Nucleotide Global Alignment
Description
- Query:
- TRCN0000467805
- Subject:
- XM_024453470.1
- Aligned Length:
- 2865
- Identities:
- 1751
- Gaps:
- 1113
Alignment
Query 1 ATGAACTTGGGAGATGGTTTAAAGCTTGAAACTGAATTACTGGATGGAAAAACCAAGCTAATATTGTCTCCATA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGAACATAAATCAAAAATTTCTGTGAAGATGGGAAATAAGGCCAAGATTGCAAAATGTCCTTTAAGAACAAAAA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CTGGGCACATTCTAAAATCAACACAAGATACTTGTATTGGGAGTGAAAAACTTTTGCAAAAGAAGCCAGTTGGT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCAGAAACATCACAGGCAAAAGGTGAAAAAAATGGAATGACTTTTTCATCCACTAAGGATTTATGTAAACAATG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TATAGATAAAGACTGTCTTCATATCCAGAAAGAGATTTCACCTGCAACTCCTAATATGCAGAAGACTAGAAACA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CCGTAAATACATCTCTAGTAGGTAAACAGAAGCCTCACAAAAAACACATCACAGCTGAAAACATGAAGAGCAGT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TTGGTGTGTCTAACACAAGACCAACTACAACAGATTTTGATGACTGTAAACCAAGGAAATAGATCTCTTTCCCT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GACTGAGAATGGAAAGGAGGCAAAAAGTCAATATAGTCTATATTTAAACAGTATTTCTAATCAGCCAAAGGATG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AGAACATTATGGGATTATTCAAAAAAACTGAAATGGTTTCATCTGTCCCAGCTGAAAATAAATCTGTCTTAAAT 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GAACATCAGGAGACATCTAAACAGTGTGAGCAAAAAATTGCCATAGAGAATGAATGGAAACCAGCTGATATATT 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CAGTACTCTGGGGGAAAGGGAATGTGATAGAAGTTCGTTGGAAGCAAAAAAAGCCCAGTGGAGGAAAGAGCTAG 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 ATGAACAGGTTGCTTTAAAGAAGAAAGAAAAAGAAGTTTCTGAAAAATGGAATGATCCTTGGAAAAAATCTGAA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 AGTGATAAAATAATATGGGAAAAACATCAAATTCTTGACCAATCTAGGGAAACAGTACTGCTGGAGCACCCTTT 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 CAGTGCTGTGAAACAAGAACTGCAGAGAAAATGGATTGAAGAGTTGAATAAGCAAATAGAAGATGACCGTCAAA 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 GAAAAATAGAGGAAAAAATTATATATTCAAAGGGTGAGGAACATGACAGATGGGCAATGCACTTTGATTCATTA 1110
||||||||||||||||||
Sbjct 1 --------------------------------------------------------ATGCACTTTGATTCATTA 18
Query 1111 AAGAGTTATCCTGGTTCTCAATCTCAGCTGTTCTCTCGGTCAACACACAAACAACCTGAGTACTTCTGTGTCTC 1184
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 19 AAGAGTTATCCTGGTTCTCAATCTCAGCTGTTCTCTCAGTCAACACACAAACAACCTGAGTACTTCTGTGTCTC 92
Query 1185 TCCTGACACTCAGGAGCTGGCTGATGTCAGCAGTGTTTGTACACCTACAACCGGAAGCCAGGTTGAACCTTCAG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 93 TCCTGACACTCAGGAGCTGGCTGATGTCAGCAGTGTTTGTACACCTACAACCGGAAGCCAGGTTGAACCTTCAG 166
Query 1259 AGGAGGAGCATATAGCAAAACCTATTAAGGATGTGGTTATGGCAAACAGTAAGAAAACAAACTTTCTCCGTTCT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 167 AGGAGGAGCATATAGCAAAACCTATTAAGGATGTGGTTATGGCAAACAGTAAGAAAACAAACTTTCTCCGTTCT 240
Query 1333 ATGACTGCTCTCTTGGACCCAGCTCAGATTGAGGAACGAGACAGACGACGACAAAAACAATTAGAGCATCAGAA 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 ATGACTGCTCTCTTGGACCCAGCTCAGATTGAGGAACGAGACAGACGACGACAAAAACAATTAGAGCATCAGAA 314
Query 1407 AGCCATCACTGCCCAGGTAGAAGAGAAGCGCAGGAAGAAACAACTGGAGGAAGAGCAAAGAAAGAAGGAAGAAC 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 315 AGCCATCACTGCCCAGGTAGAAGAGAAGCGCAGGAAGAAACAACTGGAGGAAGAGCAAAGAAAGAAGGAAGAAC 388
Query 1481 AAGAAGAGGAGCTTCGCTTAGCACAGGAACGTGAAGAGATGCAGAAACAGTATGAAGAAGACATACTTAAGCAA 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 389 AAGAAGAGGAGCTTCGCTTAGCACAGGAACGTGAAGAGATGCAGAAACAGTATGAAGAAGACATACTTAAGCAA 462
Query 1555 AAACAAAAGGAAGAAATCATGACTCTCAAGACAAATGAGCTATTCCAGACAATGCAGCGAGCACAGGAACTGGC 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 463 AAACAAAAGGAAGAAATCATGACTCTCAAGACAAATGAGCTATTCCAGACAATGCAGCGAGCACAGGAACTGGC 536
Query 1629 ACAGAGACTAAAACAAGAACAAAGAATCCGAGAATTGGCGCAAAAGGGACATGACACTTCTAGACTGATTAAAA 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 ACAGAGACTAAAACAAGAACAAAGAATCCGAGAATTGGCGCAAAAGGGACATGACACTTCTAGACTGATTAAAA 610
Query 1703 ATCTTGGT------------------GTTGATACAATACAAATGGAATATAATGCATCTAACATTTCAAATTCA 1758
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 611 ATCTTGGTGGTGATTTCTCTTTGCCAGTTGATACAATACAAATGGAATATAATGCATCTAACATTTCAAATTCA 684
Query 1759 AGACATGATTCTGATGAAATCAGTGGTAAAATGAATACATATATGAATTCTACGACTTCTTCTAAGAAGGATAC 1832
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 685 AGACATGATTCTGATGAAATCAGTGGTAAAATGAATACATATATGAATTCTACGA---CTTCTAAGAAGGATAC 755
Query 1833 TGGTGTGCAAACAGATGACTTAAATATAGGAATATTCACCAATGCAGAATCACATTGTGGATCATTAATGGAGA 1906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 756 TGGTGTGCAAACAGATGACTTAAATATAGGAATATTCACCAATGCAGAATCACATTGTGGATCATTAATGGAGA 829
Query 1907 GGGACATCACAAATTGTTCATCTCCTGAGATTTCGGCAGAACTTATTGGACAGTTTAGCACCAAGAAAAACAAG 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 830 GGGACATCACAAATTGTTCATCTCCTGAGATTTCGGCAGAACTTATTGGACAGTTTAGCACCAAGAAAAACAAG 903
Query 1981 CAAGAACTAACTCAGGATAAAGGAGCCAGCTTAGAAAAAGAAAACAATCGGTGTAATGACCAGTGTAATCAGTT 2054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 904 CAAGAACTAACTCAGGATAAAGGAGCCAGCTTAGAAAAAGAAAACAATCGGTGTAATGACCAGTGTAATCAGTT 977
Query 2055 CACAAGAATAGAGAAACAAACAAAACACATGAAGAAATATCCTAAAAGGCCTGATTGGAATATAAATAAGCCAC 2128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 978 CACAAGAATAGAGAAACAAACAAAACACATGAAGAAATATCCTAAAAGGCCTGATTGGAATATAAATAAGCCAC 1051
Query 2129 CTAAAAGGTATATTCCAGCATCAGAAAAGTACCCTAAACAGCTTCAAAAGCAGAGAGAAGAAAAAAAAGTAAGG 2202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1052 CTAAAAGGTATATTCCAGCATCAGAAAAGTACCCTAAACAGCTTCAAAAGCAGAGAGAAGAAAAAAAAGTAAGG 1125
Query 2203 AGGCAGATGGAATTGCTTCATTTGGTAGAAAAAAATAATCCTGGGCACCTCTCTCAAAACAGAGGCATTTCACC 2276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1126 AGGCAGATGGAATTGCTTCATTTGGTAGAAAAAAATAATCCTGGGCACCTCTCTCAAAACAGAGGCATTTCACC 1199
Query 2277 AGAAATTTTTCATTCATCTCATCAAGAAACGGAGTCAAAGTTGAGGTGGCATCTAGTCAAAAAGGAAGAAGAGC 2350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 AGAAATTTTTCATTCATCTCATCAAGAAACGGAGTCAAAGTTGAGGTGGCATCTAGTCAAAAAGGAAGAAGAGC 1273
Query 2351 CTCTGAATATTCATTCATTCAGCAAGGAAAGGTCTCCATCATCACCAGTTCCAGTAGTGAAAAACAGAACCCAA 2424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1274 CTCTGAATATTCATTCATTCAGCAAGGAAAGGTCTCCATCATCACCAGTTCCAGTAGTGAAAAACAGAACCCAA 1347
Query 2425 CAAACTCAAAATACATTACATTTACCACTAAAAAACAGTAGCTATGAGAGAGAGAATTTGATCTCAGGAAGTAA 2498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1348 CAAACTCAAAATACATTACATTTACCACTAAAAAACAGTAGCTATGAGAGAGAGAATTTGATCTCAGGAAGTAA 1421
Query 2499 TCAAACAGAATTATCATCTGGGATTTCTGAATCATCCCATTTTATTCCGTATGTTCGAACAAATGAGATCTATT 2572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1422 TCAAACAGAATTATCATCTGGGATTTCTGAATCATCCCATTTTATTCCGTATGTTCGAACAAATGAGATCTATT 1495
Query 2573 ACCTTGATCCCGATGCACCATTGTCTGGGCCTTCAACCCAGGACCCTCAGTACCAAAATTCACAAGACTGTGGC 2646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1496 ACCTTGATCCCGATGCACCATTGTCTGGGCCTTCAACCCAGGACCCTCAGTACCAAAATTCACAAGACTGTGGC 1569
Query 2647 CAAAAACGACAGCTATTTGATTCTGACTGTGTCAGGGATCCACTTCTTAATCCTAACATGGTGAAAAATAGGGA 2720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1570 CAAAAACGACAGCTATTTGATTCTGACTGTGTCAGGGATCCACTTCTTAATCCTAACATGGTGAAAAATAGGGA 1643
Query 2721 TCGACAGCAAGCAATCCTTAAGGGACTTTCAGAACTGAGACAGGGCCTTCTCCAGAAGCAAAAGGAGTTGGAAA 2794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1644 TCGACAGCAAGCAATCCTTAAGGGACTTTCAGAACTGAGACAGGGCCTTCTCCAGAAGCAAAAGGAGTTGGAAA 1717
Query 2795 GTAGTCTCCTGCCTTTAGCTGAAAATCAAGAAGAGAGTTTTGGTTCTTCATTT 2847
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1718 GTAGTCTCCTGCCTTTAGCTGAAAATCAAGAAGAGAGTTTTGGTTCTTCATTT 1770
