Nucleotide Global Alignment
Description
- Query:
- TRCN0000468084
- Subject:
- NM_001252006.1
- Aligned Length:
- 1911
- Identities:
- 736
- Gaps:
- 1056
Alignment
Query 1 ATGATGCCGTTTCCGGTGACAACCCAGGGACCACCGCAGCCGGCGCCGCCGCCGAATCGCTACGGCGTCTCCTC 74
|||||||||||.||.|||||.||||||.|||..||..|....|||||.|.|||.|.|||.|||.|..|.||
Sbjct 1 ---ATGCCGTTTCCAGTTACAACACAGGGATCACAACAAACACAACCGCCACAGAAGCACTATGGCATTACTTC 71
Query 75 GCCTATCAGTCTAGCGGTCCCCAAGGAGACGGACTGCCTCCTCACCCAGAGGCTAATAGAAACCCTCAGGCCCT 148
.||||||||..||||.|.||||||||||||.||||||.|.||.||.||||..|||||.||.||..|.|..||||
Sbjct 72 TCCTATCAGCTTAGCAGCCCCCAAGGAGACTGACTGCGTACTTACACAGAAACTAATTGAGACATTGAAACCCT 145
Query 149 TCGGGGTCTTCGAAGAGGAAGAGGAACTGCAGCGCAGGATTTTAGTTTTGGACAAATTAAATAATCTGGTAAAG 222
|.|||||.||.|||||||||||||||||||||||||||||||||.||||||..|||.|||||||.||||||||.
Sbjct 146 TTGGGGTTTTTGAAGAGGAAGAGGAACTGCAGCGCAGGATTTTAATTTTGGGAAAACTAAATAACCTGGTAAAA 219
Query 223 GAATGGATACGCGAAATCAGTGAAAGCAAGAGTCTTCCCCAGTCTGTAATTGAAAACGTTGGAGGAAAGATTTT 296
||.||||||||.|||||||||||||||||||.||||||.||.||||||||||||||.|||||||||||.|||||
Sbjct 220 GAGTGGATACGAGAAATCAGTGAAAGCAAGAATCTTCCACAATCTGTAATTGAAAATGTTGGAGGAAAAATTTT 293
Query 297 TACGTTTGGCTCTTACAGATTAGGAGTACATACGAAAGGCGCAGATATTGACGCCTTGTGCGTTGCACCAAGTC 370
|||.|||||.|||||||||||||||||.|||||.|||||.||.||||||||.||.|||||.|||||||||||.|
Sbjct 294 TACATTTGGATCTTACAGATTAGGAGTGCATACAAAAGGTGCTGATATTGATGCGTTGTGTGTTGCACCAAGAC 367
Query 371 ATGTGGATCGAAGCGACTTTTTCACCTCATTCTATGCTAAACTGAAACTACAGGAGGAAGTGAAAGATTTAAGG 444
||||.||||||||.||||||||||||||||||||||.|||..|||||.|||||||.|||||.|||||||||||.
Sbjct 368 ATGTTGATCGAAGTGACTTTTTCACCTCATTCTATGATAAGTTGAAATTACAGGAAGAAGTAAAAGATTTAAGA 441
Query 445 GCTGTCCAGGAGGCATTTGTGCCAGTTATCAAACTGTGTTTTGATGGGATAGAGATTGATATTTTATTTGCAAG 518
|||||..|.||||||||.||.||||||||.|||||.|||||||||||||||||||||||||||||.||||||||
Sbjct 442 GCTGTTGAAGAGGCATTCGTACCAGTTATTAAACTCTGTTTTGATGGGATAGAGATTGATATTTTGTTTGCAAG 515
Query 519 ATTAGCACTACAGACTATTCCAGAAGATTTGGACTTAAGAGATGACAGTCTACTTAAAAATTTAGACATTAGAT 592
|||||||||.|||||.|||||.|||||||||||..||.|||||||||||||.||.|||||||||||.||.||||
Sbjct 516 ATTAGCACTGCAGACAATTCCTGAAGATTTGGATCTACGAGATGACAGTCTGCTAAAAAATTTAGATATAAGAT 589
Query 593 GCATAAGAATCCTTAATGGTTGCCGGGTAACCGATGAAATTTTACATCTAGTGCCAAACATTGACAACTTCAGG 666
|.|||||||..|||||.||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 590 GTATAAGAAGTCTTAACGGTTGCAGGGTAACCGATGAAATTTTACATCTAGTACCAAACATTGACAACTTCAGG 663
Query 667 CTGACTCTGAGAGCCATCAAACTGTGGGCCAAGTGCCACAATATCTATTCCAATATATTAGGTTTCCTCGGAGG 740
.|.|||||||||||.||||||||.||||||||..|||||||.|||||||||||||||||||||||||||||.||
Sbjct 664 TTAACTCTGAGAGCTATCAAACTATGGGCCAAACGCCACAACATCTATTCCAATATATTAGGTTTCCTCGGTGG 737
Query 741 TGTTTCCTGGGCCATGCTAGTAGCAAGAACTTGTCAGCTTTATCCAAATGCAGTAGCGTCAACTCTTGTACGGA 814
||||||||||||.||||||||||||||||||||.||||||||||||||||||.||||.|||||||||||||..|
Sbjct 738 TGTTTCCTGGGCTATGCTAGTAGCAAGAACTTGCCAGCTTTATCCAAATGCAATAGCATCAACTCTTGTACATA 811
Query 815 AATTCTTCTTGGTATTTTCAGAATGGGAATGGCCAAACCCAGTGTTACTGAAGGAGCCTGAAGAACGGAATCTT 888
||||.||||||||||||||..|||||.| .||||| .||| ||
Sbjct 812 AATTTTTCTTGGTATTTTCTAAATGGTA------------TGTGTT--------------TAGA--------TT 851
Query 889 AATTTGCCTGTATGGGACCCAAGAGTAAATCCCAGTGATAGGTACCATCTTATGCCTATCATCACACCAGCATA 962
| |||
Sbjct 852 A---------TAT------------------------------------------------------------- 855
Query 963 CCCACAGCAGAACTCCACATACAACGTGTCTATTTCAACCAGGATGGTCATGATTGAGGAGTTTAAACAGGGGC 1036
Sbjct 856 -------------------------------------------------------------------------- 855
Query 1037 TTGCTATCACACACGAGATTTTGCTAAGTAAGGCAGAGTGGTCCAAACTCTTTGAAGCTCCAAGCTTCTTTCAA 1110
Sbjct 856 -------------------------------------------------------------------------- 855
Query 1111 AAGTACAAGCATTATATTGTACTTCTGGCAAGTGCATCAACAGAAAAACAACATTTAGAATGGGTGGGCTTGGT 1184
Sbjct 856 -------------------------------------------------------------------------- 855
Query 1185 GGAATCAAAGATCCGAATCCTGGTTGGGAGCTTGGAGAAGAATGAATTTATTACACTGGCACATGTGAATCCAC 1258
Sbjct 856 -------------------------------------------------------------------------- 855
Query 1259 AGTCATTTCCAGCACCCAAAGAAAATCCTGATATGGAAGAATTTCGTACAATGTGGGTGATTGGGTTAGGGCTA 1332
Sbjct 856 -------------------------------------------------------------------------- 855
Query 1333 AAAAAGCCAGATAATTCTGAAATTCTCAGCATTGATCTCACCTATGATATCCAGTCTTTCACAGATACTGTTTA 1406
Sbjct 856 -------------------------------------------------------------------------- 855
Query 1407 TAGGCAAGCAGTGAATAGTAAGATGTTTGAGATGGGTATGAAAATTACTGCAGTGCATTTAAGAAGAAAGGAAC 1480
Sbjct 856 -------------------------------------------------------------------------- 855
Query 1481 TTCACCAGCTGCTGCCTCATCATGTGCTTCAGGACAAGAAAGCACACTCAACAGAAGGTAGAAGATTGACAGAT 1554
Sbjct 856 -------------------------------------------------------------------------- 855
Query 1555 TTGAACGACAGCAGCTTTGACTTGTCTGCAGGCTGTGAAAACAGCATGTCTGTGCCTTCATCTACTAGCACTAT 1628
Sbjct 856 -------------------------------------------------------------------------- 855
Query 1629 GAAGACAGGCCCATTGATTAGCAGTTCTCAGGGTAGAAACAGTCCTGCCTTGGCTGTAATGACAGCATCTGTGG 1702
Sbjct 856 -------------------------------------------------------------------------- 855
Query 1703 CTAACATACAGGCTACTGAATTTTCCTTGCAACAGGTGAATACCAATGAAAGTTCAGGGGTTGCATTAAACGAA 1776
Sbjct 856 -------------------------------------------------------------------------- 855
Query 1777 AGTATTCCTCACGCTGTCTCTCAGCCTGCCATTTCTCCATCACCAAAGGCCATGGTCGCCAGAGTTGTTTCTTC 1850
Sbjct 856 -------------------------------------------------------------------------- 855
Query 1851 AACATGTCTCATAAGCCATCCAGACCTTCAGGAAACTCAGCAACAAACATATCTAATCCTA 1911
Sbjct 856 ------------------------------------------------------------- 855
