Nucleotide Global Alignment

Description

• Query: TRCN0000467702
• Subject: XM_006540381.3
• Aligned Length: 1009
• Identities: 808
• Gaps: 47

Alignment

Query    1  ATGGAGG------TGGCGGTGCCCGTGAAGCAGGA---------GGCCGAGGGCCTGGCGCTGGACTCCCCGTG  59
            |||||||      .|.|...|||.|||||||||||         ||..||||.||||.||||.|||||||||||
Sbjct    1  ATGGAGGCCCCAACGACCCAGCCAGTGAAGCAGGAGAACCTGGCGGTTGAGGCCCTGACGCTCGACTCCCCGTG  74

Query   60  GCACCGCTTCCGCCGCTTCCACCTGGGCGACGC-GCCGGGCCCGCGGGAGGCGCTGGGGCTGCTCCGCGCCCTG  132
            ||||||||||||||.|||||||||||||||.|| ||.||| ||.||.|||||.||||||||||||||.||||||
Sbjct   75  GCACCGCTTCCGCCACTTCCACCTGGGCGATGCAGCAGGG-CCACGTGAGGCCCTGGGGCTGCTCCGTGCCCTG  147

Query  133  TGCCGGGACTGGCTGCGGCCCGAGGTGCACACCAAGGAGCAGATGTTGGAGCTGCTGGTGCTGGAACAGTTCCT  206
            ||||||||||||||.|.|||.||.||||||||.||||||||||||.||||||||||||||.||||.||||||||
Sbjct  148  TGCCGGGACTGGCTCCAGCCGGAAGTGCACACGAAGGAGCAGATGCTGGAGCTGCTGGTGTTGGAGCAGTTCCT  221

Query  207  GAGCGCGCTGCCCGCCGACACGCAGGCCTGGGTGTGCAGCCGGCAGCCGCAGAGCGGGGAGGAGGCGGTGGCCC  280
            ||||||.||.||.||.|||||.|||||.||||||||||||||.|.|||.||||||||.||||||||.|||||.|
Sbjct  222  GAGCGCCCTCCCTGCAGACACCCAGGCGTGGGTGTGCAGCCGCCGGCCCCAGAGCGGAGAGGAGGCTGTGGCGC  295

Query  281  TGCTGGAGGAGCTCTGGGGGCCAGCAGCCTCCCCCGATGGGTCGTCAGCAACGAGGGTGCCTCAGGATGTGACG  354
            |||||||||||||||||||.||||||.|||||||.||||||||||||||||.|||||..||||.|||||||||.
Sbjct  296  TGCTGGAGGAGCTCTGGGGCCCAGCAACCTCCCCAGATGGGTCGTCAGCAATGAGGGCACCTCGGGATGTGACC  369

Query  355  CAGGGCCCTGGGGCCACAGGTGGAAAGGAGGACAGTGGGATGATTCCCTTAGGCACCGCCCCTGGGGCTGAGGG  428
            .|.|||||.||||.||..|.|||||||||.||.||||||...|||||||||||.|||.||.|||||.|.||||.
Sbjct  370  GAAGGCCCGGGGGTCAGTGTTGGAAAGGAAGAAAGTGGGGCAATTCCCTTAGGAACCTCCTCTGGGACAGAGGT  443

Query  429  GCCGGCGCCTGGGGACTCCCAGGCTGTGCGCCCCTACAAGCAGGAGCCCAGCAGCCCC---------CCGCTGG  493
            .||.||..|.|.|.||..|..|||..|||||||.||||||||||||||..||||||||         ||.||||
Sbjct  444  ACCCGCAACGGAGAACAGCGGGGCCATGCGCCCATACAAGCAGGAGCCGGGCAGCCCCCCACCAGCTCCACTGG  517

Query  494  CGCCTGGCCTGCCCGCCTTCCTAGCGGCCCCGGGCACCACGTCCTGCCCCGAGTGCGGCAAAACGTCCC-TGAA  566
            |.||.|.|||.||.||||||||.||.||.||.|||||...|||.|||||.||||||||.||..| |||| ||||
Sbjct  518  CACCGGTCCTCCCTGCCTTCCTGGCAGCTCCAGGCACTGTGTCGTGCCCGGAGTGCGGGAAGTC-TCCCTTGAA  590

Query  567  ACCAGCTCACCTGCTGCGCCACCGGCAGAGCCACTCGGGCGAGAAGCCGCACGCCTGCCCTGAGTGCGGGAAGG  640
            .||.||.||.||.||||||||||||||.||||||||.||.||||||||||||||.||||||||||||||.||||
Sbjct  591  GCCGGCGCATCTACTGCGCCACCGGCAAAGCCACTCCGGTGAGAAGCCGCACGCGTGCCCTGAGTGCGGCAAGG  664

Query  641  CCTTTCGGCGCAAGGAGCACCTGCGGCGCCACCGCGACACGCACCCCGGCAGCCCCGGCAGCCCCGGGCCCGCG  714
            |.||.|||||.|||||||||||||||||||||||||.||||||         ||||||||||||.|||||.||.
Sbjct  665  CATTCCGGCGTAAGGAGCACCTGCGGCGCCACCGCGGCACGCA---------CCCCGGCAGCCCAGGGCCTGCA  729

Query  715  CTGCGCCCTCTGCCCGCCCGTGAGAAGCCCCACGCGTGCTGCGAGTGTGGCAAGACCTTCTACTGGCGCGAGCA  788
            ||||||||.|||||.||.||.||||||||.||||||||||||||.||.||||||||||||||||||||||||||
Sbjct  730  CTGCGCCCCCTGCCTGCGCGCGAGAAGCCGCACGCGTGCTGCGAATGCGGCAAGACCTTCTACTGGCGCGAGCA  803

Query  789  CCTGGTGCGCCACCGCAAGACGCACTCGGGAGCGCGGCCCTTTGCCTGCTGGGAGTGTGGCAAGGGCTTCGGGC  862
            |||||||||||||||||||||.|||||.||.|||||.||.||.|||||||||||.||||||||||||||||||.
Sbjct  804  CCTGGTGCGCCACCGCAAGACACACTCTGGCGCGCGACCTTTCGCCTGCTGGGAATGTGGCAAGGGCTTCGGGA  877

Query  863  GCCGCGAGCACGTGCTGCGCCACCAGCGCATCCACGGCCGGGCAGCGGCCAGC----GCGCAGGGGGCGGTAGC  932
            |.||.|||||.|||||.||.||||||||.|||||.||||||   |||||| ||    ||.||.|||.|...|||
Sbjct  878  GGCGTGAGCATGTGCTCCGTCACCAGCGTATCCATGGCCGG---GCGGCC-GCGGTAGCTCAAGGGACTTCAGC  947

Query  933  TCCGGGCCCGGATGGTGGAGGCCCCTTCCCGCCCT-GGCCCTTGGGT  978
            .||.||.||.||.|||||.||..||||.||||||| |||.||.||| 
Sbjct  948  ACCAGGTCCAGAGGGTGGTGGTGCCTTTCCGCCCTGGGCTCTGGGG-  993