Nucleotide Global Alignment
Description
- Query:
- TRCN0000468050
- Subject:
- XR_001748646.2
- Aligned Length:
- 5404
- Identities:
- 1587
- Gaps:
- 3805
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTCAGCTCCGACCTTGCAGCGGCGCAGCGCGGGTGGGAGGCGGGGAGGAGCAGCGGGAAGAGCGGAGCGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GACCGCGTCCGGCGCAGTCTTCAATGAGCAGCGCGGAAACTGCACCCCAGACCCGAGCCTGCTGCGCGCCCCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCAGAGCTCACCTGGTGCCAGGTAACAGGCCTGGCCTCGCCCTGTGGATGATGATGGCCTTGCCCCCGTGAGC 222
Query 1 ------------------------------------------ATGCGGCTGTGGAAGGCGGTGGTGGTGACTTT 32
||||||||||||||||||||||||||||||||
Sbjct 223 TACAACCTGGCCTTCAGCACCCGCCCACCTCCAACCAGCAGGATGCGGCTGTGGAAGGCGGTGGTGGTGACTTT 296
Query 33 GGCCTTCATGAGTGTGGACATCTGCGTGACCACGGCCATCTATGTCTTCAGCCACCTGGACCGCAGCCTCCTGG 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGCCTTCATGAGTGTGGACATCTGCGTGACCACGGCCATCTATGTCTTCAGCCACCTGGACCGCAGCCTCCTGG 370
Query 107 AGGACATCCGCCACTTCAACATCTTTGACTCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGCAGCTGCCTG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGACATCCGCCACTTCAACATCTTTGACTCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGCAGCTGCCTG 444
Query 181 CTGCTGGGAGCCACCATTGGTGTGGCCAAGAACAGTGCGCTGGGGCCCCGGCGGCTGCGGGCCTCGTGGCTGGT 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGCTGGGAGCCACCATTGGTGTGGCCAAGAACAGTGCGCTGGGGCCCCGGCGGCTGCGGGCCTCGTGGCTGGT 518
Query 255 CATCACCCTCGTGTGCCTCTTCGTGGGCATCTATGCCATGGTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGC 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CATCACCCTCGTGTGCCTCTTCGTGGGCATCTATGCCATGGTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGC 592
Query 329 CCATCCGGGACCCCTGGTTTTGGGCCCTGTTCGTGTGGACGTACATTTCACTCGGCGCATCCTTCCTGCTCTGG 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCATCCGGGACCCCTGGTTTTGGGCCCTGTTCGTGTGGACGTACATTTCACTCGGCGCATCCTTCCTGCTCTGG 666
Query 403 TGGCTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGCCAGGGGCGGCCACCGAGGCTGAGGGCTTCCC 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGCTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGCCAGGGGCGGCCACCGAGGCTGAGGGCTTCCC 740
Query 477 TGGGAGCGGCCGGCCACCGCCCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGCTCTCCTACACCAAGCCCG 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGGGAGCGGCCGGCCACCGCCCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGCTCTCCTACACCAAGCCCG 814
Query 551 ACGTGGCCTTCCTCGTGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGGGAGAGACCTTCCTGCCCTACTAC 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACGTGGCCTTCCTCGTGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGGGAGAGACCTTCCTGCCCTACTAC 888
Query 625 ACGGGCCGCGCCATTGATGGCATCGTCATCCAGAAAAGCATGGATCAGTTCAGCACGGCTGTCGTCATCGTGTG 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACGGGCCGCGCCATTGATGGCATCGTCATCCAGAAAAGCATGGATCAGTTCAGCACGGCTGTCGTCATCGTGTG 962
Query 699 CCTGCTGGCCATTGGCAGCTCATTTGCCGCAGGTATTCGGGGCGGCATTTTTACCCTCATATTTGCCAGACTGA 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCTGCTGGCCATTGGCAGCTCATTTGCCGCAGGTATTCGGGGCGGCATTTTTACCCTCATATTTGCCAGACTGA 1036
Query 773 ACATTCGCCTTCGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAGACAAGCTTCTTTGATGAGAACCGCACA 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACATTCGCCTTCGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAGACAAGCTTCTTTGATGAGAACCGCACA 1110
Query 847 GGGGACCTCATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAACATCAATGTCTT 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGGGACCTCATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAACATCAATGTCTT 1184
Query 921 CCTGCGGAACACAGTCAAGGTCACGGGCGTGGTGGTCTTCATGTTCAGCCTCTCATGGCAGCTCTCCTTGGTCA 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCTGCGGAACACAGTCAAGGTCACGGGCGTGGTGGTCTTCATGTTCAGCCTCTCATGGCAGCTCTCCTTGGTCA 1258
Query 995 CCTTCATGGGCTTCCCCATCATCATGATGGTGTCCAACATCTACGGCAAGTACTACAAGAGGCTCTCCAAAGAG 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCTTCATGGGCTTCCCCATCATCATGATGGTGTCCAACATCTACGGCAAGTACTACAAGAGGCTCTCCAAAGAG 1332
Query 1069 GTCCAGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAGCTT 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GTCCAGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAGCTT 1406
Query 1143 CGCCAATGAGGAGGAGGAGGCAGAGGTGTACCTGCGGAAGCTGCAGCAGGTGTACAAGCTGAACAGGAAGGAGG 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CGCCAATGAGGAGGAGGAGGCAGAGGTGTACCTGCGGAAGCTGCAGCAGGTGTACAAGCTGAACAGGAAGGAGG 1480
Query 1217 CAGCTGCCTACATGTACTACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCCAGGTCAGCATCCTCTACTAC 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CAGCTGCCTACATGTACTACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCCAGGTCAGCATCCTCTACTAC 1554
Query 1291 GGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAACCTCATCGCCTTCATCATCTACGAGTTTGTCCT 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAACCTCATCGCCTTCATCATCTACGAGTTTGTCCT 1628
Query 1365 GGGAGATTGTATGGAGTCCGTGGGCTCCGTCTACAGTGGCCTGATGCAGGGAGTGGGGGCTGCTGAGAAGGTGT 1438
||||||||||||||
Sbjct 1629 GGGAGATTGTATGG------------------------------------------------------------ 1642
Query 1439 TCGAGTTCATCGACCGGCAGCCGACCATGGTGCACGATGGCAGCTTGGCCCCCGACCACCTGGAGGGCCGGGTG 1512
Sbjct 1643 -------------------------------------------------------------------------- 1642
Query 1513 GACTTTGAGAATGTGACCTTCACCTACCGCACTCGGCCCCACACCCAGGTCCTGCAGAATGTCTCCTTCAGCCT 1586
|||||||||||||||||||
Sbjct 1643 -------------------------------------------------------AGAATGTCTCCTTCAGCCT 1661
Query 1587 GTCCCCCGGCAAGGTGACGGCCCTGGTGGGGCCCTCGGGCAGTGGGAAGAGCTCCTGTGTCAACATCCTGGAGA 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1662 GTCCCCCGGCAAGGTGACGGCCCTGGTGGGGCCCTCGGGCAGTGGGAAGAGCTCCTGTGTCAACATCCTGGAGA 1735
Query 1661 ACTTCTACCCCCTGGAGGGGGGCCGGGTGCTGCTGGACGGCAAGCCCATCAGCGCCTACGACCACAAGTACTTG 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1736 ACTTCTACCCCCTGGAGGGGGGCCGGGTGCTGCTGGACGGCAAGCCCATCAGCGCCTACGACCACAAGTACTTG 1809
Query 1735 CACCGTGTGGTAT-----GTG---CACGGGCCTGGGC----------------CAC-----ACTTCTCC----- 1774
|||||||||.|.| ||| ||.|.|||.|.|| ||| ||.|||||
Sbjct 1810 CACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTTCGCCCGCTCCATCACGGATAACATCTCCTACGG 1883
Query 1775 ---GCCCTTTCTGCATC--------------------------------------------------------- 1788
||||..|.|||.|.
Sbjct 1884 CCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCCCACGGCTTCATCATGGAAC 1957
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 1958 TCCAGGACGGCTACAGCACAGAGACAGGGGAGAAGGGCGCCCAGCTGTCAGGTGGCCAGAAGCAGCGGGTGGCC 2031
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2032 ATGGCCCGGGCTCTGGTGCGGAACCCCCCAGTCCTCATCCTGGATGAAGCCACCAGCGCTTTGGATGCCGAGAG 2105
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2106 CGAGTATCTGATCTGAATGACCAGCCTGCAGATATCAGAACCGAGATGGATTGATGATGATGACAATGATAACC 2179
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2180 ATTCAGTTGTCACTAAGGGCTGCTTGTTGCACCTCAGGAGCTGGGGATAGTGAAGGAGATACCTGTGCTGAGTC 2253
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2254 ACTAACAGGAAAGGGCTGAGAAAGAAGCATCGCCAATGGTTTCTCTTTCCTGGTTTTTATTCTTTCCTCAGAGA 2327
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2328 GGAGGAAGTTGACCATTTAAACAGGTGAGTTGGCTGGGCGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGG 2401
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2402 AGGCCGAGGCAGGCGGACCACTTGAGGTCAGGAGTTGGAGACCAGCCTGGCCAACATGGTGAAAACTCATCTCT 2475
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2476 ACTAAAAACACAAAAATTAGCCAGGTGTGGTGGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGA 2549
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2550 GGTGGCAGTGAGCCGAGATTGTGCCTCTGAACTCCAGCCTGGACGACAGAGTGAGACTCCATCTAAAATAAATA 2623
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2624 AATAAATAAATAAATAAATAAATAAATAAATAAACAAACAAACAGATGAGTCACCCAGGGGGAGGTCCTAACAG 2697
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2698 CGACCTAAGGTGACAGTGACAGTGCCTCACATTATTACAGCTCTTTACCTTTGACTACCTGAGATCAGTCATTC 2771
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2772 AGTAAGCATTTATTGAGAACCTCCGTCTACCAGAAACTGTGCTAGGTTGTGGGTCACAGTGGAGACTAAGAGGT 2845
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2846 CCGAGATCACCTACATCCTACTGGGTAATAAACTCCAGATGGTGAAAAGATGGCAGCAGACAAGAGAGTGACTT 2919
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2920 GGGAGAGGAGCACTGTTTGAGCTGGGGTGGTCTGGGGAGGTGATATGGGAGCTGAGCCCTGAATGACAAGGAGG 2993
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2994 TACCAGCTTTGGGTATCTAGAGGAAAGAATGATCCCAACCACAGTCTGGCACTTCCTCAAAAAGCTCAACATGG 3067
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3068 ACCTGGGCACAGTGGCTCACAGTTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGAGGATTGCTTGAAGCCAG 3141
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3142 GAGTTTGAGAACAGCCTGGGCAACATAGTGGGACCCCATCCCTACAAAAATTTAAAAATCAGCCAGGCGTGGTA 3215
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3216 GTGCATACCGGTCGTCCCAGCTACTTGTGTGGCTGAGGCAGGAGGATCCTTTGAGCTCAAGGAGGTTGAGGCTG 3289
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3290 CAACGAACCATGGTGGTGCCACTGCACTCCAGCCTGGATGACAGAGTGAGACCTCGTCTCTAAAAATAATAAAA 3363
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3364 TAAAGCCAAAAAGTGCAAACAATCCAATGTATGAATGGATAAACAAACTGCAAACCGTGGTATGCACATACTGT 3437
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3438 GGGATATGATTCAGCTGTAGAAAGGAATGAAGTGCTGGTACATGCTATAACATAGATGGTCCTTAGAAGCATTA 3511
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3512 TGCAAATGAAAGATGCCAGGCAGGGAAGGTCACCTATGGTATGATTCTTTTTACATGATATATTCAGAAGAAGC 3585
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3586 AAATCTATAGGGATAGAAAGCAGATTAGAGGTTACCAGGGCATGGGGAGGGAGGAATGGGGAGTGACTGCTTGC 3659
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3660 TGGATACAAGATGTTTTTTACAGGGTGATGAGAAAGTTTGGAAGCTGGAGAGACCTGGTGTTTGCACAATATTG 3733
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3734 TGAATACATTTAATACCAATGCATTTGTACACTTTAAAATGGGTAAGTGGCCAGGTGCAATGGCTCATGCCTGT 3807
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3808 AATCCCAGCACTTTAGGAGGCCGAAGTGGGAGGATCGCTTGAGCCCAGGAGTTCGAGACCAGCCTGGGCAACAT 3881
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3882 AGGGAGACCCCATCTCTACAAAAAATAAAATATTAGTCGTGCGTGGTGGCCTGTGCCTATAGTCCCAGTTACTT 3955
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3956 CACAGACTGAGGGGGGATGATTGCTGGGCCCAGGAGTTTGAGGCTGGAGTGAGCCATGATTGTACCACTGCACT 4029
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4030 TCAGCCTGGGTGACAGATTGAGACTCTGTCTCAAAAATAAAAAAGAAAAAAAGGTTAAGTGCATGTCATGTGAA 4103
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4104 TTTCACCTCATCAAGGAAAAAAAAAAAAGATAAGTAGGGGAGGAGATGGATCCCACAAAGGATTGTGAAGTACA 4177
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4178 GAGACCTCCAGACAGCAAGAGGTGGGACATCTGCCAAGCAGGACACGGCCAGGGGACAGAGTGGGGGGCACCCA 4251
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4252 AGGGAGGAAGGAGGAGGGGACAGGAAGGCGAGGGCTCCTGGGGCCATGGCGAGGTAGTTGACTTTTATTTCATG 4325
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4326 AAAACTGGGGGCATTGAAGGGTTCTGATCAGGGCGTGACCTGATTGATCCTTGGGCTCAGTGTGGAGAAGGTAC 4399
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4400 TGGACGAGGACCCAGAGAAGTGGCTCCCCCAACACCCCGGGCAGCCAGGCCTGGGCTCACCCCACTCTGTAGAT 4473
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4474 AAGGAAATGCTGCCTGCAGAGGCTGCAGCCACGGTCTCATCGCCAAACCTTCTGCAACCCTTATTCAGCATGTC 4547
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4548 CTGCTGTTATTTATAGCTGAAGGAACCTTGCGAGTGGAGGGTGCATGGAGAAATGCTTCAAGGAATTTTCTGCT 4621
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4622 CTGCATACAGCAACAAGCAGTGGCCAGCAAGGGCCCCGGGGCAGCAGCACAGGCCCACACAGACATGCAATAGA 4695
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4696 GGTCCTTTACCTCCCCTGGACCCAGGTCCATGCTGGGCACGCCCTGGCTGGGAAGAACTAATTCAGGGCAGTTA 4769
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4770 CACAAGCGCTGCCCGAGGCCCTGTGTTGACAAGGCCTGGTCAGCTGCCAGATAAATTCCTTACCTCTGGTCCTT 4843
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4844 AATGATCTGGCTTTTCTGGACAATCCATGGCCTAAAGAAAGGGAAGATTCTTTTCAAACTGGAGCCTGGCTGGA 4917
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4918 GGCCATGAGACCGTAGTGGTGACTGATGTGTGCTGGCTCTGGCTGAGGACAGGCTTCTCCAGAACAGGAAGATG 4991
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4992 GCTGCTTTGGGGACATCTGGATTGGACATCCTTCATGCCCCACTGCCACCAGGCAGTCTCCCCTGATTTCTCAC 5065
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 5066 TACCATAGCTGGTCTCCTCCATCTTCATTTATTTGGCCTGTGTGGGCTTTTCTAGCATGTTGTTTGCTCTTCAA 5139
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 5140 ACACTCTAGGAATTTCTTAAAGGCTGGTACCTGTGTCCTCATGTAGCAGGTGTGCTCCCTGCTCACAGTAGGTG 5213
Query 1789 -- 1788
Sbjct 5214 CT 5215
