Nucleotide Global Alignment

Description

Query:
TRCN0000468080
Subject:
XM_017018220.1
Aligned Length:
1614
Identities:
849
Gaps:
691

Alignment

Query    1  ATGAGTCTGCTAAACTGTGAAAACAGCTGTGGATTCAGCCAGTCTGAAAGTGACTGCTGTGTGGCCATGGCCAG  74
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAGTCTGCTAAACTGTGAAAACAGCTGTGGATCCAGCCAGTCTGAAAGTGACTGCTGTGTGGCCATGGCCAG  74

Query   75  CTCCTGTAGCGCTGTAACAAAAGATGATAGTGTGGGTGGAACTGCCAGCACGGGGAACCTCTCCAGCTCATTTA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTCCTGTAGCGCTGTAACAAAAGATGATAGTGTGGGTGGAACTGCCAGCACGGGGAACCTCTCCAGCTCATTTA  148

Query  149  TGGAGGAGATCCAGGGATATGATGTAGAGTTTGACCCACCCCTGGAAAGCAAGTATGAATGCCCCATCTGCTTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGAGGAGATCCAGGGATATGATGTAGAGTTTGACCCACCCCTGGAAAGCAAGTATGAATGCCCCATCTGCTTG  222

Query  223  ATGGCATTACGAGAAGCAGTGCAAACGCCATGCGGCCATAGGTTCTGCAAAGCCTGCATCATAAAATCAATAAG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATGGCATTACGAGAAGCAGTGCAAACGCCATGCGGCCATAGGTTCTGCAAAGCCTGCATCATAAAATCAATAAG  296

Query  297  GGATGCAGGTCACAAATGTCCAGTTGACAATGAAATACTGCTGGAAAATCAACTATTTCCAGACAATTTTGCAA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGATGCAGGTCACAAATGTCCAGTTGACAATGAAATACTGCTGGAAAATCAACTATTTCCAGACAATTTTGCAA  370

Query  371  AACGTGAGATTCTTTCTCTGATGGTGAAATGTCCAAATGAAGGTTGTTTGCACAAGATGGAACTGAGACATCTT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AACGTGAGATTCTTTCTCTGATGGTGAAATGTCCAAATGAAGGTTGTTTGCACAAGATGGAACTGAGACATCTT  444

Query  445  GAGGATCATCAAGCACATTGTGAGTTTGCTCTTATGGATTGTCCCCAATGCCAGCGTCCCTTCCAAAAATTCCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAGGATCATCAAGCACATTGTGAGTTTGCTCTTATGGATTGTCCCCAATGCCAGCGTCCCTTCCAAAAATTCCA  518

Query  519  TATTAATATTCACATTCTGAAGGATTGTCCAAGGAGACAGGTTTCTTGTGACAACTGTGCTGCATCAATGGCAT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TATTAATATTCACATTCTGAAGGATTGTCCAAGGAGACAGGTTTCTTGTGACAACTGTGCTGCATCAATGGCAT  592

Query  593  TTGAAGATAAAGAGA--TCCA-------TGACCAGAACT---GTCCTTTGGCA-AATGTCATCTGTGAATACTG  653
            |||||||||||||||  |.||       ||.|||| .||   ||.|..||||| .||.|||.||          
Sbjct  593  TTGAAGATAAAGAGAGTTTCACTCTTGTTGCCCAG-GCTGGAGTGCAATGGCATGATCTCAGCT----------  655

Query  654  CAATACTATACTCATCAGAGAACAGATGCCT---------AATC-ATTATGATCTAGACTGCCCTACAGCCCCA  717
            ||..|| |..||||             ||||         ||.| |||.|       .|||||  .|||||   
Sbjct  656  CACCAC-AACCTCA-------------GCCTCCTGGGTTCAAGCGATTCT-------CCTGCC--TCAGCC---  703

Query  718  ATTCCATGCACATTCAGTA-CTTTTGGTTGCCATGAAAAGATGCAGAGGAATCACTTGGCAC--GCCACCTACA  788
              |||        |.|||| ||                         ||.||.|| .|||||  |||||     
Sbjct  704  --TCC--------TGAGTAGCT-------------------------GGGATTAC-AGGCACGTGCCAC-----  736

Query  789  AGAGAACACCCAGTCACACATGAGAATGTTGGCCCAGGC-----TGTTCATAGTTTGAGCGTTATACCCGACTC  857
                              ||||           ||.|||     |.||..||.|||.||   ||.|   |||  
Sbjct  737  ------------------CATG-----------CCCGGCTAATATTTTTGTATTTTTAG---TAGA---GAC--  773

Query  858  TGGGTATATCTCAGAGGTCCGGAATTTCCAGGAAACTATTCACCA-GTTAG--AGGGTCGCCTTGTAAGACAAG  928
                         |||||                    |||.||| |||.|  |||.|.|.||.| ||..|..|
Sbjct  774  -------------GAGGT--------------------TTCTCCATGTTGGTCAGGCTGGTCTCG-AACTCCCG  813

Query  929  ACCATCA---AATCCGGGAGC---TGACTGCTAAAATGGAAACTCAGAGTATGTATGTAAGTGAGCTCAAACGA  996
            ||| |||   ||||||...||   .|.||.|.|||.||    ||..||.||       .||   ||    ||||
Sbjct  814  ACC-TCAGGTAATCCGCCCGCCTTGGCCTCCCAAAGTG----CTGGGATTA-------CAG---GC----ACGA  868

Query  997  ACCATTCGAACCCTTG--AGGACAAAGTTGCTGAAATCGAAGCACAGCAGTGCAATGGAATTTATATTTGGAAG  1068
            .||||       |.||  |||.||||                                |.|||||.|||..||.
Sbjct  869  GCCAT-------CATGCCAGGCCAAA--------------------------------AGTTTATCTTTTAAAA  903

Query 1069  ATTGGCAACTTTGGAATGCATTTGAAATG--TCAAGA--AGAGGAGAAACCTGTTGTGATTCATAGCCCTGGAT  1138
            |   |.|||||.|.|.|||.|   ||..|  |||.||  |.||||     |.|||.|.||            ||
Sbjct  904  A---GAAACTTGGTAGTGCCT---AACAGCATCATGATTATAGGA-----CAGTTTTTAT------------AT  954

Query 1139  TCTACACTGGCAAACCCGGGTACAAACTG---TGCATGCGCTTGCACCTTCAGTTACCGACTGCTCAGCGCTGT  1209
            ||                   |.||||||   |..||                                     
Sbjct  955  TC-------------------AGAAACTGAGATAGAT-------------------------------------  972

Query 1210  GCAAACTATATATCCCTTTTTGTCCACACAATGCAAGGAGAATATGACAGCCACCTCCCTTGGCCCTTCCAGGG  1283
                                                                                      
Sbjct  973  --------------------------------------------------------------------------  972

Query 1284  TACAATACGCCTTACAATTCTTGATCAGTCTGAAGCACCTGTAAGGCAAAACCACGAAGAGATAATGGATGCCA  1357
                                                                                      
Sbjct  973  --------------------------------------------------------------------------  972

Query 1358  AACCAGAGCTGCTTGCTTTCCAGCGACCCACAATCCCACGGAACCCAAAAGGTTTTGGCTATGTAACTTTTATG  1431
                                                                                      
Sbjct  973  --------------------------------------------------------------------------  972

Query 1432  CATCTGGAAGCCCTAAGACAAAGAACTTTCATTAAGGATGACACATTATTAGTGCGCTGTGAGGTCTCCACCCG  1505
                                                                                      
Sbjct  973  --------------------------------------------------------------------------  972

Query 1506  CTTTGACATGGGTAGCCTTCGGAGGGAGGGTTTTCAGCCACGAAGTACTGATGCAGGGTA  1565
                                                                        
Sbjct  973  ------------------------------------------------------------  972