Nucleotide Global Alignment

Description

• Query: TRCN0000468180
• Subject: NM_001079901.1
• Aligned Length: 1864
• Identities: 1385
• Gaps: 233

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGGATAGGGATGTCTTTATTGCTACAGTTTTCTCTGTCATCCGGGGGCTACCGAAGTGTGGGCCGAAGCAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCGAAGTCTCCCCAGGAACATCCCCAGAAGGAGCTGGAAAAAGCCTCACCCCCAGCTCTTCAGTCTTCAGGCAG  148

Query    1  -----------ATGCTGGAACGTCGTTGCAGGGGCCCCCTGGCCATGGGCCTGGCCCAGCCCCGACTCCTTTCT  63
                       ||||||||||..||.||||||||||||..|||||||||||..||.||||||.|.|||.|||||
Sbjct  149  AGGAAGAACCGATGCTGGAACAGCGCTGCAGGGGCCCCACGGCCATGGGCCCAGCTCAGCCCTGGCTCTTTTCT  222

Query   64  GGGCCCTCCCAGGAGTCACCCCAGACCCTGGGGAAGGAGTCCCGCGGGCTGAGGCAACAAGGCACGTCAGTGGC  137
            |||||||||||||||||..|||||.||     ||       |.|.|||.|||||.|.||.||||..|||   ||
Sbjct  223  GGGCCCTCCCAGGAGTCCTCCCAGCCC-----GA-------CAGAGGGTTGAGGTACCAGGGCAAATCA---GC  281

Query  138  CCAGTCTGGTGCCCAAGCCCCAGGCAGGGCCCATCGCTGTGCCCACTGTCGAAGGCACTTCCCTGGCTGGGTGG  211
            .|||.|..|.|.||||.|||||||||.||.||||||.||||||||||||||.|.||.||||||.||||||||||
Sbjct  282  TCAGCCAAGAGGCCAAACCCCAGGCAAGGTCCATCGTTGTGCCCACTGTCGGAAGCGCTTCCCGGGCTGGGTGG  355

Query  212  CTCTGTGGCTTCACACCCGCCGGTGCCAGGCCCGGCTGCCCTTGCCCTGCTCTGAGTGTGGCCGTCGCTTTCGC  285
            |.|||||||||||..|.||.||||||||||||||||||||..||||||||..|||.||...||..|||||||||
Sbjct  356  CCCTGTGGCTTCATGCTCGGCGGTGCCAGGCCCGGCTGCCTCTGCCCTGCCATGAATGCAACCAGCGCTTTCGC  429

Query  286  CATGCCCCCTTCTTAGCACTGCACCGCCAGGTCCATGCTGCTGCCACCCCAGACCTGGGCTTTGCCTGCCACCT  359
            ||.||||||||||||||.|||||.|..|||||.||||||.||||...|||.||||||||.||...|||||||||
Sbjct  430  CACGCCCCCTTCTTAGCGCTGCATCTTCAGGTTCATGCTTCTGCAGTCCCCGACCTGGGTTTCATCTGCCACCT  503

Query  360  CTGTGGGCAGAGCTTCCGAGGCTGGGTGGCCCTGGTTCTGCATCTGCGGGCCCATTCAGCTGCAAAGCGGCCCA  433
            .||||||||.|||||||||||.|||||.|||||||||||||||||||||||.||.||||||.||||||||||||
Sbjct  504  ATGTGGGCATAGCTTCCGAGGATGGGTAGCCCTGGTTCTGCATCTGCGGGCTCACTCAGCTTCAAAGCGGCCCA  577

Query  434  TCGCTTGTCCCAAATGCGAGAGACGCTTCTGGCGACGAAAGCAGCTTCGAGCTCATCTGCGGCGGTGCCACCCT  507
            ||.||||.||..|||||||.||||||||||||||||.|||.||||||||||||||||||||..|||||||.||.
Sbjct  578  TCACTTGCCCTGAATGCGACAGACGCTTCTGGCGACAAAAACAGCTTCGAGCTCATCTGCGAAGGTGCCAGCCC  651

Query  508  CCCGCCCCGGAGGCCCGGCCCTTCATATGCGGCAACTGTGGCCGGAGCTTTGCCCAGTGGGACCAGCTAGTTGC  581
            ||.|.|||.|||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.||||.
Sbjct  652  CCTGTCCCTGAGGCCCGGCCCTTCATATGCGGCAACTGTGGCCGGAGCTTTGCCCAATGGGACCAACTGGTTGT  725

Query  582  CCACAAGCGGGTGCACGTAGCTGAGGCCCTGGAGGAGGCCGCAGCCAAGGCTCTGGGGCCCCGGCCCA-GGGGC  654
            .|||||||||||||||||.|||||||||.||||||||||.||||||||.||.|||||.||.| ||||| |.||.
Sbjct  726  TCACAAGCGGGTGCACGTGGCTGAGGCCTTGGAGGAGGCAGCAGCCAAAGCCCTGGGTCCTC-GCCCACGAGGA  798

Query  655  CGCCCCGCGGTGACCGCCCCCCGGCCCGGTGGAGATGCCGTCGACCGCCCCTTCCAGTGTGCCTGTTGTGGCAA  728
            ||.||||      |.||.|||.||||.||||||||.||.||.|||||||||||||||||||||||.||.|||||
Sbjct  799  CGTCCCG------CAGCTCCCAGGCCTGGTGGAGACGCTGTGGACCGCCCCTTCCAGTGTGCCTGCTGCGGCAA  866

Query  729  GCGCTTCCGGCACAAGCCCAACTTGATCGCTCACCGCCGCGTGCACACGGGCGAGCGGCCCCACCAGTGCCCCG  802
            |||.|||||.|||||||||||..|||||||.|||||||||||||||||.||.|||||.||.|||||||||||.|
Sbjct  867  GCGTTTCCGCCACAAGCCCAATCTGATCGCCCACCGCCGCGTGCACACTGGTGAGCGACCACACCAGTGCCCAG  940

Query  803  AGTGCGGGAAGCGCTTTACCAATAAGCCCTATCTGACTTCGCACCGGCGCATCCACACCGGCGAGAAGCCCTAC  876
            |||||||||||||.||.|||||.||||||||.|||||.||||||||||||||.||.||||||||||||||||||
Sbjct  941  AGTGCGGGAAGCGTTTCACCAACAAGCCCTACCTGACCTCGCACCGGCGCATACATACCGGCGAGAAGCCCTAC  1014

Query  877  CCGTGCAAAGAGTGCGGCCGCCGCTTCCGGCACAAACCCAACCTGCTGTCTCACAGCAAGATTCACAAGCGATC  950
            ||.||||..|||||.||||||||||||||.|||||||||||||||.||||.||||||||.||.||||||||.|.
Sbjct 1015  CCATGCACCGAGTGTGGCCGCCGCTTCCGCCACAAACCCAACCTGTTGTCGCACAGCAAAATCCACAAGCGCTT  1088

Query  951  CGAGGGGTCGGCCCAGGCCGCCCCCGGCCCGGGGAGCCCCCAGCTGCCAGCCGGCCCCCAGGAGTCCGCGGCCG  1024
            .||||..||.||.|||||.|||||...|||.|.|||.|.||||.|                     .||.||.|
Sbjct 1089  GGAGGTCTCAGCGCAGGCTGCCCCACACCCCGAGAGTCACCAGAT---------------------TGCAGCAG  1141

Query 1025  AGCCCACCCCGGCGGTACCTCTGAAACCGGCCCAGGAGCCGCCGCCAGGGG-CCCCGCCAGAGCACCCGCAGGA  1097
            ||||.|      .||.||      ||||.||.|..|.|..||| ||.|||| ||||||             |||
Sbjct 1142  AGCCTA------TGGCAC------AACCTGCACTTGGGGTGCC-CCTGGGGTCCCCGC-------------GGA  1189

Query 1098  CCCGATCGAAGCCCCC--CCCTCCCTCTACAGCTGCGACGACTGCGGCAGGAGCTTCCGGCTGGAGCGCTTCCT  1169
            |||.|.|..||.|.||  |.|| |||..|.||||||..||||||||||.|.|||||||||||||||||||||||
Sbjct 1190  CCCCAGCTGAGGCACCTGCGCT-CCTGCATAGCTGCTCCGACTGCGGCCGCAGCTTCCGGCTGGAGCGCTTCCT  1262

Query 1170  GCGGGCCCACCAGCGGCAGCACACCGGGGAGCGGCCCTTCACCTGCGCCGAGTGCGGGAAGAACTTCGGCAAGA  1243
            ||||...||||||.||||||||||.||||||.||||||||.|||||.|.|||||.||.||||||||||||||||
Sbjct 1263  GCGGCTACACCAGAGGCAGCACACAGGGGAGAGGCCCTTCGCCTGCACAGAGTGTGGCAAGAACTTCGGCAAGA  1336

Query 1244  AGACGCACCTGGTGGCGCACTCGCGCGTGCACTCCGGCGAGCGGCCCTTCGCCTGCGAGGAGTGCGGCCGCCGC  1317
            ||||||||||||||||||||||.|||||||||||||||||.||.||||||||||||||||||||.||.|||||.
Sbjct 1337  AGACGCACCTGGTGGCGCACTCACGCGTGCACTCCGGCGAACGTCCCTTCGCCTGCGAGGAGTGTGGTCGCCGT  1410

Query 1318  TTCTCCCAGGGCAGCCATCTGGCGGCGCATCGGCGCGACCACGCCCCCGATCGGCCCTTCGTGTGTCCCGACTG  1391
            |||||.|||||||||||.|||||.||.||.|||||.|||||.||.||.||..|||||||||||||.||.|||||
Sbjct 1411  TTCTCACAGGGCAGCCACCTGGCAGCCCACCGGCGAGACCATGCACCAGAGAGGCCCTTCGTGTGCCCGGACTG  1484

Query 1392  CGGCAAGGCCTTCCGCCACAAACCCTACCTGGCGGCGCACCGGCGCATCCACACCGGCGAGAAGCCCTACGTCT  1465
            |||||||||.|||||||||||.|||||||||||.||||||||.|||||||||||.||||||||.|||||.||.|
Sbjct 1485  CGGCAAGGCTTTCCGCCACAAGCCCTACCTGGCTGCGCACCGACGCATCCACACAGGCGAGAAACCCTATGTGT  1558

Query 1466  GCCCCGACTGCGGCAAAGCCTTCAGCCAGAAGTCCAACCTGGTGTCGCACCGGCGCATCCACACGGGCGAGCGG  1539
            |.||||||||.||||||||.|||||.||||||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct 1559  GTCCCGACTGTGGCAAAGCTTTCAGTCAGAAGTCCAACCTGGTGTCCCACCGGCGCATCCACACAGGCGAGCGG  1632

Query 1540  CCCTACGCCTGTCCCGACTGCGACCGCAGCTTCAGCCAGAAGTCCAACCTCATCACCCACCGCAAGAGCCACAT  1613
            |||||||||||.||||||||.||.||.||||||||.|||||||||||.||.|||||.|||||.|||||||||||
Sbjct 1633  CCCTACGCCTGCCCCGACTGTGATCGTAGCTTCAGTCAGAAGTCCAATCTTATCACACACCGGAAGAGCCACAT  1706

Query 1614  CCGGGACGGCGCCTTCTGCTGTGCCATCTGTGGCCAGACCTTCGACGACGAGGAGAGACTCCTGGCCCACCAGA  1687
            ||||||.|||||||||||.|||||||||||||||||||||||.||.||||||||..|||||.||...|||||||
Sbjct 1707  CCGGGATGGCGCCTTCTGTTGTGCCATCTGTGGCCAGACCTTTGATGACGAGGACCGACTCTTGATGCACCAGA  1780

Query 1688  AGAAGCACGATGTC  1701
            |||||||.||||.|
Sbjct 1781  AGAAGCATGATGCC  1794