1  ------------------------------------------------ATGGAGTCTCACTCTGTCACCCAGGC  26
                                                            ||.||||||.|||||||..|||||.|
Sbjct   75  ATGTCTGCTACTGTTTAAAAAGGCTTTTCTTTTTTTTTTTTCTTTGACATAGAGTCTTACTCTGTTGCCCAGAC  148

Query   27  TGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCC  100
            |.||||||||||||..||||||||||||||||||||||..|||||||||||||||||||||||...||||||||
Sbjct  149  TAGAGTGCAGTGGCACGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCATGCCTCAGCC  222

Query  101  TCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTT  174
            |||||||||||||||||||||||.|||||||||||.||.|||.||||||||..|||||||||.||||.||.|||
Sbjct  223  TCCCAAGTAGCTGGGATTACAGATGTGTGCCACCACACATGGCTAATTTTTTTATTTTTAGTAGAGATGGGGTT  296

Query  175  TCACCATGTTGGCCAGGTTGGTCT--------------------------------------------------  198
            |||||||||||||||||.||||||                                                  
Sbjct  297  TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGGCTCAAGTGATCTGACTGCCTCAGCCTCCCAAAGTGGTG  370

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  371  CTATTACAGGTGTGAGCCACCTCGCCTGACCTAAAAACACTTTTCAGCTCCAATTTTAAACTTAAAATTTTTCT  444

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  445  TATTTTAAAAACAACATATGCATGTATTATCAAATACAGGAAAATATGAAGAGACAGAAGTACTTACTGATCAT  518

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  519  AATCCTACCACCAGAGACATCACTATGAATATGTTTGTACATTTTTTTCCTGTGCATTCTAAAACATAGTTAAG  592

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  593  ATTATGCTAAATATACAGTTCTCATGCTCTTTTATGTCAGAAGTGTTTTCCCATGACATTTTAAACCCCATAGA  666

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  667  CATAATTTTCTAATGGCTACATACTATTCTATCTAACCATTTCCAGAGGTTGGATATTTATCCAGCTTCTGAGA  740

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  741  CTTCCTGTTATAAACAACACTTTGATGAACATCTTGGTACATAAATCTTTTGCATGTGACTACTTCCTTAGGAC  814

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  815  AGATTCCTAGAAGTGAAATTCTGGGTCAAAGAGTAGTAATATTTTAAAGGCTGTTTATGCATACTGACAAGCTG  888

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  889  CTTCCTGGCAATTTGTCCAAACTTTTACTCTGACTAGCATTGTATGGGAGCTTCCCTGAGTGAATGCTGCCTTT  962

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct  963  GAAGTGGGGTCAGAGACTGAGGACCAAGGGGCACAGAGAAAGAAGAGTGTGGTCCTCGATGGGAGGACCCATCA  1036

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1037  CAAACCGTCTTGCACAGTGTAAACCCAGGAGAGGGGCTGAAGAAACCACTGCAGCCCGGGGCCGCCCATTCTAC  1110

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1111  CTGGCCCATGGTAGGCACTCAAGAAATGGTTTGCTACGTGAATAAACAAATCCACAAACATATATTTCTGAATT  1184

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1185  CCTATCATGCGTCAAACACAAGAGATAGGGAGAGAGGAGGAAAAGAAAAGCAAGGGATCATGGGATAAAAGGGG  1258

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1259  ACAGTGGCAGTGGGGTGGACAGAAGTCAGAACTAAATTTACCTCATGCTTTAATTCGGCGAGTTTTCTTAGAAT  1332

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1333  AGTCTGACCATTGCTTACGTTGAGGGTCTATAGTCCTCCCTTCCCCACAAGACAAAGTCCAACCTAATTCAGCA  1406

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1407  CCAAGATCCAAGCAGCTCGGAAGATACAGGAGGGAAAAATCTGGTGTAGATTAAGTGCCACCCCCCAGCAATGG  1480

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1481  CCAGGACACAGCAGCAATGTTACCTAAGAAAGCAACTGCGCCTCTTGCTGATCAGCTAGACATGAGGGCAGTGT  1554

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1555  CCTACCTCAGCGGTTTGCAGCGGACATGCTGTCAGGCCATTGGGATAGTTCCCATAAGCCACTCCTGGTTGTCA  1628

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1629  CCACTATTCCAAGTGGGCAGGAGCAGCCTTATTGACTGAGATGGGCGGCTATGGACACACATGGGTGTACGCAT  1702

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1703  GTGATGGAAATGGGGGCTTGGGGCCCTGAGGGTCCACAGGGGCTGCGTGGTCAGGGAGGGTGGGCATGGCATCA  1776

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1777  CAGGCACCCCAGGGGAGAAGCTGGCTTTCTTCCCATACTTTTGGCACTGTTTTCTGTTTTGTTTGCCTTCAAAG  1850

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1851  AGCAAGTGATGGCTGGACAGCAAAGAGGAGTGGAGGCCGGGAGAATGGGCAGCTAGCCCAGCGCTCTCCAATAT  1924

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1925  CTGGGAGTCGACCGCACTCCTGCACTCCCTGTCATCCCTGCTAATGGTGAGGAACTGAGCAAAAGAGCCTCCAG  1998

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 1999  AGTGACAGGTGACTTAAAGCGCACGTGGCTCTACATTTACAATTGAAGTGGGCTTTGGAGATTGCAGATTCTGA  2072

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2073  ATACCTGCTGGGGTGGTACAGAGGCTGTGTTCTGGTTTTGCCATCTTGGACAGGGGGTTGGGAGTCTGGGGGGC  2146

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2147  TGCCTTCTCTCCTCTTCGTGCAGCTCTGCTGGGGCCTGTCTCACACTTGTGAGCAGAGTTATGGCTGGATTCCA  2220

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2221  GGGGAGACAGAGCTTGGTTGTGAAATGTAAGGTTGTGAAATGAAGGGCTTGTGAAATGAACAAAGAATGTATTT  2294

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2295  AAGGGTCTTTCATTTTAAATCGAACACTTACATAGCACTTACTACTTGCAAAGCTCCACTCTAAGCACTTTACC  2368

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2369  CATCTTAATTCATTTAATTCTCTTCTCAACCCTAAAAAGCAGGTATTACCATTGCTCCAATCTTACAGATGAGG  2442

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2443  AAACTCAGGCATGGAGAGGTTGAGCGACTTGCCCAAATTCATGCAGTTAGGACCTGGCAGAGCTGCGCTTTGAA  2516

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2517  CCCAGGCTGCCTGGCTCTAGAGTGTGTGCACGAAACTTCACTGCCATATGAACAAAACTGCAGGACATATGTTC  2590

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2591  TCAAAGCAAATAAGCCTCCCAGAGAGGCTTTTCCTGATGGCTTCAAGGACCTGCCCTAGCCTGGTCTGACTTCC  2664

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2665  CAGAGGGGATCCAGTCCCAACATTGGCCCTATCTTTAGACCACATTTCCATCCCATTCTCAGTGAAAACCCTGA  2738

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2739  GTCATGACAGAAGACAACCAATGCTGGAGAGAGGAGGTTTCAGGGGATGCTGTCCTGATCCAGGCTGGTGAGGC  2812

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2813  AAGGAGGGGCTGCGGCTTCCTGAGCTCTCCGAGCTGCTAATGTGCGTGGGGAATGCTAAGCAGCCTCCAGGCTC  2886

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2887  TGACCAGGTTTGTCTTCTAGGACCCACTTGCCCAATGGGTGCCAGGACACCAGGTCTGGGTCTGGAGAAGAGAA  2960

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2961  TTCTTCTCCAAGGGATGTTGATGGTCCATTCCGGAAATGAAAGCTTCCCACGGTCTGCCCTGCACCAGGCTTTC  3034

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3035  ATCAGTGAGAAATACCCCGAATTTACACCCAAACCTAAAAGGAGAAGCGTAGAAGTGTTCTTGGCCCAATTCTT  3108

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3109  TTAATTGCAAGTCCTACTAGCAGGACAACTAAGGGATTATCCCTAAACTTTCATTTAAAAGTCTGGGGAGGGAA  3182

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3183  GGAAGGAGTAAAAACTTTGGCAGTCAGATTTTTCTCACTTTCACATTTATTCTTTACTATTAATGACTTGTTCA  3256

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3257  TCATGCTGTACAACAATTGTGCAAAGATGCATACGTTTGCCACTATAATTTGCCATTAAAATGTAATAATCAGT  3330

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3331  AAGTATACACGGCGTGCCAGGTGCTAAACAGCAGATGAGGGGCGAGGTGGGTGAAGGTTCCATGCCGTGAGTTT  3404

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3405  GTGGCTAATGGAACCCCTCATGCTGCTGCTATCCTTCCTGGGCCCAGCAGTTGGATCCTGCAGGGGTGCCCCAC  3478

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3479  TCTCTCGGGGACCTCAGAAATGTCCTCTATGGTTAGGGACGGCTAAGGAGGGTGTATCTGCAGGATTCCCAGGC  3552

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3553  ACTGGGAGGTGTATAGAGGTCACAGGACCCATACAACCACCCCAGACCTTGTCAGAGTGCTCCAGTCTGGCATC  3626

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3627  CGCAGAAGGCCAGGGAGGGTCAAGGGGCAGTGCTGAGCCACTGAACACAGCCACAGAGTTGGAGCTGCCAGGCA  3700

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3701  GAAGGTGCACGGCTCAGCAGAGGAGACCCCTTGAGGCAGCAATGCTGGGGCCGGAGGGTCAAGGCTGAGGAGAA  3774

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3775  GGCCACCGCAATGCCCTGTGTGGCCCTCATGAGCTGAGGGACCATGGGAAGGTGGCCTAGCCACTCTGAGCCTC  3848

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3849  AGTTTCCCCGGGAGATAAAAACAGAGACAGTATCTGCAAACTCAACAGGGCATTATGGTGAAGAAATGAGAGGA  3922

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3923  CTCAGGAACATGTTAGCTGTCACAGCCTTAGCCACTGCCAACTCCAGCCAGGCAGCTGGTCAACATTGCCGAGC  3996

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3997  ACCAGCCAGGTGACAGGAGGACAGAGGGCTCGGGGGAAACCAAATCCATCCCCCCAAACAAAAGAAAAACACAA  4070

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4071  ACAAAAATAGGCACCAGAGCCGCCGGACGTGTACAAAGACTGTGTACGTTCTGCCTGTGGACAGAGCCCAGGAA  4144

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4145  GAGCACCCTGGCTCCTGTGCTCCACGCCTGCAGCTCATCTGGAAGGTTCCCTGTCTATGGCAGCCAGGTACCCA  4218

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4219  GGCCAGCCTGCAAAGGCCCAGTAACAGAACTTGTGTCTAAGATAGAACTTCATAGCTTTGTGCTGCCAAGCCCA  4292

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4293  CCTGGAGCCCCCTTTAAGCCTTCTTTTGTTTGTTTGTTTGTTTGTTTTGAGACAGGATCTCATTCTGTTACTCA  4366

Query  199  -------  198
                   
Sbjct 4367  GGCTGGA  4373