Nucleotide Global Alignment
Description
- Query:
- TRCN0000468057
- Subject:
- XR_001743373.1
- Aligned Length:
- 3270
- Identities:
- 1256
- Gaps:
- 1979
Alignment
Query 1 ------------------------------ATGGCGCCCCGAAGCCTCCTCCTGCTGCTCTCAGGGGCCCTGGC 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATATTTTTCCCAGACGCGGAGGTTGGGGTCATGGCGCCCCGAAGCCTCCTCCTGCTGCTCTCAGGGGCCCTGGC 74
Query 45 CCTGACCGATACTTGGGCAGGCTCCCACTCCTTGAGGTATTTCAGCACCGCTGTGTCGCGGCCCGGCCGCGGGG 118
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCTGACCGATACTTGGGCGGGCTCCCACTCCTTGAGGTATTTCAGCACCGCTGTGTCGCGGCCCGGCCGCGGGG 148
Query 119 AGCCCCGCTACATCGCCGTGGAGTACGTAGACGACACGCAATTCCTGCGGTTCGACAGCGACGCCGCGATTCCG 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGCCCCGCTACATCGCCGTGGAGTACGTAGACGACACGCAATTCCTGCGGTTCGACAGCGACGCCGCGATTCCG 222
Query 193 AGGATGGAGCCGCGGGAGCCGTGGGTGGAGCAAGAGGGGCCGCAGTATTGGGAGTGGACCACAGGGTACGCCAA 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGGATGGAGCCGCGGGAGCCGTGGGTGGAGCAAGAGGGGCCGCAGTATTGGGAGTGGACCACAGGGTACGCCAA 296
Query 267 GGCCAACGCACAGACTGACCGAGTGGCCCTGAGGAACCTGCTCCGCCGCTACAACCAGAGCGAGGCTGGGTCTC 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGCCAACGCACAGACTGACCGAGTGGCCCTGAGGAACCTGCTCCGCCGCTACAACCAGAGCGAGGCTGGGTCTC 370
Query 341 ACACCCTCCAGGGAATGAATGGCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCG 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACACCCTCCAGGGAATGAATGGCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCG 444
Query 415 TACGACGGCAAGGATTACATCTCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTGGCTCAGAT 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TACGACGGCAAGGATTACATCTCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTGGCTCAGAT 518
Query 489 CACCCAGCGCTTCTATGAGGCAGAGGAATATGCAGAGGAGTTCAGGACCTACCTGGAGGGCGAGTGCCTGGAGT 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACCCAGCGCTTCTATGAGGCAGAGGAATATGCAGAGGAGTTCAGGACCTACCTGGAGGGCGAGTGCCTGGAGT 592
Query 563 TGCTCCGCAGATACTTGGAGAATGGGAAGGAGACGCTACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCCAC 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TGCTCCGCAGATACTTGGAGAATGGGAAGGAGACGCTACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCCAC 666
Query 637 CACCCCATCTCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACGCTGAC 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CACCCCATCTCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACGCTGAC 740
Query 711 CTGGCAGCGGGATGGGGAGGAACAGACCCAGGACACAGAGCTTGTGGAGACCAGGCCTGCAGGGGATGGAACCT 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTGGCAGCGGGATGGGGAGGAACAGACCCAGGACACAGAGCTTGTGGAGACCAGGCCTGCAGGGGATGGAACCT 814
Query 785 TCCAGAAGTGGGCCGCTGTGGTGGTGCCTTCTGGAGAGGAACAGAGATACACATGCCATGTGCAGCACGAGGGG 858
|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCCAGAAGTGGGCCGCTGTGGTGGTGCCTCCTGGAGAGGAACAGAGATACACATGCCATGTGCAGCACGAGGGG 888
Query 859 CTGCCCCAGCCCCTCATCCTGAGATGGGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGG 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTGCCCCAGCCCCTCATCCTGAGATGGGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGG 962
Query 933 CCTTGTTGTCCTTGGAGCTGTGGTCACTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAGAGCTCAGATA 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCTTGTTGTCCTTGGAGCTGTGGTCACTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAGAGCTCAGATA 1036
Query 1007 GAAACAGAGGGAGCTACTCTCAGGCTGCAGCCTACTCAGTGGTCAGCGGACTCTTGATGATAACATGGTGGTCA 1080
||||||||||||||||||||||||||||||||||||||||||||||||||..||||||||||||||||||||||
Sbjct 1037 GAAACAGAGGGAGCTACTCTCAGGCTGCAGCCTACTCAGTGGTCAGCGGAAACTTGATGATAACATGGTGGTCA 1110
Query 1081 AGCTTATTTCTCCTGGGGGTGCTCTTCCAAGGATATTTGGGCTGCCTCCGGAGTCACAGTGTCTTGGGCCGCCG 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGCTTATTTCTCCTGGGGGTGCTCTTCCAAGGATATTTGGGCTGCCTCCGGAGTCACAGTGTCTTGGGCCGCCG 1184
Query 1155 GAAGG---------------TGG------------------------------GTGACATGTGGATCT--TGTT 1181
||||| ||| |.||||..||||||| .|
Sbjct 1185 GAAGGAAAGTTGACTCATACTGGTGTCCAGTGAAGAAACCCAGGCGCATAAGAGGGACAGTTGGATCTCAGG-- 1256
Query 1182 TTTTTTGTGG-CTGTGGACATCTT-TCA---------ACACTGCCTTCTTGGCCTTGCAAAGCCTTCGCTTTGG 1244
|.|| |||| |.|||| ||| ||..|| |||||||.|...|.||||
Sbjct 1257 ------GAGGACTGT---CTTCTTCTCACCTCCCCGGACGATG-CTTCTTGACACAGGAAAG------------ 1308
Query 1245 CTTCGGCTTTAGGAGGGGC----AGGAGCTTCCT-TCTTCGT------TCTTGGCA------------------ 1289
||||.|.|| |||..|.||.| ||.|.|| |.|||.||
Sbjct 1309 ----------AGGATGTGCTGCTAGGGTCATCATGTCCTGGTTTATTGTGTTGTCAGTAGAATGAAATCAAAAT 1372
Query 1290 CCAT-CTT--------ATGAAAAGGGTCCAGATTAAG-----ATTT----TTGAC------------------- 1326
.||| ||| || ||||....|||.|.|||| |||| ||.||
Sbjct 1373 ACATACTTCATAAATAAT-AAAATAACCCATAATAAGTAAACATTTACAATTTACTCACACCATTGAGGTTTCC 1445
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 1446 TCCAGGTGTGAGCACAGCTGCAGACACACCTTGTCGCTTCAGTCAGGACACAGGACAGAGTAAAATGGGAAGAA 1519
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 1520 ACCACAGTCACTGCAGAAAGGGCCCCCATGGAAGAGGCCTGGCAGGGAGGCCAGCTGCCCCAGGGCCACCATAT 1593
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 1594 TTAGAGATGACTTCCCCTTTCTAGGCAGGACTGGGATTTTAAAATTCTTTTTGTATTCATAGTTGTTCTGAAAT 1667
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 1668 TGCAGGATGATGAGACCCAGCACTGGTGAGTTATACTGTCTCTTTCTTCCCTATTAAATTCTGTGCCAAACAGC 1741
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 1742 ACCTTCATATATTTATCTCCTCTTCCTGGAGAGAATAAAAACAATGGAAAAATTGAACCATACAAACATACTTT 1815
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 1816 AAATATGTGCTGTCAGAAGTAGCTACTAAAGGATTAATTCCACCAAAGTGAGGGAAGGTTTGAAAAGAAAAACA 1889
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 1890 TTGTATACCCATATTCAAAGCAGCATTATTCACGATAGCCAAGACAACACACACCAACACATGAATGAAGAAAA 1963
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 1964 TGTGGTATATATCGACAACGGAATATCATTCAGCCTTAAGAAGGAAACCTGGTCACAGGCTGCAACAGGGATAA 2037
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 2038 ACCTGAAGGACACTGCTAAGTAAAATAAGCCAATCACAAAGAAAACCCAATACTGCACATTTCCATTTATATGA 2111
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 2112 GGTGTCTAAACTGAAAGTAGACTAATGGCTGCTAGGGGCTCGGTGAGGGGGATGGATGAATGTTTGTTCAATGG 2185
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 2186 GCATAGAGTTTCAGTGTTGCAAGATGAAAAGTTCTAGAGATCTGTTGCACAACTATGTATTTACAGTTAATACT 2259
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 2260 GTACTACTGTATACTTTAAAATAGTTAAGATACCAAATTTTACATAATGTAGTTTTTGGCCCAAGGAAAAGACT 2333
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 2334 AATTAGCCCTGTTACTAATTTAGGGAAAAAGTACATGAATTCATTAAAAATATATTAGTATGCGCTTACCTTAG 2407
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 2408 ATACAGAAAACTATGAGACAAAAAGAGAGATCCCTGCTACCCCAGCTATCACCCATGAACCAGGAAAATCAGCA 2481
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 2482 CCTCCTGAAACTAGACAGAAAGGCTCACAGGCCCAGCCTTGACATGTTGAATCAGTCTGCATTTTGGCTGGAAC 2555
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 2556 CCAGGTGGCTCCACTGCATGTAAAGCACCTTCCCAGATAGTGATGGAGGGAGATCCTAGGACAGTGACTCTGCT 2629
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 2630 CCACGGGGAGAAGCCTCCAGTCCAGATGGGAGCAGCCAGAAGGGCCCAGGAGGGACATTTCCAAGAAGATAAAA 2703
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 2704 TTAACAGAATGTCCAAAGTGTCCAACGTCTTGAAAGAATCATACAAACAAAAGAGATATCAAACTTAAATTAAT 2777
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 2778 GAGAGTTAATAAAATAAACAAAAACAAATGCAAGTATTAACTCCAAGAAGAACCAATGTTGTACAGGCAGTGAA 2851
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 2852 AAGTAGTCCAGTTGACATATGAGAGGATTAGTCATGGTAAAAGAAACAAGAGATGGCTGAACTAAACATAATCA 2925
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 2926 CTATATAAATATACTGGGAAGAGTGAAAGAGAACAAGTACTCTTAACTGTTGCATCCACCATTGCGCTGTGCAA 2999
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 3000 CAATGGGTGCATCTGAAAAAAATCAAGCAATAATAATAAAGAAATGGTAGTTAGAGATACAGAAGTAAAGTCAA 3073
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 3074 AAGAATCAGCTAAAAAACTTGAAAGTGGTTGGCCCCTAGAAAGGCAGAAATTGAGAAGAGGCAGAGAGGACTCT 3147
Query 1327 -------------------------------------------------------------------------- 1326
Sbjct 3148 CATTTTTCTCAAGAGATTCTGCACAAATATTTGACTCTTTCAATTGTGCACAATTATAAATTTGATTAAAATAA 3221
Query 1327 -------------- 1326
Sbjct 3222 AAACAAAAGCTTCA 3235
