Nucleotide Global Alignment

Description

Query:
TRCN0000467678
Subject:
XR_938957.3
Aligned Length:
4061
Identities:
171
Gaps:
3864

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GATTTGTGTGTAGAGATCACAAACGCAACTTCAGGGACCAAACATGTACAGTGTATAGGCCGAACTGTAACTTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATAAGAAAGTAGAAAGTAATGGGCTATGTTGGGAGCTAAACAGTGCATGTCTTGTCTAAGGAATTCAAAGCTTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TAAAAACACTCTTGTAGGCTTACAAAACCTATGTTTGGAGGCAGGATTTATCTTGACCACTATTTCAACACCTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TAAATAGGAATAGGACTTACATAGAAAAAAACTCGAAATGATCTCCTACCCCTTCAATTCCAGGCTCGACCTTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGAATGAAATTTCTCATCTTGGCTGGCCTTTTGAGCACTGCCACTGCTCTGCCCATCCCCGTGAGTACACCCTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTCAGCTGCTGACTCAATTTCAGATTTAGAGTCATCGCATTTCTCGGCTAGAAAGCAGGTCTTATCTTTTCATT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCACAAAAGAGGAAAGCGGAACCCAGGAAAGTCATAGAACTAGGAGTTCACCACTCTTTGTCAGTCCAAGACTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGCCCAGTACAAATCTCAGCTCCATATGCCATGTGCTAGCTGTGTGACTTTGAACTAACCCATGGTTTCCTTGT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTATAAAATGAGTCCTAGGAACACCTCAGAGTTGCACGGAGATGATTTTTTTAATGCATCTAAGGCAGAGAAGG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTCCTATTTGAAAGATAGGATGTTCTCAATAAACTCAGTGATATAGAACAAATATTCTGCAGTGACCCAGGTCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AAATTAAGCAGTTTGAATTGAGTTTCATTTGTAATGCCCTTGCCCCAAACCATCTCATGTTTTCTTAAAAGGCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GTTACATGGAAATGCTCTGACACCAAAGGACTATCTACCTCATTGTAGATTTGATTTTAAAGAAGGAAATATTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AAGATAACTTACATTGATTACTAAATTATGAATATAAAAACAACTTATGCCTGAATTATATTTGAGTGATCATA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CAGACACACCTTTAAAGTCCAATTTTTGAAAACCAGATTTGGATAAAAAGCTACATTCATCTATAGTGCCCTTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ATAACAAACCTAATTTGTTTCTTTAGACCACAATCCTTTTTGCCAAAGCTGGCAAGTATCGTGGTCTAAAATTC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CAAACAATTTGTATTGCCTGTTTCTTTAGGCTGATGGGAATGCTGCAGTATACATATTTCATTAATTCTAATAT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTACTTTTTGATATTTCAGCAGCTCTGAAATTGAGCTGTGTCTTAAAAACACAATTTGATAAAGTGTCACGGCA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCTTAACAGCAGCGCTTTTCTTTTTTGGTAATTTATGAAATAATGGTGCTTTTGACAATGATAGCATCTAAGAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TATATGAAATACTGTAATCCCAGAACATCATTAACTTCACCTATATAGACATTTTGTCATCAACTGACTATATA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CAAATGAGATCCACTGAGTCTAATCTGGGTTTACTAGTCTGAATATGAGGGCACCAAGTAGGCAAGAAACTCTC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TCCCCTGCACACTTTGTATCAAAGGAGCTTTTGAAGAAGTGAGGGAGCTTTCAAAATTTGTGTTTGGGGTGCAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AACTTAAGTGTACATTTCCACACTCCCTTCACTTTGAGTTTATAACTACTGAGAACTAAATCAAGAACACCATT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CAAAGATTTACAAAAGGAAATATTCATGTAATATGGAATTAATCTTAAGAAATGTAAATAAAAGCATTCTTTGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ATATAAATTTAAAAGCAAAAAGCCTTGGTCTTCCAAATCATTGCACAAAATTAATTAAACTTTTCCCTATTAGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TATCCAACTGCTTTTTATTTCAGAAGTGAAGTTACATTACTGATGGGTATAATGCTCCATAGTGGCTTATTACT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TATTCTCCTTTAGAACAAAACCTCTCTTTAGTGGATAATGTATTTCCATATGCTGCTTTACCTTGTTGCTGTTA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TTGTTTTGCAAGCTCGAACAATATGCTGAAAGTTCCAGTGAACAGGTGAACTTCTAATTGTATTTTTAAATAAT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GCATTCATCATTTTAAAAGTCTGCCATTGTCTGAAATGACTGACATCATGTTTCTTTTTACAGAGATTTATCTT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TTACCCACCACAAGTACCACCATTTTTCCCTCAGGTCCTCTTTCCCCTACCTCCGCAACCGCCCCTGGTCCTCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CACCTAATGATCTTATCGCGTTACTCATTGCTATTTTGAACCAACTAGGGGTAAGGCTCTATTTTTATGCTATA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ATAAACTACACATTTACTTAATAGACTAAAGATAACATCTTACTAAATTTTTTTTTGTTGTTTTTTTTTTTAAC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TTTTGGAACTTCTCTGGGGTAAGATTTTATTTCCATGACTAAATTGATAAAGGTAAGTTATATTCAATGCCACG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AAAGGTAAGAGAAACTCTTTGTAACTATAAAAATATGAGAGTCAACCTCAACTGATCTACCAAACTAGAACTCA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TAAGTTATAAACTCATTTCCTCCAAAATCTTTACATCAAAATTTTTGCCAGTCTAAAAAGGTATTTTTTAATAA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TGTCCTTGATATTTCACAAAATTTAAATTTACAGGCATATATGCAATATGAAATTTCAAACAACAAAGTTTGCT  2590

Query    1  -------------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTG  49
                                     | |||||||..||||||||||||||||||||||||||||||||||||.|
Sbjct 2591  TCAGGCTTTTTTTTTTTTTTTTTTGA-GGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTCG  2663

Query   50  GCTCACTGCAACCTCTG-CCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAG  122
            ||||||||||||||||| ||.||..||.||||||.|||||||..|||||||||.||.|||||||||.||||||.
Sbjct 2664  GCTCACTGCAACCTCTGCCCCCCCAGGCTCAAGCGATTCTCCTGCCTCAGCCTTCCTAGTAGCTGGTATTACAA  2737

Query  123  ACGTGTGCCACCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGT  196
            .|.||||||||||.||||||.||||||||.||||||||||.||||.||.|||||||||..||.||||||.||||
Sbjct 2738  GCATGTGCCACCACACCTGGCTAATTTTTACATTTTTAGTAGAGACGGGGTTTCACCACATTAGCCAGGCTGGT  2811

Query  197  CT------------------------------------------------------------------------  198
            ||                                                                        
Sbjct 2812  CTCAAACTCCTGACCTCAAGAGATCCACCCGCTTCAGCCTCCCTAAGTGCTGGGATTACAGGCGTGAGCCACTG  2885

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2886  TGCCCAGGCTTTCAGGCTTATTTTTGTCTTATAGGCAATTCATAGTAAATAATGAGAAAAGCCTACTGTAAAAC  2959

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2960  TGCCACACCTAGAAATGGACTGATCTCAAGGCAAGGTAACACATCTTAACAAAAAGCATTAACTTGCTGGATAC  3033

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3034  AAAGGCTACAAACTTTGACTTCTACTTTGACTTTCACTGAAGTTTGCTTTCATGTAAAATACATACCAAAAAAA  3107

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3108  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAAACGTGGAGACCAAAAAGGTATATATCCCTTTTGTTGTTCTAATA  3181

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3182  TTTTTAAGAAACAGGATCTTGCTATGTTGTCCTGGCTGGACTACAGAGGCTATTCACGGGCCCAATCATAGTGT  3255

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3256  ATGTACTACAGCCTTGGAGAAAGAAACTGGATTTCCACCCAACTGCTTCTCTCCTAACAAGTTACATTGCCCTG  3329

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3330  AAGTGCTTATTTAGTACCTTTTACCATTTCAAATACTTAGACTATCTGAGGCCAAGTGGGAGAGATTAAGCTCT  3403

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3404  ATGCTGTAAACAGTTAAGGATTCAATTTATCAGCATTTAACAGTTCCACATTATTTTCCACCTCCAACATACAT  3477

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3478  GATTATACCAATATTAACACATCAGCAATAAAATAACCATAAAATGGGAGGCATGGGTGAAGAAGGAATTGTGG  3551

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3552  TGAAAATATCTTCATATAAATTATAACTATAATCTGTATTATCTATTTTGACAGAAATAATTCTCCCACTACTA  3625

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3626  TGCCAGAAGTTACGTATGGTTAGTAAAATCTCCAAATTCTTTCATGCATTTATATCCTTTTCAATATTTTTATC  3699

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3700  ATGAGTTTAATTGCCTCTGATTGTGTCCACAACGGTAAATTAATAATATGATGAAAATAGGTGTAAACAAGACC  3773

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3774  AATTAATTACAAATGCTTTCTTCAAAGGATGTATTTTAAAGTCAGTTTATTAAAACTCCAGAAATATTTTAGAA  3847

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3848  AATAACCACCACCAGAAGTCCTAAGCATAAGAAAACATACTGTTAAATAAGAATAGCCTCTCGAAGTGCTCAGA  3921

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3922  ATTTTCAAGTTCCCCCTTTAGCCACCAAATATTTAAAGTAGTTATGATCCTAAGGAAACTTTGCATATCCTTCT  3995

Query  199  -----------------------------------------------------------------  198
                                                                             
Sbjct 3996  ATTTGAGTTTGAAATGCTTTCAAAAGCTCAAGAACACCTGCTGACAAAACAAACACTGACTGTGG  4060

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