Nucleotide Global Alignment
Description
- Query:
- TRCN0000468180
- Subject:
- NM_001079904.1
- Aligned Length:
- 1870
- Identities:
- 1385
- Gaps:
- 239
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATGGGCGCTGCGTCCCTGGAGGGCACGCGGGAGAGTTTTCTCTGTCATCCGGGGGCTACCGAAGTGTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGAAGCAGCCGAAGTCTCCCCAGGAACATCCCCAGAAGGAGCTGGAAAAAGCCTCACCCCCAGCTCTTCAGTC 148
Query 1 -----------------ATGCTGGAACGTCGTTGCAGGGGCCCCCTGGCCATGGGCCTGGCCCAGCCCCGACTC 57
||||||||||..||.||||||||||||..|||||||||||..||.||||||.|.|||
Sbjct 149 TTCAGGAGGAAGAACCGATGCTGGAACAGCGCTGCAGGGGCCCCACGGCCATGGGCCCAGCTCAGCCCTGGCTC 222
Query 58 CTTTCTGGGCCCTCCCAGGAGTCACCCCAGACCCTGGGGAAGGAGTCCCGCGGGCTGAGGCAACAAGGCACGTC 131
.||||||||||||||||||||||..|||||.|| || |.|.|||.|||||.|.||.||||..||
Sbjct 223 TTTTCTGGGCCCTCCCAGGAGTCCTCCCAGCCC-----GA-------CAGAGGGTTGAGGTACCAGGGCAAATC 284
Query 132 AGTGGCCCAGTCTGGTGCCCAAGCCCCAGGCAGGGCCCATCGCTGTGCCCACTGTCGAAGGCACTTCCCTGGCT 205
| ||.|||.|..|.|.||||.|||||||||.||.||||||.||||||||||||||.|.||.||||||.||||
Sbjct 285 A---GCTCAGCCAAGAGGCCAAACCCCAGGCAAGGTCCATCGTTGTGCCCACTGTCGGAAGCGCTTCCCGGGCT 355
Query 206 GGGTGGCTCTGTGGCTTCACACCCGCCGGTGCCAGGCCCGGCTGCCCTTGCCCTGCTCTGAGTGTGGCCGTCGC 279
|||||||.|||||||||||..|.||.||||||||||||||||||||..||||||||..|||.||...||..|||
Sbjct 356 GGGTGGCCCTGTGGCTTCATGCTCGGCGGTGCCAGGCCCGGCTGCCTCTGCCCTGCCATGAATGCAACCAGCGC 429
Query 280 TTTCGCCATGCCCCCTTCTTAGCACTGCACCGCCAGGTCCATGCTGCTGCCACCCCAGACCTGGGCTTTGCCTG 353
||||||||.||||||||||||||.|||||.|..|||||.||||||.||||...|||.||||||||.||...|||
Sbjct 430 TTTCGCCACGCCCCCTTCTTAGCGCTGCATCTTCAGGTTCATGCTTCTGCAGTCCCCGACCTGGGTTTCATCTG 503
Query 354 CCACCTCTGTGGGCAGAGCTTCCGAGGCTGGGTGGCCCTGGTTCTGCATCTGCGGGCCCATTCAGCTGCAAAGC 427
||||||.||||||||.|||||||||||.|||||.|||||||||||||||||||||||.||.||||||.||||||
Sbjct 504 CCACCTATGTGGGCATAGCTTCCGAGGATGGGTAGCCCTGGTTCTGCATCTGCGGGCTCACTCAGCTTCAAAGC 577
Query 428 GGCCCATCGCTTGTCCCAAATGCGAGAGACGCTTCTGGCGACGAAAGCAGCTTCGAGCTCATCTGCGGCGGTGC 501
||||||||.||||.||..|||||||.||||||||||||||||.|||.||||||||||||||||||||..|||||
Sbjct 578 GGCCCATCACTTGCCCTGAATGCGACAGACGCTTCTGGCGACAAAAACAGCTTCGAGCTCATCTGCGAAGGTGC 651
Query 502 CACCCTCCCGCCCCGGAGGCCCGGCCCTTCATATGCGGCAACTGTGGCCGGAGCTTTGCCCAGTGGGACCAGCT 575
||.||.||.|.|||.|||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||
Sbjct 652 CAGCCCCCTGTCCCTGAGGCCCGGCCCTTCATATGCGGCAACTGTGGCCGGAGCTTTGCCCAATGGGACCAACT 725
Query 576 AGTTGCCCACAAGCGGGTGCACGTAGCTGAGGCCCTGGAGGAGGCCGCAGCCAAGGCTCTGGGGCCCCGGCCCA 649
.||||..|||||||||||||||||.|||||||||.||||||||||.||||||||.||.|||||.||.| |||||
Sbjct 726 GGTTGTTCACAAGCGGGTGCACGTGGCTGAGGCCTTGGAGGAGGCAGCAGCCAAAGCCCTGGGTCCTC-GCCCA 798
Query 650 -GGGGCCGCCCCGCGGTGACCGCCCCCCGGCCCGGTGGAGATGCCGTCGACCGCCCCTTCCAGTGTGCCTGTTG 722
|.||.||.|||| |.||.|||.||||.||||||||.||.||.|||||||||||||||||||||||.||
Sbjct 799 CGAGGACGTCCCG------CAGCTCCCAGGCCTGGTGGAGACGCTGTGGACCGCCCCTTCCAGTGTGCCTGCTG 866
Query 723 TGGCAAGCGCTTCCGGCACAAGCCCAACTTGATCGCTCACCGCCGCGTGCACACGGGCGAGCGGCCCCACCAGT 796
.||||||||.|||||.|||||||||||..|||||||.|||||||||||||||||.||.|||||.||.|||||||
Sbjct 867 CGGCAAGCGTTTCCGCCACAAGCCCAATCTGATCGCCCACCGCCGCGTGCACACTGGTGAGCGACCACACCAGT 940
Query 797 GCCCCGAGTGCGGGAAGCGCTTTACCAATAAGCCCTATCTGACTTCGCACCGGCGCATCCACACCGGCGAGAAG 870
||||.||||||||||||||.||.|||||.||||||||.|||||.||||||||||||||.||.||||||||||||
Sbjct 941 GCCCAGAGTGCGGGAAGCGTTTCACCAACAAGCCCTACCTGACCTCGCACCGGCGCATACATACCGGCGAGAAG 1014
Query 871 CCCTACCCGTGCAAAGAGTGCGGCCGCCGCTTCCGGCACAAACCCAACCTGCTGTCTCACAGCAAGATTCACAA 944
||||||||.||||..|||||.||||||||||||||.|||||||||||||||.||||.||||||||.||.|||||
Sbjct 1015 CCCTACCCATGCACCGAGTGTGGCCGCCGCTTCCGCCACAAACCCAACCTGTTGTCGCACAGCAAAATCCACAA 1088
Query 945 GCGATCCGAGGGGTCGGCCCAGGCCGCCCCCGGCCCGGGGAGCCCCCAGCTGCCAGCCGGCCCCCAGGAGTCCG 1018
|||.|..||||..||.||.|||||.|||||...|||.|.|||.|.||||.| .|
Sbjct 1089 GCGCTTGGAGGTCTCAGCGCAGGCTGCCCCACACCCCGAGAGTCACCAGAT---------------------TG 1141
Query 1019 CGGCCGAGCCCACCCCGGCGGTACCTCTGAAACCGGCCCAGGAGCCGCCGCCAGGGG-CCCCGCCAGAGCACCC 1091
|.||.|||||.| .||.|| ||||.||.|..|.|..||| ||.|||| ||||||
Sbjct 1142 CAGCAGAGCCTA------TGGCAC------AACCTGCACTTGGGGTGCC-CCTGGGGTCCCCGC---------- 1192
Query 1092 GCAGGACCCGATCGAAGCCCCC--CCCTCCCTCTACAGCTGCGACGACTGCGGCAGGAGCTTCCGGCTGGAGCG 1163
||||||.|.|..||.|.|| |.|| |||..|.||||||..||||||||||.|.|||||||||||||||||
Sbjct 1193 ---GGACCCCAGCTGAGGCACCTGCGCT-CCTGCATAGCTGCTCCGACTGCGGCCGCAGCTTCCGGCTGGAGCG 1262
Query 1164 CTTCCTGCGGGCCCACCAGCGGCAGCACACCGGGGAGCGGCCCTTCACCTGCGCCGAGTGCGGGAAGAACTTCG 1237
||||||||||...||||||.||||||||||.||||||.||||||||.|||||.|.|||||.||.||||||||||
Sbjct 1263 CTTCCTGCGGCTACACCAGAGGCAGCACACAGGGGAGAGGCCCTTCGCCTGCACAGAGTGTGGCAAGAACTTCG 1336
Query 1238 GCAAGAAGACGCACCTGGTGGCGCACTCGCGCGTGCACTCCGGCGAGCGGCCCTTCGCCTGCGAGGAGTGCGGC 1311
||||||||||||||||||||||||||||.|||||||||||||||||.||.||||||||||||||||||||.||.
Sbjct 1337 GCAAGAAGACGCACCTGGTGGCGCACTCACGCGTGCACTCCGGCGAACGTCCCTTCGCCTGCGAGGAGTGTGGT 1410
Query 1312 CGCCGCTTCTCCCAGGGCAGCCATCTGGCGGCGCATCGGCGCGACCACGCCCCCGATCGGCCCTTCGTGTGTCC 1385
|||||.|||||.|||||||||||.|||||.||.||.|||||.|||||.||.||.||..|||||||||||||.||
Sbjct 1411 CGCCGTTTCTCACAGGGCAGCCACCTGGCAGCCCACCGGCGAGACCATGCACCAGAGAGGCCCTTCGTGTGCCC 1484
Query 1386 CGACTGCGGCAAGGCCTTCCGCCACAAACCCTACCTGGCGGCGCACCGGCGCATCCACACCGGCGAGAAGCCCT 1459
.||||||||||||||.|||||||||||.|||||||||||.||||||||.|||||||||||.||||||||.||||
Sbjct 1485 GGACTGCGGCAAGGCTTTCCGCCACAAGCCCTACCTGGCTGCGCACCGACGCATCCACACAGGCGAGAAACCCT 1558
Query 1460 ACGTCTGCCCCGACTGCGGCAAAGCCTTCAGCCAGAAGTCCAACCTGGTGTCGCACCGGCGCATCCACACGGGC 1533
|.||.||.||||||||.||||||||.|||||.||||||||||||||||||||.|||||||||||||||||.|||
Sbjct 1559 ATGTGTGTCCCGACTGTGGCAAAGCTTTCAGTCAGAAGTCCAACCTGGTGTCCCACCGGCGCATCCACACAGGC 1632
Query 1534 GAGCGGCCCTACGCCTGTCCCGACTGCGACCGCAGCTTCAGCCAGAAGTCCAACCTCATCACCCACCGCAAGAG 1607
|||||||||||||||||.||||||||.||.||.||||||||.|||||||||||.||.|||||.|||||.|||||
Sbjct 1633 GAGCGGCCCTACGCCTGCCCCGACTGTGATCGTAGCTTCAGTCAGAAGTCCAATCTTATCACACACCGGAAGAG 1706
Query 1608 CCACATCCGGGACGGCGCCTTCTGCTGTGCCATCTGTGGCCAGACCTTCGACGACGAGGAGAGACTCCTGGCCC 1681
||||||||||||.|||||||||||.|||||||||||||||||||||||.||.||||||||..|||||.||...|
Sbjct 1707 CCACATCCGGGATGGCGCCTTCTGTTGTGCCATCTGTGGCCAGACCTTTGATGACGAGGACCGACTCTTGATGC 1780
Query 1682 ACCAGAAGAAGCACGATGTC 1701
|||||||||||||.||||.|
Sbjct 1781 ACCAGAAGAAGCATGATGCC 1800