Nucleotide Global Alignment
Description
- Query:
- TRCN0000467678
- Subject:
- XR_943500.3
- Aligned Length:
- 2913
- Identities:
- 170
- Gaps:
- 2719
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCCGCCCCTCCTCGGACTCTACCCAGTACTGAACTAGGGGCAGCTGGGCTCCAGAGTCCCTCGGGTCTCAGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATGGCGGTCGCGGGGCCCGCGCCCGGAGCTGGCGCCAGGCCCAGGTTAGATCTGCAATTTCTCCAGCGGTTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGCAGATACTGAAGGTTTTGTTTCCTTCTTGGTCATCACAAAATGCCTTGATGTTCCTGACCCTTTTGTGCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACCCTACTGGAGCAATTTGTGATCTACCAGGTTGGCTTGATCCCCAGTCAGTACTATGGGGTCCTGGGAAACAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGACTTGGAAGGGTTTAAGACTCTGACATTCCTGGCTGTCATGCTCATTGTTCTGAACTCCACGCTGAAGAGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTGATCAGTTCACCTGCAACCTGCTGTATGTGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACCGCCTCTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGATGACATCGATAACCCGGACCAGCGCATCAGCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCCGTTCACCCTCGTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACTACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCGTGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAGAAGCTGGAGGGAGATTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGCTGCTTTCTACAGAGCTGGGCATGTGGAGCACA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGAGGACAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTGCATCTACCTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGACTGCGAGATCCTGGGCGAGAGCGAGTGGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTGGACACACCCCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAAGATCTCCGAGGGACAGAGCCTGCTCATC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGCCTCTGGACGAGTACACGGGGCTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGTGCAGATGCTGACGGACTTTGGGCCCCATGGGGTGCTATTCCTGCCACAAAAGCCATTCTTCACTGACGGGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCCTTCGGGAGCAGGTGATATATCCCCTGAAGGAGGTCTACCCCGACTCAGGAGAGATGCCCACTGGGACAAGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAAGTGATGCCTTCCTTCACCCACCCCTTCCCTTATGAAGATCTGCAACCTGTGGTTTCAAAGCCTTCGCCCAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CATTCTGAGGCCCCCACCCCTGCATCATCCATGATGTGCCCTGTCTATTCTTTTTTTTTTTTTTTTTTTTTTTT 1702
Query 1 ------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCC 68
|||||||.||||||||||||||||.||||||||||||||.|||||||.||||||||||||||||..||
Sbjct 1703 TTTGAGATGGAGTTTCACTCTGTCACCCAGACTGGAGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTCCACC 1776
Query 69 TCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTC--CCAAGTAGCTGGGATTACAGACGTG--TGCCACCATAC 138
|||.|||||||||||||||.||..|||||||||| || |||||||||..||||| ||| .||||||.|.|
Sbjct 1777 TCCCGGGTTCAAGCAATTCCCCTGCCTCAGCCTCTTCC--GTAGCTGGGGCTACAG--GTGCACGCCACCTTGC 1846
Query 139 CTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT-------------- 198
|||..|||||||||.||.||||||.||||..|.||||||||||||||||||||.||||||
Sbjct 1847 CTGCCTAATTTTTGTATATTTAGTAGAGACAGCGTTTCACCATGTTGGCCAGGGTGGTCTCCATCTCCTGACCT 1920
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1921 TGTGATCCACCTGCCTCGGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACTGTGCACAGCCTTGCCCTGT 1994
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1995 CTATTTTGACCAGCCAGGAGGCTCTGGCTTTTTGCAGAAGGCTTCTTTGTTGTGCAGGTTCTGCCGATGATGAG 2068
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2069 AGGATCTTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGT 2142
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2143 GGACTGGAACTGGTATGATGTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTGC 2216
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2217 AGCCGAAGTACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATC 2290
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2291 GGCCAGCAGCTGGGGATGACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGTTTCATTCCTTGGTTCT 2364
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2365 GAAACTCTGTGGAGGAGGAAGATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCTCTGGCTTTTGGAAGGAGA 2438
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2439 GCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGC 2512
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2513 CACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGCAGTGGTGGGCTGAGCCCAGGTCTA 2586
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2587 GGTTTCTGTGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGCCTCAGCCAGAGCCTCCAT 2660
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2661 ATGCTTGAAGTGCTGATTACCTACAAATGATTTCAGATCATGTTTGCTAAAGAGAAATCTGGAAGTGTGAGATC 2734
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2735 TGTAAGAAATGAAAGAAATGACTCTTGGAGTCAAGAGATCTGGAAATCTTTTAATCAGTTAAATTGTGCAGCAA 2808
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2809 TAGATTTTTAACTTTAACTGACCATTTAAGTTTTTTAATAAGTTTTTTACAAAGAAAAGTTAAACATTAAAAAG 2882
Query 199 --------------------------- 198
Sbjct 2883 AATTACAGCTTTCTGTCTTCTCTATCA 2909
