Nucleotide Global Alignment
Description
- Query:
- TRCN0000468050
- Subject:
- XR_429086.4
- Aligned Length:
- 5404
- Identities:
- 1776
- Gaps:
- 3616
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTCTCAGCTCCGACCTTGCAGCGGCGCAGCGCGGGTGGGAGGCGGGGAGGAGCAGCGGGAAGAGCGGAGCGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GACCGCGTCCGGCGCAGTCTTCAATGAGCAGCGCGGAAACTGCACCCCAGACCCGAGCCTGCTGCGCGCCCCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCAGAGCTCACCTGGTGCCAGGTAACAGGCCTGGCCTCGCCCTGTGGATGATGATGGCCTTGCCCCCGTGAGC 222
Query 1 ------------------------------------------ATGCGGCTGTGGAAGGCGGTGGTGGTGACTTT 32
||||||||||||||||||||||||||||||||
Sbjct 223 TACAACCTGGCCTTCAGCACCCGCCCACCTCCAACCAGCAGGATGCGGCTGTGGAAGGCGGTGGTGGTGACTTT 296
Query 33 GGCCTTCATGAGTGTGGACATCTGCGTGACCACGGCCATCTATGTCTTCAGCCACCTGGACCGCAGCCTCCTGG 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGCCTTCATGAGTGTGGACATCTGCGTGACCACGGCCATCTATGTCTTCAGCCACCTGGACCGCAGCCTCCTGG 370
Query 107 AGGACATCCGCCACTTCAACATCTTTGACTCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGCAGCTGCCTG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGACATCCGCCACTTCAACATCTTTGACTCGGTGCTGGATCTCTGGGCAGCCTGCCTGTACCGCAGCTGCCTG 444
Query 181 CTGCTGGGAGCCACCATTGGTGTGGCCAAGAACAGTGCGCTGGGGCCCCGGCGGCTGCGGGCCTCGTGGCTGGT 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGCTGGGAGCCACCATTGGTGTGGCCAAGAACAGTGCGCTGGGGCCCCGGCGGCTGCGGGCCTCGTGGCTGGT 518
Query 255 CATCACCCTCGTGTGCCTCTTCGTGGGCATCTATGCCATGGTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGC 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CATCACCCTCGTGTGCCTCTTCGTGGGCATCTATGCCATGGTGAAGCTGCTGCTCTTCTCAGAGGTGCGCAGGC 592
Query 329 CCATCCGGGACCCCTGGTTTTGGGCCCTGTTCGTGTGGACGTACATTTCACTCGGCGCATCCTTCCTGCTCTGG 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCATCCGGGACCCCTGGTTTTGGGCCCTGTTCGTGTGGACGTACATTTCACTCGGCGCATCCTTCCTGCTCTGG 666
Query 403 TGGCTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGCCAGGGGCGGCCACCGAGGCTGAGGGCTTCCC 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGCTGCTGTCCACCGTGCGGCCAGGCACCCAGGCCCTGGAGCCAGGGGCGGCCACCGAGGCTGAGGGCTTCCC 740
Query 477 TGGGAGCGGCCGGCCACCGCCCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGCTCTCCTACACCAAGCCCG 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGGGAGCGGCCGGCCACCGCCCGAGCAGGCGTCTGGGGCCACGCTGCAGAAGCTGCTCTCCTACACCAAGCCCG 814
Query 551 ACGTGGCCTTCCTCGTGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGGGAGAGACCTTCCTGCCCTACTAC 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACGTGGCCTTCCTCGTGGCCGCCTCCTTCTTCCTCATCGTGGCAGCTCTGGGAGAGACCTTCCTGCCCTACTAC 888
Query 625 ACGGGCCGCGCCATTGATGGCATCGTCATCCAGAAAAGCATGGATCAGTTCAGCACGGCTGTCGTCATCGTGTG 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACGGGCCGCGCCATTGATGGCATCGTCATCCAGAAAAGCATGGATCAGTTCAGCACGGCTGTCGTCATCGTGTG 962
Query 699 CCTGCTGGCCATTGGCAGCTCATTTGCCGCAGGTATTCGGGGCGGCATTTTTACCCTCATATTTGCCAGACTGA 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCTGCTGGCCATTGGCAGCTCATTTGCCGCAGGTATTCGGGGCGGCATTTTTACCCTCATATTTGCCAGACTGA 1036
Query 773 ACATTCGCCTTCGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAGACAAGCTTCTTTGATGAGAACCGCACA 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACATTCGCCTTCGAAACTGTCTCTTCCGCTCACTGGTGTCCCAGGAGACAAGCTTCTTTGATGAGAACCGCACA 1110
Query 847 GGGGACCTCATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAACATCAATGTCTT 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGGGACCTCATCTCCCGCCTGACCTCGGACACCACCATGGTCAGCGACCTGGTCTCCCAGAACATCAATGTCTT 1184
Query 921 CCTGCGGAACACAGTCAAGGTCACGGGCGTGGTGGTCTTCATGTTCAGCCTCTCATGGCAGCTCTCCTTGGTCA 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCTGCGGAACACAGTCAAGGTCACGGGCGTGGTGGTCTTCATGTTCAGCCTCTCATGGCAGCTCTCCTTGGTCA 1258
Query 995 CCTTCATGGGCTTCCCCATCATCATGATGGTGTCCAACATCTACGGCAAGTACTACAAGAGGCTCTCCAAAGAG 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCTTCATGGGCTTCCCCATCATCATGATGGTGTCCAACATCTACGGCAAGTACTACAAGAGGCTCTCCAAAGAG 1332
Query 1069 GTCCAGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAGCTT 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GTCCAGAATGCCCTGGCCAGAGCGAGCAACACGGCGGAGGAGACCATCAGTGCCATGAAGACTGTCCGGAGCTT 1406
Query 1143 CGCCAATGAGGAGGAGGAGGCAGAGGTGTACCTGCGGAAGCTGCAGCAGGTGTACAAGCTGAACAGGAAGGAGG 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CGCCAATGAGGAGGAGGAGGCAGAGGTGTACCTGCGGAAGCTGCAGCAGGTGTACAAGCTGAACAGGAAGGAGG 1480
Query 1217 CAGCTGCCTACATGTACTACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCCAGGTCAGCATCCTCTACTAC 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CAGCTGCCTACATGTACTACGTCTGGGGCAGCGGGCTCACACTGCTGGTGGTCCAGGTCAGCATCCTCTACTAC 1554
Query 1291 GGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAACCTCATCGCCTTCATCATCTACGAGTTTGTCCT 1364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGGGGCCACCTTGTCATCTCAGGCCAGATGACCAGCGGCAACCTCATCGCCTTCATCATCTACGAGTTTGTCCT 1628
Query 1365 GGGAGATTGTATGGAGTCCGTGGGCTCCGTCTACAGTGGCCTGATGCAGGGAGTGGGGGCTGCTGAGAAGGTGT 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGGAGATTGTATGGAGTCCGTGGGCTCCGTCTACAGTGGCCTGATGCAGGGAGTGGGGGCTGCTGAGAAGGTGT 1702
Query 1439 TCGAGTTCATCGACCGGCAGCCGACCATGGTGCACGATGGCAGCTTGGCCCCCGACCACCTGGAGGGCCGGGTG 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCGAGTTCATCGACCGGCAGCCGACCATGGTGCACGATGGCAGCTTGGCCCCCGACCACCTGGAGGGCCGGGTG 1776
Query 1513 GACTTTGAGAATGTGACCTTCACCTACCGCACTCGGCCCCACACCCAGGTCCTGCAGAATGTCTCCTTCAGCCT 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GACTTTGAGAATGTGACCTTCACCTACCGCACTCGGCCCCACACCCAGGTCCTGCAGAATGTCTCCTTCAGCCT 1850
Query 1587 GTCCCCCGGCAAGGTGACGGCCCTGGTGGGGCCCTCGGGCAGTGGGAAGAGCTCCTGTGTCAACATCCTGGAGA 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GTCCCCCGGCAAGGTGACGGCCCTGGTGGGGCCCTCGGGCAGTGGGAAGAGCTCCTGTGTCAACATCCTGGAGA 1924
Query 1661 ACTTCTACCCCCTGGAGGGGGGCCGGGTGCTGCTGGACGGCAAGCCCATCAGCGCCTACGACCACAAGTACTTG 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 ACTTCTACCCCCTGGAGGGGGGCCGGGTGCTGCTGGACGGCAAGCCCATCAGCGCCTACGACCACAAGTACTTG 1998
Query 1735 CACCGTGTGGTAT-----GTG---CACGGGCCTGGGC----------------CAC-----ACTTCTCC----- 1774
|||||||||.|.| ||| ||.|.|||.|.|| ||| ||.|||||
Sbjct 1999 CACCGTGTGATCTCCCTGGTGAGCCAGGAGCCCGTGCTGTTCGCCCGCTCCATCACGGATAACATCTCCTACGG 2072
Query 1775 ---GCCCTTTCTGCATC--------------------------------------------------------- 1788
||||..|.|||.|.
Sbjct 2073 CCTGCCCACTGTGCCTTTCGAGATGGTGGTGGAGGCCGCACAGAAGGCCAATGCCCACGGCTTCATCATGGAAC 2146
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2147 TCCAGGACGGCTACAGCACAGAGACAGGGGAGAAGGGCGCCCAGCTGTCAGGTGGCCAGAAGCAGCGGGTGGCC 2220
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2221 ATGGCCCGGGCTCTGGTGCGGAACCCCCCAGTCCTCATCCTGGATGAAGCCACCAGCGCTTTGGATGCCGAGAG 2294
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2295 CGAGTATCTGATCTGAATGACCAGCCTGCAGATATCAGAACCGAGATGGATTGATGATGATGACAATGATAACC 2368
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2369 ATTCAGTTGTCACTAAGGGCTGCTTGTTGCACCTCAGGAGCTGGGGATAGTGAAGGAGATACCTGTGCTGAGTC 2442
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2443 ACTAACAGGAAAGGGCTGAGAAAGAAGCATCGCCAATGGTTTCTCTTTCCTGGTTTTTATTCTTTCCTCAGAGA 2516
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2517 GGAGGAAGTTGACCATTTAAACAGGTGAGTTGGCTGGGCGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGG 2590
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2591 AGGCCGAGGCAGGCGGACCACTTGAGGTCAGGAGTTGGAGACCAGCCTGGCCAACATGGTGAAAACTCATCTCT 2664
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2665 ACTAAAAACACAAAAATTAGCCAGGTGTGGTGGGGAGGCTGAGGCAGGAGAATCACTTGAACCCGGGAGGCAGA 2738
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2739 GGTGGCAGTGAGCCGAGATTGTGCCTCTGAACTCCAGCCTGGACGACAGAGTGAGACTCCATCTAAAATAAATA 2812
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2813 AATAAATAAATAAATAAATAAATAAATAAATAAACAAACAAACAGATGAGTCACCCAGGGGGAGGTCCTAACAG 2886
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2887 CGACCTAAGGTGACAGTGACAGTGCCTCACATTATTACAGCTCTTTACCTTTGACTACCTGAGATCAGTCATTC 2960
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 2961 AGTAAGCATTTATTGAGAACCTCCGTCTACCAGAAACTGTGCTAGGTTGTGGGTCACAGTGGAGACTAAGAGGT 3034
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3035 CCGAGATCACCTACATCCTACTGGGTAATAAACTCCAGATGGTGAAAAGATGGCAGCAGACAAGAGAGTGACTT 3108
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3109 GGGAGAGGAGCACTGTTTGAGCTGGGGTGGTCTGGGGAGGTGATATGGGAGCTGAGCCCTGAATGACAAGGAGG 3182
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3183 TACCAGCTTTGGGTATCTAGAGGAAAGAATGATCCCAACCACAGTCTGGCACTTCCTCAAAAAGCTCAACATGG 3256
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3257 ACCTGGGCACAGTGGCTCACAGTTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGAGGATTGCTTGAAGCCAG 3330
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3331 GAGTTTGAGAACAGCCTGGGCAACATAGTGGGACCCCATCCCTACAAAAATTTAAAAATCAGCCAGGCGTGGTA 3404
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3405 GTGCATACCGGTCGTCCCAGCTACTTGTGTGGCTGAGGCAGGAGGATCCTTTGAGCTCAAGGAGGTTGAGGCTG 3478
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3479 CAACGAACCATGGTGGTGCCACTGCACTCCAGCCTGGATGACAGAGTGAGACCTCGTCTCTAAAAATAATAAAA 3552
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3553 TAAAGCCAAAAAGTGCAAACAATCCAATGTATGAATGGATAAACAAACTGCAAACCGTGGTATGCACATACTGT 3626
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3627 GGGATATGATTCAGCTGTAGAAAGGAATGAAGTGCTGGTACATGCTATAACATAGATGGTCCTTAGAAGCATTA 3700
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3701 TGCAAATGAAAGATGCCAGGCAGGGAAGGTCACCTATGGTATGATTCTTTTTACATGATATATTCAGAAGAAGC 3774
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3775 AAATCTATAGGGATAGAAAGCAGATTAGAGGTTACCAGGGCATGGGGAGGGAGGAATGGGGAGTGACTGCTTGC 3848
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3849 TGGATACAAGATGTTTTTTACAGGGTGATGAGAAAGTTTGGAAGCTGGAGAGACCTGGTGTTTGCACAATATTG 3922
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3923 TGAATACATTTAATACCAATGCATTTGTACACTTTAAAATGGGTAAGTGGCCAGGTGCAATGGCTCATGCCTGT 3996
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 3997 AATCCCAGCACTTTAGGAGGCCGAAGTGGGAGGATCGCTTGAGCCCAGGAGTTCGAGACCAGCCTGGGCAACAT 4070
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4071 AGGGAGACCCCATCTCTACAAAAAATAAAATATTAGTCGTGCGTGGTGGCCTGTGCCTATAGTCCCAGTTACTT 4144
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4145 CACAGACTGAGGGGGGATGATTGCTGGGCCCAGGAGTTTGAGGCTGGAGTGAGCCATGATTGTACCACTGCACT 4218
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4219 TCAGCCTGGGTGACAGATTGAGACTCTGTCTCAAAAATAAAAAAGAAAAAAAGGTTAAGTGCATGTCATGTGAA 4292
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4293 TTTCACCTCATCAAGGAAAAAAAAAAAAGATAAGTAGGGGAGGAGATGGATCCCACAAAGGATTGTGAAGTACA 4366
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4367 GAGACCTCCAGACAGCAAGAGGTGGGACATCTGCCAAGCAGGACACGGCCAGGGGACAGAGTGGGGGGCACCCA 4440
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4441 AGGGAGGAAGGAGGAGGGGACAGGAAGGCGAGGGCTCCTGGGGCCATGGCGAGGTAGTTGACTTTTATTTCATG 4514
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4515 AAAACTGGGGGCATTGAAGGGTTCTGATCAGGGCGTGACCTGATTGATCCTTGGGCTCAGTGTGGAGAAGGTAC 4588
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4589 TGGACGAGGACCCAGAGAAGTGGCTCCCCCAACACCCCGGGCAGCCAGGCCTGGGCTCACCCCACTCTGTAGAT 4662
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4663 AAGGAAATGCTGCCTGCAGAGGCTGCAGCCACGGTCTCATCGCCAAACCTTCTGCAACCCTTATTCAGCATGTC 4736
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4737 CTGCTGTTATTTATAGCTGAAGGAACCTTGCGAGTGGAGGGTGCATGGAGAAATGCTTCAAGGAATTTTCTGCT 4810
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4811 CTGCATACAGCAACAAGCAGTGGCCAGCAAGGGCCCCGGGGCAGCAGCACAGGCCCACACAGACATGCAATAGA 4884
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4885 GGTCCTTTACCTCCCCTGGACCCAGGTCCATGCTGGGCACGCCCTGGCTGGGAAGAACTAATTCAGGGCAGTTA 4958
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 4959 CACAAGCGCTGCCCGAGGCCCTGTGTTGACAAGGCCTGGTCAGCTGCCAGATAAATTCCTTACCTCTGGTCCTT 5032
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 5033 AATGATCTGGCTTTTCTGGACAATCCATGGCCTAAAGAAAGGGAAGATTCTTTTCAAACTGGAGCCTGGCTGGA 5106
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 5107 GGCCATGAGACCGTAGTGGTGACTGATGTGTGCTGGCTCTGGCTGAGGACAGGCTTCTCCAGAACAGGAAGATG 5180
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 5181 GCTGCTTTGGGGACATCTGGATTGGACATCCTTCATGCCCCACTGCCACCAGGCAGTCTCCCCTGATTTCTCAC 5254
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 5255 TACCATAGCTGGTCTCCTCCATCTTCATTTATTTGGCCTGTGTGGGCTTTTCTAGCATGTTGTTTGCTCTTCAA 5328
Query 1789 -------------------------------------------------------------------------- 1788
Sbjct 5329 ACACTCTAGGAATTTCTTAAAGGCTGGTACCTGTGTCCTCATGTAGCAGGTGTGCTCCCTGCTCACAGTAGGTG 5402
Query 1789 -- 1788
Sbjct 5403 CT 5404
