Nucleotide Global Alignment

Description

Query:
TRCN0000467678
Subject:
XR_946966.3
Aligned Length:
3734
Identities:
173
Gaps:
3536

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAATTTGACTGTGGGAGGGAGGGTGGTTTTGGTTTTTGCCATGTTGGTGTTTTAAAAGCAGCAGGGAGTTGAGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCTTGTGGACTGGAAGGAAGGAGCCAGCAGACAGGGAGGAGAGGAGGGGAAGTGGGTAGTGAAGGGGAGAGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AATAGCCAGGGGTGGTGGGCAGAAGGAGAGGAAATGGAACCCTAGAGGCCTGGGCAGGAGGCCTCTTGCTGTTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGCTGCGGCCGGCTGTATTTTGAGACCTTAACCTTCACCTTCTCAGCTGTGTTGGATGCGGCCTCCAGAGGCCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGGAGAGAACAGCTCAACTCCAAATAGGCGCATTTCCATCGCCTCCATCGCCGCTGTAGCTGGTGGCTGTCAGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTGGACAGCACGGTAGAGGCGGGTCAGGAAATGCAAGGAGAGCACTTTTGGAAGCGTCTGGATCCTGGGCCCTC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGGGAGGGCAGGGCCTGGGTCCTGATGTGAGGAGCCTGGAGCCTGTCCGTGGCCGAGAGGGCCTCCTTCCTCCT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCCTGGCCGACACGTCACCTGCTCCGTCCAGTCCACGAGAAGCAGCTGTGGCCCAAGCCCATGACCTGCCTTTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTCCCCAGCGTCACCATCTGTGGCAGCCTGGGATACGCATGAGCTCCTCAGGAGGGCGGAGCTCCGTGGAACAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACATCTGGATGACAGGAGGGAGCCAGGAGCTGTGAGAAGACGGGGGAGCTGCCGCCGCAAGAATGCAAGACCCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CGGGCTCTACGATGCGGGGGAGCAGCGGGCATCTGAGGAAGGGGCGTCAGGGGCACATGGCCAGCCCTCTTCAC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCCACAGTCTGCCCCAGGCCAGCCCCACTAGGAGTGACCCATTTTCTCCTAGCAGGATTCCTTGCATGGGGTGG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCTGGACCCAAAACACCCGCTCTGAGGATTCCCTGTTAACCACAGAGAAGGTTGACTCAAGTTTCTTTATTTGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCATGAAACTGTGGGGCATCTCACGGTGCTTCTTGGGTCCACTGGAGAGCCCTGGAAGCTCAGAAGAGGCAAGA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GGGGCCTACTTCTCCCTTGTTTGGGCTTTGTTTGCTAAATACCAATATTAGATTAGGCAACTCTGCAAACAAAA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCAAGGCCTGGCCAGCTGCCCAGGGTGTTTAAAGTCCAAGACATGAAGGCAGGACGTGTGCCCGTGGACTTGCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CACGCAAGCAGGCCGAGGGGAGAGCAGCCCGGCAGAGACCTTGGTGGTCCAGGGCTGAGCAAAGGCTTCCCCCA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CCGGTCCATCCCAGTGCGCTCAGCACAGGAGTTAGCGGCCACACACTTCAACCATTGTCTTATTTTAGAAAATG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ACATCTGCTGGGCGCGGTGACTCACGCCTGTAATCCCAGCATTTTGAGAGGGCAAGGTCAGGAGTGATCACTTT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGGTGGACCACGAGGTCAGGAGTTCAAGATCAGCCTGGCCAACATGGTGAAACTCCGTCTCTACTCAAAATACA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AAAATTAGCCAGGCGTGGTGGCTCACACTTATAATCCCAGCTACCTGGGAGGCTGAGGCAGGAGAATGGCTTGA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ACCTGGGAGGCGGAGGTTGTAGTGAGCCGAGACTGCTCCACTGGACTGCAGCCTGGGTGACAGAGCGAGACTCC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GTCTCAAAAAAAAAAAAAAAGAAGATGACATCCATGATGTTAATAAAAGCGGAGGTATTAGGGGAAGGGAGACA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TCCTGTCAACTTTTCATCAGCTCACATTTGACCCTCAGCTTTTTTCTGTTAATCTAGTTATCATATCAACAGCG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TTCTCACAAATGACCAAAGACAGTGTCGGTGGCTCTTAGTGTTTGAAAGTAAAAATGTATAATATTTTTAAAAT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GCCAACAGACTGAAAACAGGAATGAGGCATCATTGGTTGTAAACTGTCTCCTGAGCTGGTAATTCCATCTCCAT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CTCAAGCAGAAAAAACATACCCGTGTGCCCAGGGGCTCTCACCCCAGCACACCTCTTGCCCACTTAGCCTAGTT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GATGGTCAAATTACTGAGTGGAGTTTAAATGCCCTTCAGACTTTATAGGTGGAATTCCTGAAACGCGTCTATCT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  GGAAGAGGAGAGGTAGTAGTATTGGGAAGGGAACAGGAAGTAGGCGGTGTGGAGTGCTGTTTGTTAAATGCTAT  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CTCTTACCGTCTGTGTTTGTTTCTACTTAGCTTGCCTTATCTCTCTCCTCCCGCCCACTCTGTCATTCAACTAC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CCAGTTCCCCACCCTGGTTTCTTGTGTATTTTTTTCCAGGAAGACACACACACACACACACATTTATATATATA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TAAAATAGGCCAGATCCCATCCTTCCTGGGTCCACCCTTCCTGGGCAGCCCCTCAACCCAGCACACAAACACAC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGTTATTTTTCTCATCTCAATTCTCAATCCACCCTTGATCTTGTACCCCAATCCAGCCACTGCTCAATTCTTTG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CTTTCTTTAAAATACAATTTGTCAAATTATATGTATGTGTGTTGGCAATTACATATATACCTGTATATTTACTC  2516

Query    1  ---------------------------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCA  35
                                                   |||||||||..|||||||||||||.|||.||||||
Sbjct 2517  TCCACCCCTCTTTTTTCTTTTCTTTTTTCTTTTTTTTTGATGGAGTCTTGCTCTGTCACCCAGACTGTAGTGCA  2590

Query   36  GTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTA  109
            |||||...|||||||||||||||||||||..|||||.||||||||||.|||||||.|.|||||||.||||||||
Sbjct 2591  GTGGCCCAATCTTGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCGATTCTCCTAGCTCAGCCCCCCAAGTA  2664

Query  110  GCTGGGATTACAGACGTGTGCCACCATACCTGGGTAA------TTTTTGCATTTTTAGTGGAGAGGGAGTTTCA  177
            |||||||||||||..||||||||||||.|||||.|||      ||||||.|||||||||.||||..||||||||
Sbjct 2665  GCTGGGATTACAGGTGTGTGCCACCATGCCTGGCTAATTTTATTTTTTGTATTTTTAGTAGAGACAGAGTTTCA  2738

Query  178  CCATGTTGGCCAGGTTGGTCT-----------------------------------------------------  198
            |.||||||||||||.|||||.                                                     
Sbjct 2739  CTATGTTGGCCAGGCTGGTCCCGAACTCCTGGCCTCAAATGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGA  2812

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2813  TTACAGGCGTGAGCCACCACACCCAGCCTCTCTTTTTATTTTTTACAAAGATTCTAGCTTAGTACTTCCTTGCA  2886

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2887  TTTTTCACTTTGTCTTGGAGATCATTCCTTATCAGCACATGACCTTTCTTTTATTTTTTATTTTTAAAGGCTTG  2960

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 2961  TCAAGTGAAGCGGTGGGAGTGGAGAAGGAGCAAAGAAATCTGTTAACTGGTTGGGATCGGTGAGTTGTAAGCAG  3034

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3035  CCGCATAAAGAACATTTCTGTTTTCTTGGATTACAACATGATTTCCATTGTATAGAAATACCGTATTTATTCCG  3108

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3109  CCAGTCCCCCACCCATAGTCACTTAAGTTGTTTCCAGCCTTCCCAATCTTCTTGCTGTTACAAGGCTGCCACGA  3182

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3183  ATCACCTTGTGTATACTTGATTTTTCTGATAAGTTAAAAAGTCCTAGAGGAGAAATTGCCCAATCCTTTGTGCA  3256

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3257  CCTGTAATTTTGATAAATATTGCTAAGTTGCCTTCCATAAGGTTTGTACCAATTTACACAGCCACCGGCAATGA  3330

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3331  ATGAGAGTGCACTTACCCACACCCCTACCAATGCAATCTGTTAGCAAATTTTCTGAACTTTGCCAATTTGGAGA  3404

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3405  AAATGGGTATTTCAGCGTAGTTTGAATGTATACTTACTTCTCTTGTGGGAAATTATGTTTAAGAGCCATTTCCT  3478

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3479  TTTCCGTGAACTATGTTTTAAAAATCTTTTCTGGTTTGTTTGTTTTATTGAGATGGAGTCTCACTCTGTTCCCC  3552

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3553  AGGCTGGAGTGCAGTGTGGTGCAATCTCAGCTCACTGCAGCCTCCGTCTCCCGGGTTCAAGTGATTCTCCTCCT  3626

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3627  CAGCCTCCCAAGTAGCTGGGAACTATAGGGTCGCGCCACCACACCCGGCTAATTTTTGTATTTTTAGTGGAGAC  3700

Query  199  ----------------------------------  198
                                              
Sbjct 3701  AGGGTTTCACCAGGTTGGCCAGGCTGGTCTTGAA  3734

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