Nucleotide Global Alignment
Description
- Query:
- TRCN0000468488
- Subject:
- XM_017000077.1
- Aligned Length:
- 2937
- Identities:
- 1481
- Gaps:
- 1377
Alignment
Query 1 ATGCCCCGTGCCCCCCACTTCATGCCCTTGCTGCTACTGCTGCTGCTGCTCTCACTTCCCCATACTCAGGCCGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCCCCGTGCCCCCCACTTCATGCCCTTGCTGCTACTGCTGCTGCTGCTCTCACTTCCCCATACTCAGGCCGC 74
Query 75 CTTTCCCCAGGACCCCCTCCCTCTGTTGATCTCTGACCTTCAAGGTACTTCCCCATTATCCTGGTTTCGGGGCC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTTTCCCCAGGACCCCCTCCCTCTGTTGATCTCTGACCTTCAAGGTACTTCCCCATTATCCTGGTTTCGGGGCC 148
Query 149 TGGAGGATGATGCTGTGGCTGCAGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTGCTA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGAGGATGATGCTGTGGCTGCAGAACTTGGGCTGGACTTTCAGAGATTCCTGACCTTGAACCGGACCTTGCTA 222
Query 223 GTGGCTGCCCGGGATCACGTTTTCTCCTTCGATCTTCAAGCCGAAGAAGAAGGGGAGGGGCTGGTGCCCAACAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTGGCTGCCCGGGATCACGTTTTCTCCTTCGATCTTCAAGCCGAAGAAGAAGGGGAGGGGCTGGTGCCCAACAA 296
Query 297 GTATCTAACATGGAGAAGCCAAGATGTGGAGAACTGTGCTGTACGGGGAAAGCTGACGGATGAGTGCTACAACT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTATCTAACATGGAGAAGCCAAGATGTGGAGAACTGTGCTGTACGGGGAAAGCTGACGGATGAGTGCTACAACT 370
Query 371 ATATTCGTGTTCTTGTTCCCTGGGACTCCCAGACGCTCCTTGCCTGTGGAACGAACTCATTCAGCCCTGTGTGC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATATTCGTGTTCTTGTTCCCTGGGACTCCCAGACGCTCCTTGCCTGTGGAACGAACTCATTCAGCCCTGTGTGC 444
Query 445 CGCAGCTATGGGATAACTTCGCTGCAGCAGGAGGGTGAGGAACTGAGTGGGCAGGCTCGATGCCCCTTTGATGC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGCAGCTATGGGATAACTTCGCTGCAGCAGGAGGGTGAGGAACTGAGTGGGCAGGCTCGATGCCCCTTTGATGC 518
Query 519 CACCCAGTCCAACGTGGCCATCTTTGCAGAGGGCAGCCTGTACTCAGCCACAGCTGCGGATTTCCAGGCCAGTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACCCAGTCCAACGTGGCCATCTTTGCAGAGGGCAGCCTGTACTCAGCCACAGCTGCGGATTTCCAGGCCAGTG 592
Query 593 ATGCTGTAGTTTACAGAAGCCTTGGGCCCCAGCCCCCACTCCGCTCCGCCAAGTATGACTCCAAGTGGCTCCGA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATGCTGTAGTTTACAGAAGCCTTGGGCCCCAGCCCCCACTCCGCTCCGCCAAGTATGACTCCAAGTGGCTCCGA 666
Query 667 GAGCCACACTTTGTCCAGGCCTTGGAGCATGGAGACCATGTCTACTTCTTCTTCCGCGAGGTCTCTGTGGAGGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAGCCACACTTTGTCCAGGCCTTGGAGCATGGAGACCATGTCTACTTCTTCTTCCGCGAGGTCTCTGTGGAGGA 740
Query 741 TGCTCGGCTGGGGAGGGTGCAGTTCTCCCGCGTAGCCCGAGTATGTAAACGTGACATGGGCGGCTCGCCTCGGG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGCTCGGCTGGGGAGGGTGCAGTTCTCCCGCGTAGCCCGAGTATGTAAACGTGACATGGGCGGCTCGCCTCGGG 814
Query 815 CCTTGGACCGCCACTGGACATCCTTCCTGAAGCTTCGGCTCAACTGCTCTGTCCCTGGGGACTCTACTTTCTAT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCTTGGACCGCCACTGGACATCCTTCCTGAAGCTTCGGCTCAACTGCTCTGTCCCTGGGGACTCTACTTTCTAT 888
Query 889 TTTGATGTTTTACAGGCCTTGACTGGGCCTGTGAACCTGCATGGCCGCTCTGCTCTCTTTGGGGTCTTCACCAC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTTGATGTTTTACAGGCCTTGACTGGGCCTGTGAACCTGCATGGCCGCTCTGCTCTCTTTGGGGTCTTCACCAC 962
Query 963 CCAGACCAATAGCATCCCTGGCTCTGCCGTCTGCGCCTTCTACCTGGATGAGATTGAGCGTGGGTTTGAGGGCA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCAGACCAATAGCATCCCTGGCTCTGCCGTCTGCGCCTTCTACCTGGATGAGATTGAGCGTGGGTTTGAGGGCA 1036
Query 1037 AGTTCAAGGAGCAGAGGAGTCTGGATGGGGCCTGGACTCCTGTGTCTGAGGACAGAGTTCCCTCACCCAGGCCA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGTTCAAGGAGCAGAGGAGTCTGGATGGGGCCTGGACTCCTGTGTCTGAGGACAGAGTTCCCTCACCCAGGCCA 1110
Query 1111 GGATCCTG---------------------------------------------CCCTG---------------- 1123
|||||||| |||||
Sbjct 1111 GGATCCTGTGCAGGAGTAGGGGGAGCTGCCTTGTTCTCCTCTTCCCGAGACCTCCCTGATGATGTCCTGACCTT 1184
Query 1124 ----------------------------------------------------------CTCACTC--------- 1130
|||||||
Sbjct 1185 CATCAAGGCTCACCCGCTGCTGGACCCCGCTGTACCACCTGTCACCCATCAGCCTCTACTCACTCTCACTAGCA 1258
Query 1131 ----------GA---------------------------GTCCCCTC--------------------------- 1140
|| ||||||.|
Sbjct 1259 GGGCCCTACTGACCCAAGTAGCTGTGGATGGCATGGCTGGTCCCCACAGTAACATCACAGTCATGTTCCTTGGC 1332
Query 1141 ---------GGG----------AGGTCC---CTCCAGGT-----ACTCCGGGGGTCCCGGGAAGC---ACCTCC 1184
||| ||||.| |.|||||| | ||||||||.||.| ||| .|||||
Sbjct 1333 TCCAATGATGGGACAGTGCTGAAGGTGCTGACCCCAGGTGGGCGA-TCCGGGGGACCTG---AGCCCATCCTCC 1402
Query 1185 TGTA-------------------CCTG------------------GGCCGGCCC-------------------- 1201
||.| |||| ||.|.||||
Sbjct 1403 TGGAAGAGATTGATGCCTACAGCCCTGCCCGGTGCAGTGGGAAGCGGACAGCCCAAACAGCACGACGGATCATA 1476
Query 1202 ------------------GAGGG------------------------------------CTACC---------- 1211
||||| |||||
Sbjct 1477 GGGCTGGAGCTGGACACTGAGGGTCACAGGCTTTTTGTGGCTTTTTCTGGCTGTATTGTCTACCTCCCTCTCAG 1550
Query 1212 ----------------GGGGCC-------------------------------------------------GCG 1220
|||||| ||.
Sbjct 1551 CCGGTGTGCCCGGCATGGGGCCTGTCAGAGGAGCTGTTTGGCTTCTCAGGACCCATACTGTGGATGGCATAGCT 1624
Query 1221 CC-----CTG-------AAAAGGG----TG--------GACGTCGAGAAGCC------CCAGTTGTCCCTGAAG 1264
|| ||| |..|||| || ||.||.||..||.| ||||...|||.||.||
Sbjct 1625 CCAGGGGCTGTGTGGATATCAGGGGATCTGGTGGGACTGATGTGGATCAGGCTGGGAACCAGGAATCCATGGAG 1698
Query 1265 C-------CTCCC---------CT----------CGTCGGGCCC-----------------TCCTCCCG---CC 1292
| ||.|| || .|||.||||| |.||.||| ||
Sbjct 1699 CATGGTGACTGCCAAGATGGAGCTACTGGGAGTCAGTCTGGCCCTGGGGATTCTGCTTATGTGCTTCCGGGTCC 1772
Query 1293 AGGCC------------------GTC------------CCGAACGGCGGCC---GT-TTCAACTTTTAAAG--- 1329
.|||| ||| ||.|.|..||||| || |||.|||.||..||
Sbjct 1773 TGGCCCTTCCCCTGGGACCCCCAGTCCTCCCAGTGATGCCCACCCCCGGCCCCAGTCTTCCACTCTTGGAGTTC 1846
Query 1330 ------GGAGCGGTCCACG------GCCTCCAGCGTGGGGAGCGCCCG---------------AGTCCTCTCGG 1376
||.|||..|..|| |||.|||||.|.|| .|.|||| |.|||||..||
Sbjct 1847 ACACTCGGGGCGTGCGCCGGGACCTGCCCCCAGCCTCGG--CCTCCCGCTCCGTCCCCATCCCACTCCTCCTGG 1918
Query 1377 CCA-------CG-AG--------CTGGACGCTCTTCAGGACGTTTCACCGCCCCC-----------------TC 1417
||| || || |||| ||.|.|||| ||.|.|.||.| ||
Sbjct 1919 CCAGTGTGGCCGCAGCTTTTGCCCTGG--GCGCCTCAG------TCTCTGGCCTCCTGGTCTCCTGTGCTTGTC 1984
Query 1418 GCCCCGCACCTCCAGCCTTCCCGAC-TC---GCA--------GAGTCTCCCGAGGC-------CCCT-TTTCGC 1471
|||.||| ||| ||||| || ||| |||.|| |||.||| |||| |.|| |
Sbjct 1985 GCCGCGC----CCA------CCGACGTCGGGGCAAGGACATCGAGACT-CCGGGGCTCCCGCGCCCTCTCTC-C 2046
Query 1472 CTCGG--GTTTATTTATTG----------ACTGT-------------CTTTCCCCCTGTCCTCGACAGAAGAGT 1520
|||.| || ||| ||.|| | |||.|.|.||||.| |.||..
Sbjct 2047 CTCCGCAGT-------TTGGCCCGGCTCCACGGTGGGGGCCCAGAGCC---CCCGCCGCCCTCCA---AGGACG 2107
Query 1521 GGGA---GGTG-AGAAGCC-CGTCTCCTCAGTGAGCCAGCATTTC-------------AGGG------------ 1564
|||| |||| |||.||| |..|||..|| |||.| ||| ||||
Sbjct 2108 GGGACGCGGTGCAGACGCCGCAGCTCTACA-----CCACC--TTCCTGCCGCCTCCGGAGGGCGTGCCCCCGCC 2174
Query 1565 GGAGCTGGCGGACT-----CCCACTCCCCG-CTCC---------CTTCCAGCCAAGCTGCCT------------ 1611
||||||||| || ||||| ||||| .||| ||.||.|.||||| .|||
Sbjct 2175 GGAGCTGGC---CTGCCTGCCCAC-CCCCGAGTCCACGCCGGAGCTGCCGGTCAAGC-ACCTCCGCGCCGCCGG 2243
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2244 GGACCCCTGGGAGTGGAACCAGAACAGGAACAACGCCAAGGAGGGTCCGGGCCGCTCACGGGGCGGGCACGCGG 2317
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2318 CGGGCGGGCCCGCGCCCCGCGTGCTGGTGAGGCCACCGCCGCCCGGCTGTCCCGGGCAGGCCGTGGAAGTCACC 2391
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2392 ACCCTGGAGGAACTGCTGCGCTACCTGCACGGCCCGCAGCCGCCCAGAAAGGGGGCCGAGCCCCCCGCCCCTTT 2465
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2466 AACCTCGCGGGCGCTCCCGCCGGAGCCCGCCCCCGCCCTCTTGGGCGGCCCCAGCCCCAGGCCCCACGAGTGCG 2539
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2540 CCTCGCCGCTGAGGCTGGACGTGCCCCCCGAGGGCAGGTGCGCCTCTGCCCCCGCCCGGCCCGCGCTCTCCGCC 2613
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2614 CCCGCTCCCCGGCTGGGCGTCGGCGGAGGCCGGAGGTTGCCTTTCTCCGGCCACCGGGCCCCCCCTGCCCTGCT 2687
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2688 CACTCGAGTCCCCTCGGGAGGTCCCTCCAGGTACTCCGGGGGTCCCGGGAAGCACCTCCTGTACCTGGGCCGGC 2761
Query 1612 -------------------------------------------------------------------------- 1611
Sbjct 2762 CCGAGGGCTACCGGGGCCGCGCCCTGAAAAGGGTGGACGTCGAGAAGCCCCAGTTGTCCCTGAAGCCTCCCCTC 2835
Query 1612 --------------------------------------------------- 1611
Sbjct 2836 GTCGGGCCCTCCTCCCGCCAGGCCGTCCCGAACGGCGGCCGTTTCAACTTT 2886
