Nucleotide Global Alignment
Description
- Query:
- TRCN0000468268
- Subject:
- NM_006300.4
- Aligned Length:
- 2121
- Identities:
- 1220
- Gaps:
- 702
Alignment
Query 1 ATGACCACGTTGAAGGAGGCAGTGACCTTCAAGGACGTGGCTGTGGTCTTCACTGAGGAAGAGCTGAGGCTGCT 74
||||||||.||.|||||||||||||||||||||||.|||||||||.|||||||||||||.||.|||.||||.||
Sbjct 1 ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGATGTGGCTGTGTTCTTCACTGAGGAGGAACTGGGGCTACT 74
Query 75 GGACCTTGCCCAGAGGAAACTGTACCGAGAAGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGGCATC 148
|||||.||||||||||||.|||||||.|||.||||||||.||||||||||.|||||||||.|||||||||||||
Sbjct 75 GGACCCTGCCCAGAGGAAGCTGTACCAAGACGTGATGCTTGAGAACTTCACGAACCTGCTGTCAGTGGGGCATC 148
Query 149 AATCACTCCACAGAGATACTTTCCACTTCCTAAAGGAAGAAAAGTTTTGGATGATGGAGACAGCAACCCAAAGA 222
||.||.||||| .|||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AACCATTCCAC------CCTTTCCACTTCCTAAGGGAAGAAAAGTTTTGGATGATGGAGACAGCAACCCAAAGA 216
Query 223 GAAGGGAATTTAGGAGGCAAGATCCAAATGGAGATGGAGACTGTTTCAGAATCAGGAACACATGAAGGCTTG-- 294
|||||.||||.|||.|||| |||||.||.|.|||.|||||.|||||||||.| ||
Sbjct 217 GAAGGAAATTCAGGCGGCA------------------AGACTATTGCGGAAGCAGGACCACATGAAGAC-TGCC 271
Query 295 -TTCAGTCATCAAACCTGGGAACAAATTTCAAGTGACTTAACCAGGTTTCAAGACTCCATGGTAAACAGCTTTC 367
|| |.||.||||.|||||||||||.|.||||||||||||||..||.||||||||||||..||||.|..|.||
Sbjct 272 CTT--GCCAGCAAATCTGGGAACAAACTGCAAGTGACTTAACCCAGTCTCAAGACTCCATCATAAATAATTCTC 343
Query 368 AGTTCTCCAAACAAGATGATATGCCCTGCCAGGTTGATGCAGGACTATCTATAATTCACGTAAGACAGAAACCT 441
|.||||...||||||.||||.|.||||.|||||||||.||||||||||||||||||||...|.|||||||||||
Sbjct 344 ACTTCTTTGAACAAGGTGATGTCCCCTCCCAGGTTGAGGCAGGACTATCTATAATTCATACAGGACAGAAACCT 417
Query 442 TCTGAGGGTAGGACGTGTAAAAAGTCCTTTAGTGATGTCTCCGTCCTTGATCTTCATCAACAACTACAGTCAAG 515
||..||..|.|||.|||||||.|||||||.||||||||..||.||.||||||.||.|||.||..|.||.|||.|
Sbjct 418 TCACAGAATGGGAAGTGTAAACAGTCCTTCAGTGATGTTGCCATCTTTGATCCTCCTCAGCAGTTCCACTCAGG 491
Query 516 AGAGAAGTCTCATACATGTGATGAATGTGGAAAGAGTTTCTGTTATAGCTCAGCTCTTCGTATTCATCAGAGAG 589
||||||||||||||||||..||||.||||||||.||.||||||||.|.||||||||||||||||||.|||||||
Sbjct 492 AGAGAAGTCTCATACATGCAATGAGTGTGGAAAAAGCTTCTGTTACATCTCAGCTCTTCGTATTCACCAGAGAG 565
Query 590 TTCACATGGGGGAGAAACTCTATAATTGTGATGTGTGTGGTAAGGAATTCAATCAGAGCTCACATCTGCAAATT 663
|||||.||.|.||||||||||.|||.|||||..||.|||||||||||||||.||||||||||..||||||||.|
Sbjct 566 TTCACTTGAGAGAGAAACTCTCTAAGTGTGACATGCGTGGTAAGGAATTCAGTCAGAGCTCATGTCTGCAAACT 639
Query 664 CATCAGAGAATCCACACTGGAGAGAAACCATTCAAATGTGAGCAGTGTGGGAAAGGCTTTAGTCGTAGATCAGG 737
|.|.|||||.||||||||||||||||||||||||||||||||||.||||||||||||||.||..|||||.|...
Sbjct 640 CGTGAGAGAGTCCACACTGGAGAGAAACCATTCAAATGTGAGCAATGTGGGAAAGGCTTCAGATGTAGAGCGAT 713
Query 738 ACTTTATGTTCATCGTAAATTACACACAGGAGTGAAACCTCATATTTGTGAGAAATGTGGGAAGGCCTTCATTC 811
||||.|.|||||..|.||||||||||||||||.|||||||.|||||||||||||||||||||.|||||||||||
Sbjct 714 ACTTCAAGTTCACTGCAAATTACACACAGGAGAGAAACCTTATATTTGTGAGAAATGTGGGAGGGCCTTCATTC 787
Query 812 ATGATTCCCAGCTTCAGGAACATCAAAGAATCCATACTGGGGAGAAGCCATTCAAATGTGATATATGTTGTAAG 885
|.||||.||||||||||.|||||||.|.|||.|||||||||||||||||.|||||||||||.||||||.|||||
Sbjct 788 ACGATTTCCAGCTTCAGAAACATCAGATAATTCATACTGGGGAGAAGCCGTTCAAATGTGAAATATGTGGTAAG 861
Query 886 AGCTTCCGTAGTAGAGCAAATCTTAATAGGCATTCCATGGTTCACATGCGAGAGAAACCATTCAGATGTGATAC 959
||||||.|...|||..|||.||||||||||||||
Sbjct 862 AGCTTCTGCCTTAGGTCAAGTCTTAATAGGCATT---------------------------------------- 895
Query 960 ATGTGGTAAGAGCTTTGGTCTGAAATCAGCACTTAATAGTCATCGCATGGTCCACACAGGAGAGAAACGGTACA 1033
|||||||||||||||.||||||||.|||||
Sbjct 896 --------------------------------------------GCATGGTCCACACAGCAGAGAAACTGTACA 925
Query 1034 AATGTGAGGAATGTGGAAAACGCTTCATTTATAGGCAAGATCTTTATAAGCATCAGATAGACCACACAGGGGAG 1107
|||.||||||.|||||||||.||||||.|.||||.|.||||.|..||||||||||||||...||||||||..||
Sbjct 926 AATCTGAGGAGTGTGGAAAAGGCTTCACTGATAGCCTAGATTTGCATAAGCATCAGATAATTCACACAGGACAG 999
Query 1108 AAGCCATATAATTGTAAAGAATGTGGAAAGAGCTTCAGATGGGCCTCAGGTCTTTCAAGACATGTGCGAGTCCA 1181
||.||.||.|||||||||||||||||.|||||||||||||||.|||||
Sbjct 1000 AAACCGTACAATTGTAAAGAATGTGGGAAGAGCTTCAGATGGTCCTCA-------------------------- 1047
Query 1182 CAGTGGAGAGACAACATTCAAATGTGAAGAATGTGGGAAGGGATTTTATACAAATTCACAACGTTATTCTCACC 1255
Sbjct 1048 -------------------------------------------------------------------------- 1047
Query 1256 AGAGAGCGCACAGTGGAGAAAAGCCATATAGATGTGAGGAGTGTGGGAAGGGCTACAAAAGGAGGTTGGATCTT 1329
Sbjct 1048 -------------------------------------------------------------------------- 1047
Query 1330 GACTTTCATCAGAGGGTCCACAGAGGAGAGAAACCCTATAATTGTAAGGAATGTGGGAAGAGCTTTGGCTGGGC 1403
Sbjct 1048 -------------------------------------------------------------------------- 1047
Query 1404 CTCGTGTCTTTTGAATCATCAGAGAATCCACAGTGGAGAAAAACCATTTAAATGTGAAGAATGTGGGAAAAGAT 1477
|.||||||||..||||||.||||||||||||||||||||
Sbjct 1048 ----TATCTTTTGATCCATCAGCGAATCCACAGTGGAGAAAAA------------------------------- 1086
Query 1478 TTACTCAGAATTCACAACTTTATACCCATCGTAGAGTCCACAGTGGAGAAAAACCATTCAAATGTGAAGAGTGT 1551
Sbjct 1087 -------------------------------------------------------------------------- 1086
Query 1552 GGGAAAAGATTTACTCAGAATTCACAACTTTATTCTCATCGCAGAGTCCACACTGGAGTAAAGCCATACAAATG 1625
|||||||.|||
Sbjct 1087 ---------------------------------------------------------------CCATACAGATG 1097
Query 1626 TGAAGAGTGTGGGAAGGGCTTCAACAGTAAGTTTAATCTTGACATGCACCAGAGGGTCCACACCGGAGAGAGAC 1699
|||.||||||||||||||||.||..|||||||....||||.||.||||||||||||||||.||.||||||||||
Sbjct 1098 TGAGGAGTGTGGGAAGGGCTACATTAGTAAGTCAGGTCTTAACTTGCACCAGAGGGTCCATACTGGAGAGAGAC 1171
Query 1700 CTTATAATTGTAAAGAATGTGGGAAGAGCTTTAGCCGGGCCTCAAGTATTTTGAATCATAAGAGACTCCATGGT 1773
|||||||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||.|||||
Sbjct 1172 CTTATAATTGTAAGGAATGTGGGAAGAGCTTTAGCCGGGCTTCAAGTATTTTGAATCATAAGAAACTCC----- 1240
Query 1774 GATGAAAAGCCATTCAAATGTGAAGAGTGTGGGAAGAGATTTACTGAGAATTCACAGCTTCATTCCCATCAGAG 1847
|||| ||
Sbjct 1241 ------------------------------------------ACTG------------------CC-------- 1246
Query 1848 GGTTCACACTGGGGAAAAGCCATACAAATGTGAGAAGTGTGGAAAGAGCTTCAGATGGGCCTCAACTCATCTAA 1921
|||||| ||
Sbjct 1247 ------------GGAAAA------------------------------------------------------AA 1254
Query 1922 CCCATCAGAGACTCCACAGTAGAGAAAAACTACTTCAATGTGAGGACTGTGGGAAGAGCATTGTGCACAGTTCA 1995
|||.||| ||||||||||.|||||.|||||..||||.|||.|.||.
Sbjct 1255 CCCTTCA-----------------------------AATGTGAGGATTGTGGAAAGAGGCTTGTACACCGGTCT 1299
Query 1996 TGCCTTAAAGACCAACAAAGAGACCAAAGTGGAGAGAAAACATCTAAATGTGAGGACTGTGGGAAGCGCTACAA 2069
|.|..|||||||||||||.|||||||.|.||||||.||..||||.|||||||||||||||||||||||||||||
Sbjct 1300 TTCTGTAAAGACCAACAAGGAGACCACAATGGAGAAAACTCATCCAAATGTGAGGACTGTGGGAAGCGCTACAA 1373
Query 2070 GAGGCGCTTGAATCTTGATACGCTTTTGTCATTATTTTTAAATGACACA 2118
|||||||||||||||.||||...||||.|||||||||||||||||.|..
Sbjct 1374 GAGGCGCTTGAATCTGGATATAATTTTATCATTATTTTTAAATGATATG 1422
