Nucleotide Global Alignment

Description

Query:
TRCN0000468437
Subject:
XR_001755164.1
Aligned Length:
2443
Identities:
641
Gaps:
1801

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGCGCGCGGGCGCGGCACCCGGAAGTCGGCGGCGGTGGCGGAGGCGACCTCGCGACCTGTGTCAGCAGAGCCGC  74

Query    1  -----------ATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAAAAACGCGT-----------  52
                       ||||||||||||||||||||||||||||||||||||||||||||||||||||           
Sbjct   75  CCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAAAAACGCGTACAGGTAACCC  148

Query   53  --------------------------------------------------------------------------  52
                                                                                      
Sbjct  149  CCTCGCTCTGCATCTGCTGCGCCCTGCAGGGTCCTGGGTGCCCAGCCAGTTCTCATGCCACCCAAGCTGCTGTG  222

Query   53  --------------------------------------------------------------------------  52
                                                                                      
Sbjct  223  TGCAGGAAGGTGTGTGGGCCAGGACGGGGCTGCACAGGCCTGGCACTGCCCTCCAGGACAGGGTCACTCAGTGT  296

Query   53  --------------------------------------------------------------------------  52
                                                                                      
Sbjct  297  GGGATGCTGTCAGAATGCCTCTCGGGGCGGGGACTCCAGTCAATGTACAAAGACGTGAAGACTCAGCCACAGAA  370

Query   53  -------ACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCTG  119
                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGCAGCCACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCTG  444

Query  120  GGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATCA  193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATCA  518

Query  194  GCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGGT  267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct  519  GCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCG----  588

Query  268  GAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGTCCTACCTGAAGAAGGTCTCTATGGAGGGCCA  341
                                                                                      
Sbjct  589  --------------------------------------------------------------------------  588

Query  342  TCTGTACAATGGCTTCAACCTCATAGCAGCCAACCTGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGGA  415
                                                                                      
Sbjct  589  --------------------------------------------------------------------------  588

Query  416  ACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCC  489
                                              ||||||||||||||||||||||||||||||||||||||||
Sbjct  589  ----------------------------------AGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCC  628

Query  490  TGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGT  563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  629  TGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGT  702

Query  564  GCTCATCGCCAGCCTCCTGGATGTGCTCAACAATAAAGAGGC-----------------------GCAGCTGCC  614
            ||||||||||||||||||||||||||||||||||.|||||||                       |||||||||
Sbjct  703  GCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAAGAGGCGTGAGTGGGCGGGTCCTGCTGGGGCAGCTGCC  776

Query  615  AGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTGC  688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  777  AGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGGCTGTGTGCGTGC  850

Query  689  GCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGAG  762
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  851  GCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGAG  924

Query  763  CGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGC--------  828
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct  925  CGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCAGAGCTAACCCCA  998

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct  999  CCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTGC  1072

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1073  CATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCAT  1146

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1147  CTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAGG  1220

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1221  ACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCACTCTTGCACATGTACACAGGCACTCACATG  1294

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1295  GCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAGCCATATACATGGACACCGACACAGGCACA  1368

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1369  TGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTGCACAGACACACACACACAGGTGCACACAC  1442

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1443  ACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTCC  1516

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1517  AACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGAC  1590

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1591  TCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTGGAATTGGGCACCGAGAAGACCTGAGAAAA  1664

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1665  ACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGAT  1738

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1739  CTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATTA  1812

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1813  CAGGCGTGTGCCACCATGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCT  1886

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1887  GGTCTTGAACTCCTGACGTGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACC  1960

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1961  ACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTGTGCC  2034

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2035  AGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAATCCC  2108

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2109  GCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAGG  2182

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2183  TGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGAGCGC  2256

Query  829  -  828
             
Sbjct 2257  A  2257

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