Nucleotide Global Alignment

Description

Query:
TRCN0000467805
Subject:
XM_024453468.1
Aligned Length:
2853
Identities:
1929
Gaps:
912

Alignment

Query    1  ATGAACTTGGGAGATGGTTTAAAGCTTGAAACTGAATTACTGGATGGAAAAACCAAGCTAATATTGTCTCCATA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGAACATAAATCAAAAATTTCTGTGAAGATGGGAAATAAGGCCAAGATTGCAAAATGTCCTTTAAGAACAAAAA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CTGGGCACATTCTAAAATCAACACAAGATACTTGTATTGGGAGTGAAAAACTTTTGCAAAAGAAGCCAGTTGGT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TCAGAAACATCACAGGCAAAAGGTGAAAAAAATGGAATGACTTTTTCATCCACTAAGGATTTATGTAAACAATG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TATAGATAAAGACTGTCTTCATATCCAGAAAGAGATTTCACCTGCAACTCCTAATATGCAGAAGACTAGAAACA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CCGTAAATACATCTCTAGTAGGTAAACAGAAGCCTCACAAAAAACACATCACAGCTGAAAACATGAAGAGCAGT  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  TTGGTGTGTCTAACACAAGACCAACTACAACAGATTTTGATGACTGTAAACCAAGGAAATAGATCTCTTTCCCT  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  GACTGAGAATGGAAAGGAGGCAAAAAGTCAATATAGTCTATATTTAAACAGTATTTCTAATCAGCCAAAGGATG  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  AGAACATTATGGGATTATTCAAAAAAACTGAAATGGTTTCATCTGTCCCAGCTGAAAATAAATCTGTCTTAAAT  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  GAACATCAGGAGACATCTAAACAGTGTGAGCAAAAAATTGCCATAGAGAATGAATGGAAACCAGCTGATATATT  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  CAGTACTCTGGGGGAAAGGGAATGTGATAGAAGTTCGTTGGAAGCAAAAAAAGCCCAGTGGAGGAAAGAGCTAG  814
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  815  ATGAACAGGTTGCTTTAAAGAAGAAAGAAAAAGAAGTTTCTGAAAAATGGAATGATCCTTGGAAAAAATCTGAA  888
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  889  AGTGATAAAATAATATGGGAAAAACATCAAATT----CTTGAC-CAATCTAG-GGAAACAGTACTGCTGGAGCA  956
                          |||||..|..|| |||.||    ||.|.| .|.|.||| |||||||||||||||||||||
Sbjct    1  --------------ATGGGGCATTCA-CAACTTAGAGCTAGTCAGACTTTAGAGGAAACAGTACTGCTGGAGCA  59

Query  957  CCCTTTCAGTGCTGTGAAACAAGAACTGCAGAGAAAATGGATTGAAGAGTTGAATAAGCAAATAGAAGATGACC  1030
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct   60  CCCTTTCAGTGCTGTGAAACAAGAACTGCAAAGAAAATGGATTGAAGAGTTGAATAAGCAAATAGAAGATGACC  133

Query 1031  GTCAAAGAAAAATAGAGGAAAAAATTATATATTCAAAGGGTGAGGAACATGACAGATGGGCAATGCACTTTGAT  1104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  134  GTCAAAGAAAAATAGAGGAAAAAATTATATATTCAAAGGGTGAGGAACATGACAGATGGGCAATGCACTTTGAT  207

Query 1105  TCATTAAAGAGTTATCCTGGTTCTCAATCTCAGCTGTTCTCTCGGTCAACACACAAACAACCTGAGTACTTCTG  1178
            |||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct  208  TCATTAAAGAGTTATCCTGGTTCTCAATCTCAGCTGTTCTCTCAGTCAACACACAAACAACCTGAGTACTTCTG  281

Query 1179  TGTCTCTCCTGACACTCAGGAGCTGGCTGATGTCAGCAGTGTTTGTACACCTACAACCGGAAGCCAGGTTGAAC  1252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  282  TGTCTCTCCTGACACTCAGGAGCTGGCTGATGTCAGCAGTGTTTGTACACCTACAACCGGAAGCCAGGTTGAAC  355

Query 1253  CTTCAGAGGAGGAGCATATAGCAAAACCTATTAAGGATGTGGTTATGGCAAACAGTAAGAAAACAAACTTTCTC  1326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  356  CTTCAGAGGAGGAGCATATAGCAAAACCTATTAAGGATGTGGTTATGGCAAACAGTAAGAAAACAAACTTTCTC  429

Query 1327  CGTTCTATGACTGCTCTCTTGGACCCAGCTCAGATTGAGGAACGAGACAGACGACGACAAAAACAATTAGAGCA  1400
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  430  CGTTCTATGACTGCTCTCTTGGACCCAGCTCAGATTGAGGAACGAGACAGACGACGACAAAAACAATTAGAGCA  503

Query 1401  TCAGAAAGCCATCACTGCCCAGGTAGAAGAGAAGCGCAGGAAGAAACAACTGGAGGAAGAGCAAAGAAAGAAGG  1474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  504  TCAGAAAGCCATCACTGCCCAGGTAGAAGAGAAGCGCAGGAAGAAACAACTGGAGGAAGAGCAAAGAAAGAAGG  577

Query 1475  AAGAACAAGAAGAGGAGCTTCGCTTAGCACAGGAACGTGAAGAGATGCAGAAACAGTATGAAGAAGACATACTT  1548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  578  AAGAACAAGAAGAGGAGCTTCGCTTAGCACAGGAACGTGAAGAGATGCAGAAACAGTATGAAGAAGACATACTT  651

Query 1549  AAGCAAAAACAAAAGGAAGAAATCATGACTCTCAAGACAAATGAGCTATTCCAGACAATGCAGCGAGCACAGGA  1622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  652  AAGCAAAAACAAAAGGAAGAAATCATGACTCTCAAGACAAATGAGCTATTCCAGACAATGCAGCGAGCACAGGA  725

Query 1623  ACTGGCACAGAGACTAAAACAAGAACAAAGAATCCGAGAATTGGCGCAAAAGGGACATGACACTTCTAGACTGA  1696
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  726  ACTGGCACAGAGACTAAAACAAGAACAAAGAATCCGAGAATTGGCGCAAAAGGGACATGACACTTCTAGACTGA  799

Query 1697  TTAAAAATCTTGGTGTTGATACAATACAAATGGAATATAATGCATCTAACATTTCAAATTCAAGACATGATTCT  1770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  800  TTAAAAATCTTGGTGTTGATACAATACAAATGGAATATAATGCATCTAACATTTCAAATTCAAGACATGATTCT  873

Query 1771  GATGAAATCAGTGGTAAAATGAATACATATATGAATTCTACGACTTCTTCTAAGAAGGATACTGGTGTGCAAAC  1844
            |||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||
Sbjct  874  GATGAAATCAGTGGTAAAATGAATACATATATGAATTCTACGA---CTTCTAAGAAGGATACTGGTGTGCAAAC  944

Query 1845  AGATGACTTAAATATAGGAATATTCACCAATGCAGAATCACATTGTGGATCATTAATGGAGAGGGACATCACAA  1918
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  945  AGATGACTTAAATATAGGAATATTCACCAATGCAGAATCACATTGTGGATCATTAATGGAGAGGGACATCACAA  1018

Query 1919  ATTGTTCATCTCCTGAGATTTCGGCAGAACTTATTGGACAGTTTAGCACCAAGAAAAACAAGCAAGAACTAACT  1992
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019  ATTGTTCATCTCCTGAGATTTCGGCAGAACTTATTGGACAGTTTAGCACCAAGAAAAACAAGCAAGAACTAACT  1092

Query 1993  CAGGATAAAGGAGCCAGCTTAGAAAAAGAAAACAATCGGTGTAATGACCAGTGTAATCAGTTCACAAGAATAGA  2066
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1093  CAGGATAAAGGAGCCAGCTTAGAAAAAGAAAACAATCGGTGTAATGACCAGTGTAATCAGTTCACAAGAATAGA  1166

Query 2067  GAAACAAACAAAACACATGAAGAAATATCCTAAAAGGCCTGATTGGAATATAAATAAGCCACCTAAAAGGTATA  2140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1167  GAAACAAACAAAACACATGAAGAAATATCCTAAAAGGCCTGATTGGAATATAAATAAGCCACCTAAAAGGTATA  1240

Query 2141  TTCCAGCATCAGAAAAGTACCCTAAACAGCTTCAAAAGCAGAGAGAAGAAAAAAAAGTAAGGAGGCAGATGGAA  2214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1241  TTCCAGCATCAGAAAAGTACCCTAAACAGCTTCAAAAGCAGAGAGAAGAAAAAAAAGTAAGGAGGCAGATGGAA  1314

Query 2215  TTGCTTCATTTGGTAGAAAAAAATAATCCTGGGCACCTCTCTCAAAACAGAGGCATTTCACCAGAAATTTTTCA  2288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315  TTGCTTCATTTGGTAGAAAAAAATAATCCTGGGCACCTCTCTCAAAACAGAGGCATTTCACCAGAAATTTTTCA  1388

Query 2289  TTCATCTCATCAAGAAACGGAGTCAAAGTTGAGGTGGCATCTAGTCAAAAAGGAAGAAGAGCCTCTGAATATTC  2362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1389  TTCATCTCATCAAGAAACGGAGTCAAAGTTGAGGTGGCATCTAGTCAAAAAGGAAGAAGAGCCTCTGAATATTC  1462

Query 2363  ATTCATTCAGCAAGGAAAGGTCTCCATCATCACCAGTTCCAGTAGTGAAAAACAGAACCCAACAAACTCAAAAT  2436
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1463  ATTCATTCAGCAAGGAAAGGTCTCCATCATCACCAGTTCCAGTAGTGAAAAACAGAACCCAACAAACTCAAAAT  1536

Query 2437  ACATTACATTTACCACTAAAAAACAGTAGCTATGAGAGAGAGAATTTGATCTCAGGAAGTAATCAAACAGAATT  2510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1537  ACATTACATTTACCACTAAAAAACAGTAGCTATGAGAGAGAGAATTTGATCTCAGGAAGTAATCAAACAGAATT  1610

Query 2511  ATCATCTGGGATTTCTGAATCATCCCATTTTATTCCGTATGTTCGAACAAATGAGATCTATTACCTTGATCCCG  2584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1611  ATCATCTGGGATTTCTGAATCATCCCATTTTATTCCGTATGTTCGAACAAATGAGATCTATTACCTTGATCCCG  1684

Query 2585  ATGCACCATTGTCTGGGCCTTCAACCCAGGACCCTCAGTACCAAAATTCACAAGACTGTGGCCAAAAACGACAG  2658
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1685  ATGCACCATTGTCTGGGCCTTCAACCCAGGACCCTCAGTACCAAAATTCACAAGACTGTGGCCAAAAACGACAG  1758

Query 2659  CTATTTGATTCTGACTGTGTCAGGGATCCACTTCTTAATCCTAACATGGTGAAAAATAGGGATCGACAGCAAGC  2732
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1759  CTATTTGATTCTGACTGTGTCAGGGATCCACTTCTTAATCCTAACATGGTGAAAAATAGGGATCGACAGCAAGC  1832

Query 2733  AATCCTTAAGGGACTTTCAGAACTGAGACAGGGCCTTCTCCAGAAGCAAAAGGAGTTGGAAAGTAGTCTCCTGC  2806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1833  AATCCTTAAGGGACTTTCAGAACTGAGACAGGGCCTTCTCCAGAAGCAAAAGGAGTTGGAAAGTAGTCTCCTGC  1906

Query 2807  CTTTAGCTGAAAATCAAGAAGAGAGTTTTGGTTCTTCATTT  2847
            |||||||||||||||||||||||||||||||||||||||||
Sbjct 1907  CTTTAGCTGAAAATCAAGAAGAGAGTTTTGGTTCTTCATTT  1947

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