Nucleotide Global Alignment
Description
- Query:
- TRCN0000468084
- Subject:
- NM_001293628.1
- Aligned Length:
- 2238
- Identities:
- 997
- Gaps:
- 1080
Alignment
Query 1 ATGATGCCGTTTCCGGTGACAACCCAGGGACCACCGCAGCCGGCGCCGCCGCCGAATCGCTACGGCGTCTCCTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCCTATCAGTCTAGCGGTCCCCAAGGAGACGGACTGCCTCCTCACCCAGAGGCTAATAGAAACCCTCAGGCCCT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCGGGGTCTTCGAAGAGGAAGAGGAACTGCAGCGCAGGATTTTAGTTTTGGACAAATTAAATAATCTGGTAAAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAATGGATACGCGAAATCAGTGAAAGCAAGAGTCTTCCCCAGTCTGTAATTGAAAACGTTGGAGGAAAGATTTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TACGTTTGGCTCTTACAGATTAGGAGTACATACGAAAGGCGCAGATATTGACGCCTTGTGCGTTGCACCAAGTC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ATGTGGATCGAAGCGACTTTTTCACCTCATTCTATGCTAAACTGAAACTACAGGAGGAAGTGAAAGATTTAAGG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GCTGTCCAGGAGGCATTTGTGCCAGTTATCAAACTGTGTTTTGATGGGATAGAGATTGATATTTTATTTGCAAG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ATTAGCACTACAGACTATTCCAGAAGATTTGGACTTAAGAGATGACAGTCTACTTAAAAATTTAGACATTAGAT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GCATAAGAATCCTTAATGGTTGCCGGGTAACCGATGAAATTTTACATCTAGTGCCAAACATTGACAACTTCAGG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CTGACTCTGAGAGCCATCAAACTGTGGGCCAAGTGCCACAATATCTATTCCAATATATTAGGTTTCCTCGGAGG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TGTTTCCTGGGCCATGCTAGTAGCAAGAACTTGTCAGCTTTATCCAAATGCAGTAGCGTCAACTCTTGTACGGA 814
||||||||||||||||||||.||||||||||||||||||.||||.|||||||||||||..|
Sbjct 1 -------------ATGCTAGTAGCAAGAACTTGCCAGCTTTATCCAAATGCAATAGCATCAACTCTTGTACATA 61
Query 815 AATTCTTCTTGGTATTTTCAGAATGGGAATGGCCAAACCCAGTGTTACTGAAGGAGCCTGAAGAACGGAATCTT 888
||||.||||||||||||||..||||||||||||||||.||||||.||.||||..|||||||||||.|.||||||
Sbjct 62 AATTTTTCTTGGTATTTTCTAAATGGGAATGGCCAAATCCAGTGCTATTGAAACAGCCTGAAGAATGCAATCTT 135
Query 889 AATTTGCCTGTATGGGACCCAAGAGTAAATCCCAGTGATAGGTACCATCTTATGCCTATCATCACACCAGCATA 962
|||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||.||.|||||||||||
Sbjct 136 AATTTGCCTGTATGGGACCCAAGGGTAAACCCCAGTGATAGGTACCATCTTATGCCTATAATTACACCAGCATA 209
Query 963 CCCACAGCAGAACTCCACATACAACGTGTCTATTTCAACCAGGATGGTCATGATTGAGGAGTTTAAACAGGGGC 1036
||||||.|||||||||||.|||||.|||||..|||||||..|||||||||||.||||||||||||||||.||.|
Sbjct 210 CCCACAACAGAACTCCACGTACAATGTGTCCGTTTCAACACGGATGGTCATGGTTGAGGAGTTTAAACAAGGTC 283
Query 1037 TTGCTATCACACACGAGATTTTGCTAAGTAAGGCAGAGTGGTCCAAACTCTTTGAAGCTCCAAGCTTCTTTCAA 1110
|||||||||||.|.||.||||||||.|||||||||||||||||||||||.|||||||||||||.||||||||||
Sbjct 284 TTGCTATCACAGATGAAATTTTGCTGAGTAAGGCAGAGTGGTCCAAACTTTTTGAAGCTCCAAACTTCTTTCAA 357
Query 1111 AAGTACAAGCATTATATTGTACTTCTGGCAAGTGCATCAACAGAAAAACAACATTTAGAATGGGTGGGCTTGGT 1184
||||||||||||||||||||||||||.|||||||||.|||||||||||||||...|.|||||||||||||||||
Sbjct 358 AAGTACAAGCATTATATTGTACTTCTAGCAAGTGCACCAACAGAAAAACAACGCCTGGAATGGGTGGGCTTGGT 431
Query 1185 GGAATCAAAGATCCGAATCCTGGTTGGGAGCTTGGAGAAGAATGAATTTATTACACTGGCACATGTGAATCCAC 1258
|||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||.|
Sbjct 432 GGAATCAAAAATCCGAATCCTGGTTGGAAGCTTGGAGAAGAATGAATTTATTACACTGGCTCATGTGAATCCCC 505
Query 1259 AGTCATTTCCAGCACCCAAAGAAAATCCTGATATGGAAGAATTTCGTACAATGTGGGTGATTGGGTTAGGGCTA 1332
||||||||||||||||||||||||||||.||.|.||||||||||||.||.|||||||||||||||||||.|.|.
Sbjct 506 AGTCATTTCCAGCACCCAAAGAAAATCCCGACAAGGAAGAATTTCGCACGATGTGGGTGATTGGGTTAGTGTTT 579
Query 1333 AAAAAGCCAGATAATTCTGAAATTCTCAGCATTGATCTCACCTATGATATCCAGTCTTTCACAGATACTGTTTA 1406
|||||..||||.||.|||||||..|||||..|||||||||||||||||||.|||||||||||||||||.|||||
Sbjct 580 AAAAAAACAGAAAACTCTGAAAACCTCAGTGTTGATCTCACCTATGATATTCAGTCTTTCACAGATACAGTTTA 653
Query 1407 TAGGCAAGCAGTGAATAGTAAGATGTTTGAGATGGGTATGAAAATTACTGCAGTGCATTTAAGAAGAAAGGAAC 1480
||||||||||.|.||.||.||||||||||||.|||.||||||||||.|||||.|||||.|||.|||||||.|||
Sbjct 654 TAGGCAAGCAATAAACAGCAAGATGTTTGAGGTGGATATGAAAATTGCTGCAATGCATGTAAAAAGAAAGCAAC 727
Query 1481 TTCACCAGCTGCTGCCTCATCATGTGCTTCAGGACAAGAAAGCACACTCAACAGAAGGTAGAAGATTGACAGAT 1554
|.||.||.||.||.|||.||||||||||||||.|.||||||...||.||||||||||||...|.||||||||.|
Sbjct 728 TCCATCAACTACTACCTAATCATGTGCTTCAGAAAAAGAAAAAGCATTCAACAGAAGGTGTCAAATTGACAGCT 801
Query 1555 TTGAACGACAGCAGCTTTGACTTGTCTGCAGGCTGTGAAAACAGCATGTCTGTGCCTTCATCTACTAGCACTAT 1628
.|.||.|||||||||.|.|||||||||...|.|.||||.|||||||||||||||||||||.|||||||..|||.
Sbjct 802 CTCAATGACAGCAGCCTCGACTTGTCTATGGACAGTGATAACAGCATGTCTGTGCCTTCACCTACTAGTGCTAC 875
Query 1629 GAAGACAGGCCCATTGA------TTAGCAGTTCTCAGGGTAGAAACAGTCCTGCCTTGGCTGTAATGACAGCAT 1696
||||||..|.||||||| .|.||||.||||||||.||||||||||||||....|||||||...||||||
Sbjct 876 GAAGACCAGTCCATTGAACAGTTCTGGCAGCTCTCAGGGCAGAAACAGTCCTGCTCCAGCTGTAACAGCAGCAT 949
Query 1697 CTGTGGCTAACATACAGGCTACTGAATTTTCCTTGCAACAGGTGAATACCAATGAAAGTTCAGGGGTTGCATTA 1770
|||||.|.||||||||||||||||||.||||..|||.|||.||.|||.|||.||||||.|||||||.|.|||..
Sbjct 950 CTGTGACCAACATACAGGCTACTGAAGTTTCTGTGCCACAAGTAAATTCCAGTGAAAGCTCAGGGGGTACATCG 1023
Query 1771 AACGAAAGTATTCCTCACGCTGTCTCTCAGCCTGCCATTTCTCCATCACCAAAGGCCATGGTCGCCAGAGTTGT 1844
|..|||||.||||||||..|||.|.|.||.||.||||||||||||.||||||||.|.|.||||.||||||||||
Sbjct 1024 AGTGAAAGCATTCCTCAAACTGCCACACAACCAGCCATTTCTCCACCACCAAAGCCTACGGTCTCCAGAGTTGT 1097
Query 1845 TTCTTCAACATGTCTCATAAGCC---------------------ATCCAG-ACCTTCAGGAAACTCAGCAACAA 1896
||||||||||.||||..|||.|| ||.||| |.||||||||||..|||||||||
Sbjct 1098 TTCTTCAACACGTCTGGTAAACCCACCACCTAGATCTTCAGGAAATGCAGCAACTTCAGGAAATGCAGCAACAA 1171
Query 1897 ACATATCTAATCCTA----------------------------------------------------------- 1911
|.|||.|||.|||||
Sbjct 1172 AAATACCTACTCCTATAGTAGGAGTCAAGAGGACATCCTCACCTCATAAAGAAGAGAGTCCCAAGAAAACCAAA 1245
Query 1912 -------------------------------------------------------------------------- 1911
Sbjct 1246 ACAGAAGAGGATGAAACAAGTGAAGATGCTAACTGTCTTGCTTTGAGTGGACATGATAAAACAGAAGCAAAGGA 1319
Query 1912 -------------------------------------------------------------------------- 1911
Sbjct 1320 ACAACTTGATACAGAGACAAGTACAACTCAATCAGAAACTATTCAGACAGCGGCTTCTCTGTTGGCCTCTCAGA 1393
Query 1912 -------------------------------------------------------------------------- 1911
Sbjct 1394 AAACATCCAGTACAGACCTTTCTGATATCCCTGCTCTCCCTGCAAATCCTATTCCTGTTATCAAGAATTCAATA 1467
Query 1912 ------------------ 1911
Sbjct 1468 AAACTGAGATTGAATCGG 1485
